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The map label for this gene is hypE [H]

Identifier: 118478562

GI number: 118478562

Start: 3124387

End: 3125415

Strand: Reverse

Name: hypE [H]

Synonym: BALH_2938

Alternate gene names: 118478562

Gene position: 3125415-3124387 (Counterclockwise)

Preceding gene: 118478563

Following gene: 118478561

Centisome position: 59.45

GC content: 33.62

Gene sequence:

>1029_bases
ATGAAATTAACTAAAGATTTAGAAAATATAATTTTAGATCATGGAACAGGAGGACTATTGAGTCATGATTTAATTAGTTC
AATTATTACTGCAAAACTAGAAGATGTTCACCTTGGAAAAATGGAGGATAGTGCCATTCTTGAGGTGAGTAGTAGAAGAT
TGGCGATGACAACAGACTCTTTTGTTATTGATCCTATCTTTTTTGGTGAAGGAAATATAGGTAAAGTAGCAGTTTGTGGA
ACGGTTAATGATTTAGCGGTTAGTGGTGCAAAACCACTTTATCTATCATTGGCATTAGTACTAGAAGAAGGTTTTCCAAT
TAAAGATTTGGAAGAAATATTAGATTCTATAAGAGAGACCGCGAAAGAAGCTGGCGTGTATATTGTTGCTGGGGATACAA
AAGTTGTTAAAAAAGGTGAAGTAGACAAAATTTTTATTAATACAACTGGAATAGGAGTTTTTGAAGGAGATGTATCACCA
TTTTCGGTAAATTCTATTCAAGAAGGTGACGATATCATTATAACAGGACAACTAGGAAACCATAGTATACATATCCTTTC
TATCAGAGAAGGATTAGGGTTTGAACAGAGAATAAATAGTGATTGTGCACCATTAAATCATATGATATCAGAGTTAAAAA
ATCATTTTGGTGATTCTATACATTGTATGCGAGATATTACAAGAGGCGGGTTAGGTACAGTTTTAAATGAAGTCTCAGAA
ACAATTAATACTGGAATAAAAATACAAGAAAGAGATATTCCTATGTTAGCAGAAACTATTATGGCTGCCGACATGTTAGG
TGTTAATCCAATGTATCTAGCTAATGAGGGCAATGTTTGTATGTTTGTGTCTCCAGAGGTAAGTGAGGAAGTCGTGAGGG
TATTAAAAAATACTAAATATGGTAAAGAAGCTGCGGTAATTGGTAAAGTTACTCAAACAAAAGAAAGACAAGTGCTCATG
GAAGCAAAATCAGGTGAATTGAAACTCATTGAGTTATTATATGGGGCAGAATTACCTCGATTATGTTAG

Upstream 100 bases:

>100_bases
GGAGTTGCAATTCCGTAAGTAAATACGTTGTAATATCACTTGTTCTATGTAGCAAGTGATATTATTTTTCAAAAATAAAA
ATAAAAAGGAGTTTTAACAA

Downstream 100 bases:

>100_bases
GAGACAATTTATGAAAAAAGTAATAAATATGTTTATAAAAAAGTATCAAGTTAAAGGCATTGTGCAAGGTGTTGGTTTTA
GACCTTTCGTATATAGAATA

Product: hydrogenase expression/formation protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKLTKDLENIILDHGTGGLLSHDLISSIITAKLEDVHLGKMEDSAILEVSSRRLAMTTDSFVIDPIFFGEGNIGKVAVCG
TVNDLAVSGAKPLYLSLALVLEEGFPIKDLEEILDSIRETAKEAGVYIVAGDTKVVKKGEVDKIFINTTGIGVFEGDVSP
FSVNSIQEGDDIIITGQLGNHSIHILSIREGLGFEQRINSDCAPLNHMISELKNHFGDSIHCMRDITRGGLGTVLNEVSE
TINTGIKIQERDIPMLAETIMAADMLGVNPMYLANEGNVCMFVSPEVSEEVVRVLKNTKYGKEAAVIGKVTQTKERQVLM
EAKSGELKLIELLYGAELPRLC

Sequences:

>Translated_342_residues
MKLTKDLENIILDHGTGGLLSHDLISSIITAKLEDVHLGKMEDSAILEVSSRRLAMTTDSFVIDPIFFGEGNIGKVAVCG
TVNDLAVSGAKPLYLSLALVLEEGFPIKDLEEILDSIRETAKEAGVYIVAGDTKVVKKGEVDKIFINTTGIGVFEGDVSP
FSVNSIQEGDDIIITGQLGNHSIHILSIREGLGFEQRINSDCAPLNHMISELKNHFGDSIHCMRDITRGGLGTVLNEVSE
TINTGIKIQERDIPMLAETIMAADMLGVNPMYLANEGNVCMFVSPEVSEEVVRVLKNTKYGKEAAVIGKVTQTKERQVLM
EAKSGELKLIELLYGAELPRLC
>Mature_342_residues
MKLTKDLENIILDHGTGGLLSHDLISSIITAKLEDVHLGKMEDSAILEVSSRRLAMTTDSFVIDPIFFGEGNIGKVAVCG
TVNDLAVSGAKPLYLSLALVLEEGFPIKDLEEILDSIRETAKEAGVYIVAGDTKVVKKGEVDKIFINTTGIGVFEGDVSP
FSVNSIQEGDDIIITGQLGNHSIHILSIREGLGFEQRINSDCAPLNHMISELKNHFGDSIHCMRDITRGGLGTVLNEVSE
TINTGIKIQERDIPMLAETIMAADMLGVNPMYLANEGNVCMFVSPEVSEEVVRVLKNTKYGKEAAVIGKVTQTKERQVLM
EAKSGELKLIELLYGAELPRLC

Specific function: May be involved in the maturation of the nifE hydrogenase [H]

COG id: COG0309

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hypE family [H]

Homologues:

Organism=Escherichia coli, GI226510967, Length=341, Percent_Identity=39.2961876832845, Blast_Score=253, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR011854
- InterPro:   IPR016188 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: NA

Molecular weight: Translated: 37140; Mature: 37140

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTKDLENIILDHGTGGLLSHDLISSIITAKLEDVHLGKMEDSAILEVSSRRLAMTTDS
CCCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCC
FVIDPIFFGEGNIGKVAVCGTVNDLAVSGAKPLYLSLALVLEEGFPIKDLEEILDSIRET
EEEEEEEECCCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AKEAGVYIVAGDTKVVKKGEVDKIFINTTGIGVFEGDVSPFSVNSIQEGDDIIITGQLGN
HHHCCEEEEECCCEEEECCCCCEEEEEECCCEEEECCCCCEECCCCCCCCCEEEEEECCC
HSIHILSIREGLGFEQRINSDCAPLNHMISELKNHFGDSIHCMRDITRGGLGTVLNEVSE
CEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH
TINTGIKIQERDIPMLAETIMAADMLGVNPMYLANEGNVCMFVSPEVSEEVVRVLKNTKY
HHHCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCHHHHHHHHHHCCCC
GKEAAVIGKVTQTKERQVLMEAKSGELKLIELLYGAELPRLC
CCHHHEEEHHHHHHHHHHHEECCCCCEEEEEEHHCCCCCCCC
>Mature Secondary Structure
MKLTKDLENIILDHGTGGLLSHDLISSIITAKLEDVHLGKMEDSAILEVSSRRLAMTTDS
CCCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEECCC
FVIDPIFFGEGNIGKVAVCGTVNDLAVSGAKPLYLSLALVLEEGFPIKDLEEILDSIRET
EEEEEEEECCCCCCCEEEECCCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AKEAGVYIVAGDTKVVKKGEVDKIFINTTGIGVFEGDVSPFSVNSIQEGDDIIITGQLGN
HHHCCEEEEECCCEEEECCCCCEEEEEECCCEEEECCCCCEECCCCCCCCCEEEEEECCC
HSIHILSIREGLGFEQRINSDCAPLNHMISELKNHFGDSIHCMRDITRGGLGTVLNEVSE
CEEEEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHH
TINTGIKIQERDIPMLAETIMAADMLGVNPMYLANEGNVCMFVSPEVSEEVVRVLKNTKY
HHHCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCEEEEECCCHHHHHHHHHHCCCC
GKEAAVIGKVTQTKERQVLMEAKSGELKLIELLYGAELPRLC
CCHHHEEEHHHHHHHHHHHEECCCCCEEEEEEHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1526470 [H]