| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is hypF [H]
Identifier: 118478561
GI number: 118478561
Start: 3122046
End: 3124427
Strand: Reverse
Name: hypF [H]
Synonym: BALH_2937
Alternate gene names: 118478561
Gene position: 3124427-3122046 (Counterclockwise)
Preceding gene: 118478562
Following gene: 118478560
Centisome position: 59.43
GC content: 32.16
Gene sequence:
>2382_bases TTGAGTTATTATATGGGGCAGAATTACCTCGATTATGTTAGGAGACAATTTATGAAAAAAGTAATAAATATGTTTATAAA AAAGTATCAAGTTAAAGGCATTGTGCAAGGTGTTGGTTTTAGACCTTTCGTATATAGAATAGCAAAAAAATATGATCTAA ACGGATGGGTGTTAAATGATTCAAATGGAGTGCTGATAGAAGTAGAAGGGGAACAAAATAATATTACACTTTTTATTCAT GATATAGAATTTAATTCCCCAGAATTGGCTTATGTGCAAGAGGTTAAATTGATAGAGGAACAAGAATCCAATAATCGTTA TAGCTCTTTTGATATTTTGAGTAGCCAAAAACATAGCAGTAGACAAACTTTAATATCTCCTGATACTTATGTATGTAATG AATGTTTAGAAGAATTATTTGATCCAACGAATAGAAGGTTTCGTTATCCATTTATTAATTGTACAAATTGTGGACCTAGA TATTCAATAATAAAAGATATTCCTTATGATAGACCGTATACTACAATGGTAAAATTTCCTATGTGCAAAGAGTGTGATAA AGAATACAAAGACATATTGGATCGGAGATTCCATGCACAACCAAATGCTTGCTGGAAATGTGGACCACAAGTTCAATTGA AAACAGCAGATGGTACAAATGTCCCCACTGATAATCCAATAGAGAAAACTATTGATTTGTTAAAAAAGGGGAAAATCCTA GCTATTAAAGGGTTAGGTGGATATCACTTAGTTGTAGATCCAATGAATCATGAAGCTGTAAAAGAATTAAGAAAAAGAAA AAAACGGGATGAAAAACCTTTTGCTTTAATGTCATCTCAATTAGATGATGTGAAAAATTTTGCTGAAATAACAAAAAATG AAGAAGCTTTATTAGTATCTAAAGAACGGCCAATTGTGCTATTGAACAAAAAGGAAAATGAGTATATTTCTTCAGATGTT GCACCTAATAATAATACCTATGGGGTAATGTTAGCCTATACACCACTTCATCATCTCATTTTAAGAGGGAATTTTCTTGC ATTAATAGCTACGAGCGCCAATGTTTCTGATGAACCAATTGTATATAAAGATGGAGATGCAATTGAGCAGCTAAAAGGAA TTGCAGATTATTATTTAGTACACAATAGGGAGATATTCACTAGAGTAGATGACTCTATTGTTAGGGGTATTGATTTAGAT GATGAAATAACAAAAATACAAATAATTCGTCGCGCTAGAGGGTATGTACCAAACCCAATTGATTTTAAAGAAGGATCAAC TAATGTACTAGCTTTAGGAGCAGAATTAAAGAATACGATTTGCTTAACTAAAGGTGAAAAAGCTTTTATTAGTCATCATA TTGGCGATTTAAAAAACTATAAAATTTATGAATCATTTAAAAATACTATAGCTCATTTACAAAAAATCTTTGAAATCAGT CCTTCCGTAATAGCAAGTGATCTTCATCCTGATTTTTATAGTACAAAATATGCATTTGATCAAAAAACTTTACCAGTTGT ACAGGTTCAGCATCATCATGCCCACATGGCTTCTTGTATGGTGGATAATCAATTAGATGGTCCTGTTTTAGGAGTTATTT TAGATGGAACGGGTTATGGTGATGATGGGAATATTTGGGGCGGAGAGTTTTTAATCGGTGATTTTCTTAATTATCAAAGA GCGGCATATATCGATTACTTTCAGCTACCAGGCGGTGATAAAGCCGTTAAAGAACCGTATAGAATTGCTTTAGGAATATT GACGCAAATATATGGTGAACAAGTCAAAGAATTACCAATAAAGATAATTTCAGAGCGAAATAATTTTGAACTAGATGTAC TTATAAAAATGATTCAAAAAGGAATTAATTCTCCTCTTACTTCAAGTATGGGAAGGCTTTTTGATGCTGTTTCATCACTA TTGGGTGTCCGTGAAACAGTCCAATATGAAGGACAGGCTGCTATTGAGTTGGAGCAAGCAATTGATATCAATAATTCTTC CAATCCTTTATTATCTTATGAAATAGTTACTTCGAATGGAATTAGAAAAATTGATATAAAACCTATGTTTAAAGAGTTGG TATCTTTGATACTTAAAAATAAGTATACCAAGGGTGAATTAAGCTATCGTTTTCATTATACAATGGTTCAGATGATTACA GAAACCTGTAAACAAATTCGTCAAGAAACAGGGATTAATAAACTAGTTCTTAGTGGGGGAGTATTTTTAAATAAGTTTTT ACTTGTAGAAACCTATAAGTCACTTAAGGCTTGTAAATTCGAGGTTTACATGCACAAACAAGTACCTACCAATGATGGGG GAATCTCTCTTGGTCAAGCAGCAATAGCAGCTCATCGCTATAAAGATACGCATTCAGTATAA
Upstream 100 bases:
>100_bases AATACTAAATATGGTAAAGAAGCTGCGGTAATTGGTAAAGTTACTCAAACAAAAGAAAGACAAGTGCTCATGGAAGCAAA ATCAGGTGAATTGAAACTCA
Downstream 100 bases:
>100_bases AATTTAGGATAGAAATTATATAACTTTTCATTATTCTTTGTGAGTATAGCAAAAAAGAAAAATTAGGAGGTGCTCTTTTA TGGTAGTTAGTTCAAAAATG
Product: hydrogenase maturation protein
Products: NA
Alternate protein names: Carbamoyl phosphate-converting enzyme hypF2; [NiFe]-hydrogenase maturation factor hypF2; Hydrogenase maturation protein hypF2 [H]
Number of amino acids: Translated: 793; Mature: 792
Protein sequence:
>793_residues MSYYMGQNYLDYVRRQFMKKVINMFIKKYQVKGIVQGVGFRPFVYRIAKKYDLNGWVLNDSNGVLIEVEGEQNNITLFIH DIEFNSPELAYVQEVKLIEEQESNNRYSSFDILSSQKHSSRQTLISPDTYVCNECLEELFDPTNRRFRYPFINCTNCGPR YSIIKDIPYDRPYTTMVKFPMCKECDKEYKDILDRRFHAQPNACWKCGPQVQLKTADGTNVPTDNPIEKTIDLLKKGKIL AIKGLGGYHLVVDPMNHEAVKELRKRKKRDEKPFALMSSQLDDVKNFAEITKNEEALLVSKERPIVLLNKKENEYISSDV APNNNTYGVMLAYTPLHHLILRGNFLALIATSANVSDEPIVYKDGDAIEQLKGIADYYLVHNREIFTRVDDSIVRGIDLD DEITKIQIIRRARGYVPNPIDFKEGSTNVLALGAELKNTICLTKGEKAFISHHIGDLKNYKIYESFKNTIAHLQKIFEIS PSVIASDLHPDFYSTKYAFDQKTLPVVQVQHHHAHMASCMVDNQLDGPVLGVILDGTGYGDDGNIWGGEFLIGDFLNYQR AAYIDYFQLPGGDKAVKEPYRIALGILTQIYGEQVKELPIKIISERNNFELDVLIKMIQKGINSPLTSSMGRLFDAVSSL LGVRETVQYEGQAAIELEQAIDINNSSNPLLSYEIVTSNGIRKIDIKPMFKELVSLILKNKYTKGELSYRFHYTMVQMIT ETCKQIRQETGINKLVLSGGVFLNKFLLVETYKSLKACKFEVYMHKQVPTNDGGISLGQAAIAAHRYKDTHSV
Sequences:
>Translated_793_residues MSYYMGQNYLDYVRRQFMKKVINMFIKKYQVKGIVQGVGFRPFVYRIAKKYDLNGWVLNDSNGVLIEVEGEQNNITLFIH DIEFNSPELAYVQEVKLIEEQESNNRYSSFDILSSQKHSSRQTLISPDTYVCNECLEELFDPTNRRFRYPFINCTNCGPR YSIIKDIPYDRPYTTMVKFPMCKECDKEYKDILDRRFHAQPNACWKCGPQVQLKTADGTNVPTDNPIEKTIDLLKKGKIL AIKGLGGYHLVVDPMNHEAVKELRKRKKRDEKPFALMSSQLDDVKNFAEITKNEEALLVSKERPIVLLNKKENEYISSDV APNNNTYGVMLAYTPLHHLILRGNFLALIATSANVSDEPIVYKDGDAIEQLKGIADYYLVHNREIFTRVDDSIVRGIDLD DEITKIQIIRRARGYVPNPIDFKEGSTNVLALGAELKNTICLTKGEKAFISHHIGDLKNYKIYESFKNTIAHLQKIFEIS PSVIASDLHPDFYSTKYAFDQKTLPVVQVQHHHAHMASCMVDNQLDGPVLGVILDGTGYGDDGNIWGGEFLIGDFLNYQR AAYIDYFQLPGGDKAVKEPYRIALGILTQIYGEQVKELPIKIISERNNFELDVLIKMIQKGINSPLTSSMGRLFDAVSSL LGVRETVQYEGQAAIELEQAIDINNSSNPLLSYEIVTSNGIRKIDIKPMFKELVSLILKNKYTKGELSYRFHYTMVQMIT ETCKQIRQETGINKLVLSGGVFLNKFLLVETYKSLKACKFEVYMHKQVPTNDGGISLGQAAIAAHRYKDTHSV >Mature_792_residues SYYMGQNYLDYVRRQFMKKVINMFIKKYQVKGIVQGVGFRPFVYRIAKKYDLNGWVLNDSNGVLIEVEGEQNNITLFIHD IEFNSPELAYVQEVKLIEEQESNNRYSSFDILSSQKHSSRQTLISPDTYVCNECLEELFDPTNRRFRYPFINCTNCGPRY SIIKDIPYDRPYTTMVKFPMCKECDKEYKDILDRRFHAQPNACWKCGPQVQLKTADGTNVPTDNPIEKTIDLLKKGKILA IKGLGGYHLVVDPMNHEAVKELRKRKKRDEKPFALMSSQLDDVKNFAEITKNEEALLVSKERPIVLLNKKENEYISSDVA PNNNTYGVMLAYTPLHHLILRGNFLALIATSANVSDEPIVYKDGDAIEQLKGIADYYLVHNREIFTRVDDSIVRGIDLDD EITKIQIIRRARGYVPNPIDFKEGSTNVLALGAELKNTICLTKGEKAFISHHIGDLKNYKIYESFKNTIAHLQKIFEISP SVIASDLHPDFYSTKYAFDQKTLPVVQVQHHHAHMASCMVDNQLDGPVLGVILDGTGYGDDGNIWGGEFLIGDFLNYQRA AYIDYFQLPGGDKAVKEPYRIALGILTQIYGEQVKELPIKIISERNNFELDVLIKMIQKGINSPLTSSMGRLFDAVSSLL GVRETVQYEGQAAIELEQAIDINNSSNPLLSYEIVTSNGIRKIDIKPMFKELVSLILKNKYTKGELSYRFHYTMVQMITE TCKQIRQETGINKLVLSGGVFLNKFLLVETYKSLKACKFEVYMHKQVPTNDGGISLGQAAIAAHRYKDTHSV
Specific function: Along with hypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carb
COG id: COG0068
COG function: function code O; Hydrogenase maturation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YrdC-like domain [H]
Homologues:
Organism=Escherichia coli, GI2367152, Length=767, Percent_Identity=37.4185136897001, Blast_Score=476, Evalue=1e-135,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001792 - InterPro: IPR017968 - InterPro: IPR004421 - InterPro: IPR017945 - InterPro: IPR006070 - InterPro: IPR011125 [H]
Pfam domain/function: PF00708 Acylphosphatase; PF01300 Sua5_yciO_yrdC; PF07503 zf-HYPF [H]
EC number: NA
Molecular weight: Translated: 90374; Mature: 90243
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: PS00150 ACYLPHOSPHATASE_1 ; PS51160 ACYLPHOSPHATASE_3 ; PS51163 YRDC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYYMGQNYLDYVRRQFMKKVINMFIKKYQVKGIVQGVGFRPFVYRIAKKYDLNGWVLND CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEC SNGVLIEVEGEQNNITLFIHDIEFNSPELAYVQEVKLIEEQESNNRYSSFDILSSQKHSS CCCEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCC RQTLISPDTYVCNECLEELFDPTNRRFRYPFINCTNCGPRYSIIKDIPYDRPYTTMVKFP CCEEECCCHHHHHHHHHHHHCCCCCEEECCEEEECCCCCCCHHHHCCCCCCCCCEEECCC MCKECDKEYKDILDRRFHAQPNACWKCGPQVQLKTADGTNVPTDNPIEKTIDLLKKGKIL CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEE AIKGLGGYHLVVDPMNHEAVKELRKRKKRDEKPFALMSSQLDDVKNFAEITKNEEALLVS EEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE KERPIVLLNKKENEYISSDVAPNNNTYGVMLAYTPLHHLILRGNFLALIATSANVSDEPI CCCCEEEEECCCCCHHCCCCCCCCCCEEEEEEECHHHHHHHCCCEEEEEEECCCCCCCCE VYKDGDAIEQLKGIADYYLVHNREIFTRVDDSIVRGIDLDDEITKIQIIRRARGYVPNPI EECCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC DFKEGSTNVLALGAELKNTICLTKGEKAFISHHIGDLKNYKIYESFKNTIAHLQKIFEIS CCCCCCCCEEEECCHHCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC PSVIASDLHPDFYSTKYAFDQKTLPVVQVQHHHAHMASCMVDNQLDGPVLGVILDGTGYG HHHHHHCCCCCHHCCEEECCCCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC DDGNIWGGEFLIGDFLNYQRAAYIDYFQLPGGDKAVKEPYRIALGILTQIYGEQVKELPI CCCCCCCCHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH KIISERNNFELDVLIKMIQKGINSPLTSSMGRLFDAVSSLLGVRETVQYEGQAAIELEQA HEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH IDINNSSNPLLSYEIVTSNGIRKIDIKPMFKELVSLILKNKYTKGELSYRFHYTMVQMIT CCCCCCCCCEEEEEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHH ETCKQIRQETGINKLVLSGGVFLNKFLLVETYKSLKACKFEVYMHKQVPTNDGGISLGQA HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHH AIAAHRYKDTHSV HHHHHHCCCCCCC >Mature Secondary Structure SYYMGQNYLDYVRRQFMKKVINMFIKKYQVKGIVQGVGFRPFVYRIAKKYDLNGWVLND CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEC SNGVLIEVEGEQNNITLFIHDIEFNSPELAYVQEVKLIEEQESNNRYSSFDILSSQKHSS CCCEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEHHHCCCCCCC RQTLISPDTYVCNECLEELFDPTNRRFRYPFINCTNCGPRYSIIKDIPYDRPYTTMVKFP CCEEECCCHHHHHHHHHHHHCCCCCEEECCEEEECCCCCCCHHHHCCCCCCCCCEEECCC MCKECDKEYKDILDRRFHAQPNACWKCGPQVQLKTADGTNVPTDNPIEKTIDLLKKGKIL CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCEE AIKGLGGYHLVVDPMNHEAVKELRKRKKRDEKPFALMSSQLDDVKNFAEITKNEEALLVS EEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE KERPIVLLNKKENEYISSDVAPNNNTYGVMLAYTPLHHLILRGNFLALIATSANVSDEPI CCCCEEEEECCCCCHHCCCCCCCCCCEEEEEEECHHHHHHHCCCEEEEEEECCCCCCCCE VYKDGDAIEQLKGIADYYLVHNREIFTRVDDSIVRGIDLDDEITKIQIIRRARGYVPNPI EECCCHHHHHHHHHHHHHEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCC DFKEGSTNVLALGAELKNTICLTKGEKAFISHHIGDLKNYKIYESFKNTIAHLQKIFEIS CCCCCCCCEEEECCHHCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC PSVIASDLHPDFYSTKYAFDQKTLPVVQVQHHHAHMASCMVDNQLDGPVLGVILDGTGYG HHHHHHCCCCCHHCCEEECCCCCCCEEEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC DDGNIWGGEFLIGDFLNYQRAAYIDYFQLPGGDKAVKEPYRIALGILTQIYGEQVKELPI CCCCCCCCHHHHHHHHCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH KIISERNNFELDVLIKMIQKGINSPLTSSMGRLFDAVSSLLGVRETVQYEGQAAIELEQA HEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH IDINNSSNPLLSYEIVTSNGIRKIDIKPMFKELVSLILKNKYTKGELSYRFHYTMVQMIT CCCCCCCCCEEEEEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHH ETCKQIRQETGINKLVLSGGVFLNKFLLVETYKSLKACKFEVYMHKQVPTNDGGISLGQA HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCHHHH AIAAHRYKDTHSV HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9799289; 12948488 [H]