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The map label for this gene is ycgR [H]

Identifier: 118477241

GI number: 118477241

Start: 1692182

End: 1692946

Strand: Direct

Name: ycgR [H]

Synonym: BALH_1548

Alternate gene names: 118477241

Gene position: 1692182-1692946 (Clockwise)

Preceding gene: 118477237

Following gene: 118477242

Centisome position: 32.19

GC content: 32.94

Gene sequence:

>765_bases
GTGTTTGTGACAGAAGATATGATTCAAAAAGTAATGCTGAGATCTCCAATTGTTGCAATGATTCCAGCAGTATTTGTAGG
AATTCTTTTTCCAATGTGTGAATGTGTCATTATACCAATTGTAAGAAGGCTCATTCAAAAGGGGTTACCACTTCATGTAG
GCATTGTTATTTTACTAAGTGCACCTATAATGAATCCGGTTGTTCTTTTATCTACCATATATGCGTTTCAAAAAAATGAT
TACGTTGTATATGCACGCTTTGGGATAACAATTTTTGTTGCTCTATTCATAGGCTTAATTGTGTATCATCGCTATCGCGA
AAGAAATGTTTTAAAAGACGTAGAGGGTTCAGTTCAAAAAAGCAAAAACAAGAGTTGGAAAGATGTTATGAATCACACTG
TAGATGAGTTTTTTGATACTGGTAAGTATTTATTGATGGGTGCTTTTTTAGCAAGTGTATTTCAAACTTTTTTTGATCGG
AATGTACTGGATACAGTAGCACATAACGAAGTAGTTGCCCCAATTATTATGATGGGATTTGGTTATGTTTTATCCATTTG
CTCATCTGCTGATGCATTTATAGCGGCATCTTTTGGACAAGTTTTCTCTGTAAAAGCACTTCTCGCATTTCTTGTGTTTG
GACCTATGCTTGATATGAAAAATACATTAATGCTATTTGCATATTTTCAAAAGAAATTTGTATTCTTTTTGATTGGAATT
ATTATTTTATCAGTGTACACAATCGTGCAAATTACAAGATTATAG

Upstream 100 bases:

>100_bases
GCCGCAAGTATGGTTGAATGTGAACACACTCTTTTTAAGTATTATTTTTGAAGCAATACCTTTTATTTTACTAGGGATAA
TCGTTTCTTCACTCATTCAA

Downstream 100 bases:

>100_bases
GAGGTGAGAAACAATGGAGAAAGAGGAGCAGAAGGCATATCATCGCTATATACGTGGCATTATTTTAATTGGTTTAGCAA
TGCTCTTATTTAAATTACTT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MFVTEDMIQKVMLRSPIVAMIPAVFVGILFPMCECVIIPIVRRLIQKGLPLHVGIVILLSAPIMNPVVLLSTIYAFQKND
YVVYARFGITIFVALFIGLIVYHRYRERNVLKDVEGSVQKSKNKSWKDVMNHTVDEFFDTGKYLLMGAFLASVFQTFFDR
NVLDTVAHNEVVAPIIMMGFGYVLSICSSADAFIAASFGQVFSVKALLAFLVFGPMLDMKNTLMLFAYFQKKFVFFLIGI
IILSVYTIVQITRL

Sequences:

>Translated_254_residues
MFVTEDMIQKVMLRSPIVAMIPAVFVGILFPMCECVIIPIVRRLIQKGLPLHVGIVILLSAPIMNPVVLLSTIYAFQKND
YVVYARFGITIFVALFIGLIVYHRYRERNVLKDVEGSVQKSKNKSWKDVMNHTVDEFFDTGKYLLMGAFLASVFQTFFDR
NVLDTVAHNEVVAPIIMMGFGYVLSICSSADAFIAASFGQVFSVKALLAFLVFGPMLDMKNTLMLFAYFQKKFVFFLIGI
IILSVYTIVQITRL
>Mature_254_residues
MFVTEDMIQKVMLRSPIVAMIPAVFVGILFPMCECVIIPIVRRLIQKGLPLHVGIVILLSAPIMNPVVLLSTIYAFQKND
YVVYARFGITIFVALFIGLIVYHRYRERNVLKDVEGSVQKSKNKSWKDVMNHTVDEFFDTGKYLLMGAFLASVFQTFFDR
NVLDTVAHNEVVAPIIMMGFGYVLSICSSADAFIAASFGQVFSVKALLAFLVFGPMLDMKNTLMLFAYFQKKFVFFLIGI
IILSVYTIVQITRL

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 28728; Mature: 28728

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]