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The map label for this gene is yezC [H]

Identifier: 118478564

GI number: 118478564

Start: 3126283

End: 3126723

Strand: Reverse

Name: yezC [H]

Synonym: BALH_2940

Alternate gene names: 118478564

Gene position: 3126723-3126283 (Counterclockwise)

Preceding gene: 118478566

Following gene: 118478563

Centisome position: 59.48

GC content: 34.92

Gene sequence:

>441_bases
ATGGATGATACAGATTTAAAGATTCTTTCTCATCTTCAGGAAAATGCACGTTTAAGTATGGTTGAAATAGGAAAACTGGT
GGGTTTGAGTTCTCCTTCTGTTACAGAGCGAGTTAGAAGACTAGAAGAACAGGGGGTAATTATAAGTTATCGCACGATTG
TTAATCCGAAAGAATTAAAAAAACATATTACTGCGTTTGTTTTGATGGAACCAAGGGATTGCAACAAATATAAAAAGTTT
GCAATGGAACATTCAGATGTGGTTGAATGTCACCGTATTGCCGGTATGTATAGTTATCTAACAAAGGTAGTGACGGAATC
TGTACATACACTCGAAGACTATATTAATTTGTGCTTAGAGTATGGAAAGCCTACAACCTTGATAGTGCTTTCTTCTCCAG
TAGAACATAAATCATTTTTTACAGAGAGTGAAAAACTTTAA

Upstream 100 bases:

>100_bases
AAAAAGATAACATGCTATAATTTATGTATTAATTATAATTTTCTTAAAGAATTTAAGAATTATTAAATGTTTTCTTAATT
AATCAAGGGGAGGCCAAGCA

Downstream 100 bases:

>100_bases
TTACATATGAGTGATTATCCAAAATAAAAAGCGTAAAATTAATGCCTAATGGGAAATAGAGTCCTATTAGGCATTAATTT
TCAGAAAATTATTTAGAAAA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MDDTDLKILSHLQENARLSMVEIGKLVGLSSPSVTERVRRLEEQGVIISYRTIVNPKELKKHITAFVLMEPRDCNKYKKF
AMEHSDVVECHRIAGMYSYLTKVVTESVHTLEDYINLCLEYGKPTTLIVLSSPVEHKSFFTESEKL

Sequences:

>Translated_146_residues
MDDTDLKILSHLQENARLSMVEIGKLVGLSSPSVTERVRRLEEQGVIISYRTIVNPKELKKHITAFVLMEPRDCNKYKKF
AMEHSDVVECHRIAGMYSYLTKVVTESVHTLEDYINLCLEYGKPTTLIVLSSPVEHKSFFTESEKL
>Mature_146_residues
MDDTDLKILSHLQENARLSMVEIGKLVGLSSPSVTERVRRLEEQGVIISYRTIVNPKELKKHITAFVLMEPRDCNKYKKF
AMEHSDVVECHRIAGMYSYLTKVVTESVHTLEDYINLCLEYGKPTTLIVLSSPVEHKSFFTESEKL

Specific function: Mediates A Global Response To Leucine. Exogenous Leucine Affects The Expression Of A Number Of Different Operons; Lrp Mediates This Effect For At Least Some Of These Operons. For Example It Is Regulator Of The Branched-Chain Amino Acid Transport Genes. [

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=107, Percent_Identity=36.4485981308411, Blast_Score=70, Evalue=6e-14,
Organism=Escherichia coli, GI1790182, Length=141, Percent_Identity=30.4964539007092, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR000835
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16761; Mature: 16761

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDTDLKILSHLQENARLSMVEIGKLVGLSSPSVTERVRRLEEQGVIISYRTIVNPKELK
CCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEHHCCHHHHH
KHITAFVLMEPRDCNKYKKFAMEHSDVVECHRIAGMYSYLTKVVTESVHTLEDYINLCLE
HHHHHHEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGKPTTLIVLSSPVEHKSFFTESEKL
CCCCEEEEEECCCCHHHHHHCCCCCC
>Mature Secondary Structure
MDDTDLKILSHLQENARLSMVEIGKLVGLSSPSVTERVRRLEEQGVIISYRTIVNPKELK
CCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEEEEHHCCHHHHH
KHITAFVLMEPRDCNKYKKFAMEHSDVVECHRIAGMYSYLTKVVTESVHTLEDYINLCLE
HHHHHHEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGKPTTLIVLSSPVEHKSFFTESEKL
CCCCEEEEEECCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]