| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is czcD [H]
Identifier: 118477237
GI number: 118477237
Start: 1687435
End: 1688334
Strand: Direct
Name: czcD [H]
Synonym: BALH_1543
Alternate gene names: 118477237
Gene position: 1687435-1688334 (Clockwise)
Preceding gene: 118477235
Following gene: 118477241
Centisome position: 32.1
GC content: 35.89
Gene sequence:
>900_bases ATGGGACATTCGCATGATCATGGGCATTCTAAAAATAAAAAAGCGTTGCTACTTGCATTCTTACTAACAACAAGTTTTAT GATTGCTGAAGTTATTGGGGGATTTGTAACAAATAGTTTAGCACTACTATCTGACGCGGGGCATATGTTAAGTGATGCGG TATCTTTAGCTTTAAGTTTACTTGCGTTTAAGCTAGGAGAAAAAACAGCAACAGCTGCGAAAACATACGGGTATAAGCGA GTCGAAATGTTAGCGGCATTATGTAACGGTGTCGTTCTTATTGTCATTTCAGTATACATTTTTATTGAAGCAATTCGCCG TTTTAAAGAACCAGTTGAGATTGCTAGTAATGGGATGCTCATTATTGCTGTACTTGGTCTGCTTATTAATGTTTTATCAG CTTGGATATTAATGAGAGGCGGAGATGTAAAGGGGAATTTGAATGTAAGAAGTGCTTTCCTACACGTATTAGGCGATTTA TTAGGATCCGTCGGAGCGATTATTGCTGCGTTACTTATTAAATTTTTCGGATGGACTGCTGCAGATGCGATTGCTAGTAT TCTTGTGTCTATTTTAGTCATTATTAGTGGATGGCGTGTAACACGTGATACAGTCCATATATTAATGGAAGGTGCACCAC AGCACATAAATGTTGAAGAGGTAAAAAGTACATTATTAAATATTACGGTTGTAAAAGAAGTTCATGATTTGCACATATGG TCTGTTACATCTGATTTTCAAGTATTAACTTGCCATTTGATTATTAACGGAAATGAAACACAAAATGTATTAAAAGAGGC TACGGATGTATTAAAGAAGAAGTTTCATGTAGAACATGTCACCATTCAAGTAGAAATAGATGGTGAATTTCATCATAGTG AGACAACTTGCAAAGTATGA
Upstream 100 bases:
>100_bases TTTGAAAAGTATCGAAGTGTGTATACAGAGGAAGCGGGATAAAGATAGGGAATTTGTTTCATACTAATGTACAGATATTG CACTTAAAGGAGCATTTTGT
Downstream 100 bases:
>100_bases AAGAAAAAGGATACGAAAAAGTGTCATAACATTTTTCGCGCGGCATACATATATATAATGTGGCCACAAATACTTTGTAA GGTAAATATTTCATGAAATT
Product: cobalt-zinc-cadmium resistance protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MGHSHDHGHSKNKKALLLAFLLTTSFMIAEVIGGFVTNSLALLSDAGHMLSDAVSLALSLLAFKLGEKTATAAKTYGYKR VEMLAALCNGVVLIVISVYIFIEAIRRFKEPVEIASNGMLIIAVLGLLINVLSAWILMRGGDVKGNLNVRSAFLHVLGDL LGSVGAIIAALLIKFFGWTAADAIASILVSILVIISGWRVTRDTVHILMEGAPQHINVEEVKSTLLNITVVKEVHDLHIW SVTSDFQVLTCHLIINGNETQNVLKEATDVLKKKFHVEHVTIQVEIDGEFHHSETTCKV
Sequences:
>Translated_299_residues MGHSHDHGHSKNKKALLLAFLLTTSFMIAEVIGGFVTNSLALLSDAGHMLSDAVSLALSLLAFKLGEKTATAAKTYGYKR VEMLAALCNGVVLIVISVYIFIEAIRRFKEPVEIASNGMLIIAVLGLLINVLSAWILMRGGDVKGNLNVRSAFLHVLGDL LGSVGAIIAALLIKFFGWTAADAIASILVSILVIISGWRVTRDTVHILMEGAPQHINVEEVKSTLLNITVVKEVHDLHIW SVTSDFQVLTCHLIINGNETQNVLKEATDVLKKKFHVEHVTIQVEIDGEFHHSETTCKV >Mature_298_residues GHSHDHGHSKNKKALLLAFLLTTSFMIAEVIGGFVTNSLALLSDAGHMLSDAVSLALSLLAFKLGEKTATAAKTYGYKRV EMLAALCNGVVLIVISVYIFIEAIRRFKEPVEIASNGMLIIAVLGLLINVLSAWILMRGGDVKGNLNVRSAFLHVLGDLL GSVGAIIAALLIKFFGWTAADAIASILVSILVIISGWRVTRDTVHILMEGAPQHINVEEVKSTLLNITVVKEVHDLHIWS VTSDFQVLTCHLIINGNETQNVLKEATDVLKKKFHVEHVTIQVEIDGEFHHSETTCKV
Specific function: Involved in divalent cation and potassium homeostasis in the cell. Catalyzes the active efflux of zinc, cadmium and cobalt, in exchange for potassium and H(+) ions [H]
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily [H]
Homologues:
Organism=Homo sapiens, GI21361112, Length=298, Percent_Identity=34.2281879194631, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI52352805, Length=305, Percent_Identity=32.4590163934426, Blast_Score=165, Evalue=4e-41, Organism=Homo sapiens, GI21359890, Length=305, Percent_Identity=35.0819672131148, Blast_Score=164, Evalue=8e-41, Organism=Homo sapiens, GI289803013, Length=303, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=6e-33, Organism=Homo sapiens, GI289803009, Length=303, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=6e-33, Organism=Homo sapiens, GI289803007, Length=303, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=6e-33, Organism=Homo sapiens, GI289803003, Length=303, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=6e-33, Organism=Homo sapiens, GI64762489, Length=303, Percent_Identity=33.3333333333333, Blast_Score=138, Evalue=6e-33, Organism=Homo sapiens, GI20070323, Length=325, Percent_Identity=27.6923076923077, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI14210520, Length=230, Percent_Identity=32.1739130434783, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI52351208, Length=132, Percent_Identity=39.3939393939394, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI52352803, Length=124, Percent_Identity=41.9354838709677, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI222080086, Length=127, Percent_Identity=29.9212598425197, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI40255009, Length=127, Percent_Identity=29.9212598425197, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1786966, Length=278, Percent_Identity=46.7625899280576, Blast_Score=204, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17555794, Length=318, Percent_Identity=36.4779874213836, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17555796, Length=314, Percent_Identity=35.6687898089172, Blast_Score=181, Evalue=3e-46, Organism=Caenorhabditis elegans, GI193210990, Length=326, Percent_Identity=33.7423312883436, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI32564488, Length=296, Percent_Identity=30.0675675675676, Blast_Score=130, Evalue=8e-31, Organism=Saccharomyces cerevisiae, GI6320411, Length=180, Percent_Identity=39.4444444444444, Blast_Score=105, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6323899, Length=132, Percent_Identity=40.1515151515151, Blast_Score=84, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6324892, Length=125, Percent_Identity=39.2, Blast_Score=77, Evalue=3e-15, Organism=Drosophila melanogaster, GI24583858, Length=338, Percent_Identity=31.6568047337278, Blast_Score=152, Evalue=3e-37, Organism=Drosophila melanogaster, GI24656728, Length=339, Percent_Identity=30.9734513274336, Blast_Score=117, Evalue=6e-27, Organism=Drosophila melanogaster, GI24656724, Length=339, Percent_Identity=30.9734513274336, Blast_Score=117, Evalue=6e-27, Organism=Drosophila melanogaster, GI24656720, Length=339, Percent_Identity=30.9734513274336, Blast_Score=117, Evalue=6e-27, Organism=Drosophila melanogaster, GI24656715, Length=339, Percent_Identity=30.9734513274336, Blast_Score=117, Evalue=6e-27, Organism=Drosophila melanogaster, GI21357035, Length=339, Percent_Identity=30.9734513274336, Blast_Score=117, Evalue=6e-27, Organism=Drosophila melanogaster, GI24585900, Length=150, Percent_Identity=37.3333333333333, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24585898, Length=150, Percent_Identity=37.3333333333333, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24585896, Length=150, Percent_Identity=37.3333333333333, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI19921672, Length=150, Percent_Identity=37.3333333333333, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24584409, Length=142, Percent_Identity=33.8028169014084, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI28574430, Length=142, Percent_Identity=33.8028169014084, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI24645863, Length=125, Percent_Identity=36.8, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 32530; Mature: 32399
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHSHDHGHSKNKKALLLAFLLTTSFMIAEVIGGFVTNSLALLSDAGHMLSDAVSLALSL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAFKLGEKTATAAKTYGYKRVEMLAALCNGVVLIVISVYIFIEAIRRFKEPVEIASNGML HHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH IIAVLGLLINVLSAWILMRGGDVKGNLNVRSAFLHVLGDLLGSVGAIIAALLIKFFGWTA HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH ADAIASILVSILVIISGWRVTRDTVHILMEGAPQHINVEEVKSTLLNITVVKEVHDLHIW HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE SVTSDFQVLTCHLIINGNETQNVLKEATDVLKKKFHVEHVTIQVEIDGEFHHSETTCKV EECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCEECCCCCCCC >Mature Secondary Structure GHSHDHGHSKNKKALLLAFLLTTSFMIAEVIGGFVTNSLALLSDAGHMLSDAVSLALSL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAFKLGEKTATAAKTYGYKRVEMLAALCNGVVLIVISVYIFIEAIRRFKEPVEIASNGML HHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH IIAVLGLLINVLSAWILMRGGDVKGNLNVRSAFLHVLGDLLGSVGAIIAALLIKFFGWTA HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH ADAIASILVSILVIISGWRVTRDTVHILMEGAPQHINVEEVKSTLLNITVVKEVHDLHIW HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEE SVTSDFQVLTCHLIINGNETQNVLKEATDVLKKKFHVEHVTIQVEIDGEFHHSETTCKV EECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA