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The map label for this gene is rapF [H]

Identifier: 118478551

GI number: 118478551

Start: 3105671

End: 3106801

Strand: Direct

Name: rapF [H]

Synonym: BALH_2927

Alternate gene names: 118478551

Gene position: 3105671-3106801 (Clockwise)

Preceding gene: 118478550

Following gene: 118478553

Centisome position: 59.08

GC content: 33.42

Gene sequence:

>1131_bases
ATGGGGGAATATATAGTGAGTGTTTCAGTAAAGGGCAATGAGCAATTAACCTCTCTATTGAACGACTGGTATCGATCTAT
GCTATCTCAACAAGTTGTAAAAGCTACTAATCTAAAAAAGAAAATTGATGAAAAAATTACTAAGTTAAGCATTGAGTCAA
ATCAAGAACGTCAGGATCAAAATTTGTTACTATATTACTCACTACTTGAATTTCGTTACACAGTCTTAACAGATAGCCTC
GGTATTCAACAAAATAGTTTTGATGCTATTAGTGATTACGATATGCCTACAGACCATTTTCTACGCTTCTATTATCACTT
TTTCAAATCCATTCATTCCACTTTTATATCAAGTTTTACTGAGGCAGAGGAACATTATAAACTGGCAGAAAAGATACTAG
TAAACATTCCAGATGAGATTGAACATGCTGAATTCTACTATAGAATTGCTACTTTTTATCATCATACCTATAACATGCTC
GCTGCTATCGAATACGCAAATAAATCGAGAGCAATCTTTTCGAAGTATGAAGGTTATGAAGTAAAAACAGCCTTTTGTAA
TAGTTTGTTAGGGGGTTGCTGTATCTATTTAAAGCAGTACGAACAAGCTGAAGAATATCTGCATTGTGCGATTGAATTAC
TGCAGAAGAATAGGGAAGAAGATTCCTTGTTATACGTAAAAAGTACTATGGGGTGGCTGTATTCTGATCAAAGTATGTCT
ACGTTAGCTATTCGTCACCTTTCAGAAGTAACAGAAAAAATCCCTACACACTTCAAAGCTATCTTCCTACAGGCTAAGGA
ACATTATAAATTAGGAGGACAATTAGCAGCTAGCAAACTCATTGATAAGGGATTACAGATCTGCAGAGGAATTCATAACG
AAGAATACACACACCACTTCTCTATTTTAAAAAGATTAAATGAAAATATTCCACTGGAAGAATTAGAAAAAATCATTCAA
GAAGGAATCTTATACTTTGAGCAAGAAGAATTATGGGAATATGTTGTCGAATACGCTGAATTATTTGCCACAAAATGTAG
ACAATTAGAGAACCATCAAAAGGTAAGTGATTATTTCCATATTTGTTACCAAGCAAGACGAAAATCAATTGAAAAAGGAG
TGTTAAAATAA

Upstream 100 bases:

>100_bases
TTTTATGAATTTTATTGAAAAACATTGTAAAATACCTCCATTTTTCCTTCTATTTTGCTATGATAGTTACAATTTAATAG
GACTATGATAATTCTATAGG

Downstream 100 bases:

>100_bases
TGAAAAAAATCAGCCTATTATTATCGGGTATTGCTTTTATTGGGGTTCTAACCTTGGGAATTTCTCAATTCTCTAAAGCG
GATCAGTTTGCTACTCATGG

Product: TPR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MGEYIVSVSVKGNEQLTSLLNDWYRSMLSQQVVKATNLKKKIDEKITKLSIESNQERQDQNLLLYYSLLEFRYTVLTDSL
GIQQNSFDAISDYDMPTDHFLRFYYHFFKSIHSTFISSFTEAEEHYKLAEKILVNIPDEIEHAEFYYRIATFYHHTYNML
AAIEYANKSRAIFSKYEGYEVKTAFCNSLLGGCCIYLKQYEQAEEYLHCAIELLQKNREEDSLLYVKSTMGWLYSDQSMS
TLAIRHLSEVTEKIPTHFKAIFLQAKEHYKLGGQLAASKLIDKGLQICRGIHNEEYTHHFSILKRLNENIPLEELEKIIQ
EGILYFEQEELWEYVVEYAELFATKCRQLENHQKVSDYFHICYQARRKSIEKGVLK

Sequences:

>Translated_376_residues
MGEYIVSVSVKGNEQLTSLLNDWYRSMLSQQVVKATNLKKKIDEKITKLSIESNQERQDQNLLLYYSLLEFRYTVLTDSL
GIQQNSFDAISDYDMPTDHFLRFYYHFFKSIHSTFISSFTEAEEHYKLAEKILVNIPDEIEHAEFYYRIATFYHHTYNML
AAIEYANKSRAIFSKYEGYEVKTAFCNSLLGGCCIYLKQYEQAEEYLHCAIELLQKNREEDSLLYVKSTMGWLYSDQSMS
TLAIRHLSEVTEKIPTHFKAIFLQAKEHYKLGGQLAASKLIDKGLQICRGIHNEEYTHHFSILKRLNENIPLEELEKIIQ
EGILYFEQEELWEYVVEYAELFATKCRQLENHQKVSDYFHICYQARRKSIEKGVLK
>Mature_375_residues
GEYIVSVSVKGNEQLTSLLNDWYRSMLSQQVVKATNLKKKIDEKITKLSIESNQERQDQNLLLYYSLLEFRYTVLTDSLG
IQQNSFDAISDYDMPTDHFLRFYYHFFKSIHSTFISSFTEAEEHYKLAEKILVNIPDEIEHAEFYYRIATFYHHTYNMLA
AIEYANKSRAIFSKYEGYEVKTAFCNSLLGGCCIYLKQYEQAEEYLHCAIELLQKNREEDSLLYVKSTMGWLYSDQSMST
LAIRHLSEVTEKIPTHFKAIFLQAKEHYKLGGQLAASKLIDKGLQICRGIHNEEYTHHFSILKRLNENIPLEELEKIIQE
GILYFEQEELWEYVVEYAELFATKCRQLENHQKVSDYFHICYQARRKSIEKGVLK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 44383; Mature: 44252

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEYIVSVSVKGNEQLTSLLNDWYRSMLSQQVVKATNLKKKIDEKITKLSIESNQERQDQ
CCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NLLLYYSLLEFRYTVLTDSLGIQQNSFDAISDYDMPTDHFLRFYYHFFKSIHSTFISSFT
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAEEHYKLAEKILVNIPDEIEHAEFYYRIATFYHHTYNMLAAIEYANKSRAIFSKYEGYE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
VKTAFCNSLLGGCCIYLKQYEQAEEYLHCAIELLQKNREEDSLLYVKSTMGWLYSDQSMS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCHH
TLAIRHLSEVTEKIPTHFKAIFLQAKEHYKLGGQLAASKLIDKGLQICRGIHNEEYTHHF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SILKRLNENIPLEELEKIIQEGILYFEQEELWEYVVEYAELFATKCRQLENHQKVSDYFH
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICYQARRKSIEKGVLK
HHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GEYIVSVSVKGNEQLTSLLNDWYRSMLSQQVVKATNLKKKIDEKITKLSIESNQERQDQ
CCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
NLLLYYSLLEFRYTVLTDSLGIQQNSFDAISDYDMPTDHFLRFYYHFFKSIHSTFISSFT
CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAEEHYKLAEKILVNIPDEIEHAEFYYRIATFYHHTYNMLAAIEYANKSRAIFSKYEGYE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
VKTAFCNSLLGGCCIYLKQYEQAEEYLHCAIELLQKNREEDSLLYVKSTMGWLYSDQSMS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCCCHH
TLAIRHLSEVTEKIPTHFKAIFLQAKEHYKLGGQLAASKLIDKGLQICRGIHNEEYTHHF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SILKRLNENIPLEELEKIIQEGILYFEQEELWEYVVEYAELFATKCRQLENHQKVSDYFH
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ICYQARRKSIEKGVLK
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]