| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is coiA [H]
Identifier: 118476771
GI number: 118476771
Start: 1206718
End: 1207962
Strand: Direct
Name: coiA [H]
Synonym: BALH_1054
Alternate gene names: 118476771
Gene position: 1206718-1207962 (Clockwise)
Preceding gene: 118476770
Following gene: 118476772
Centisome position: 22.95
GC content: 36.06
Gene sequence:
>1245_bases GTGATTCCGATATTTATCGCAAAAAGAGAAAATGGAGAAAAAATTCATCTACTCGATCATCATGATGAAGAGCTTTTACA CCATATGCGTAAAAGGGAAAGTTTCTTTTGCATAGCTTGCGGGAAGGAAGTACTAATGAGATTAGGAAAACAAAAAAGGT GGCATTTTGCTCATAAGAAAGTAGATTCATGTTTAGCCTTTTATGAAGCAGAATCTACATATCATATGTACGGTAAAGAA TTGTTATATCGGTGGTTCAAACGTCAAAATGTTCATGTAGAGATAGAGCATTATCTGCCAGAGATTCAGCAACGACCGGA TATTTTTATAGAGAGAGCAGGGAGAAAAATTGCGATTGAATATCAATGCGCCAATCTTTCTATAGAGCAGCTCTGCACAC GAACCTATTCGTATTGGCAAGCTGGTATACAGGTCATTTGGATTATTGGTGGAAATCAATTGAAAAAGCACTCTGCATAC TGGATGAAATTCTCCTCAATTATGGCTTTCTCCTTACAATCTTATCCTCAGCCACTTCTTATTTTCTTCTGTTCGAAACA AAAATCATTTATGAAATGCACGTTTATCACTTCATTTTCTACAAGCATTGCTTTCTCACATATTATATATTTACCAATTG AAACGACTACTTTTGAAATGCTCTTTTCTCCTGTTCCTTTCCAAAGGGAAGTATTAAACCGAGAATGGAAGAGGCGAAAG GACTATTTTCGTCAAAACGCTTTGCCCATTTGGAATTATAATCATAAGTCACTATTACGCCTCTTATACCAATGTAAATG TAACCCAGCAAATTTTCCTTCTGAAATTGGTGTGCCACTCCCGTCCTCATTTGCTTTTCAAACAAATTTATTTATATGGC AAGCTTTTCTATATATGAAGTGTATAGGTGAGCTTGCGGTAGGGGATTGTATTTCCCTCAAGTACGTGTGTAGTTATATA AAAAAGTATACGAAAAGGCGTATGCTCCCGTACTTTTCACAGCATATATGGAAAGTGGCAGTTACTGAATATATGACATT TTTATGTTATGCAGGTGTGTTGTATAAGGTAGGGATGTATACGTACCGAAAAATAAGGGATGCTGTTCCGTTAAAAACAG GGGGAGAAATTATGAAGCATGATGAAATATGTTTAGCGCATGCGCTATCTTTATTTGAGGCAAAATTTAACATGAGAGGA GGAAAAGGGGATATAATAAAGACTGATCGTGAAGGAATTACATAA
Upstream 100 bases:
>100_bases ATTATCACCTTTATTATAAAGAGAGATGTCCGAAATTGGGACATCTCTTTTTTAAAAAGGAATTTGTAATAAATTGTAGA ATATAAGGAGCTGAAAGGGT
Downstream 100 bases:
>100_bases GAGAAATCGAATTGTATGTAAGTAGAGATATTTAAAGGAGGGCTTAAAGGATGTCTGAACAAAATACAGCAAAAACATTA CCAGATCGTAACGAGATTGA
Product: competence protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MIPIFIAKRENGEKIHLLDHHDEELLHHMRKRESFFCIACGKEVLMRLGKQKRWHFAHKKVDSCLAFYEAESTYHMYGKE LLYRWFKRQNVHVEIEHYLPEIQQRPDIFIERAGRKIAIEYQCANLSIEQLCTRTYSYWQAGIQVIWIIGGNQLKKHSAY WMKFSSIMAFSLQSYPQPLLIFFCSKQKSFMKCTFITSFSTSIAFSHIIYLPIETTTFEMLFSPVPFQREVLNREWKRRK DYFRQNALPIWNYNHKSLLRLLYQCKCNPANFPSEIGVPLPSSFAFQTNLFIWQAFLYMKCIGELAVGDCISLKYVCSYI KKYTKRRMLPYFSQHIWKVAVTEYMTFLCYAGVLYKVGMYTYRKIRDAVPLKTGGEIMKHDEICLAHALSLFEAKFNMRG GKGDIIKTDREGIT
Sequences:
>Translated_414_residues MIPIFIAKRENGEKIHLLDHHDEELLHHMRKRESFFCIACGKEVLMRLGKQKRWHFAHKKVDSCLAFYEAESTYHMYGKE LLYRWFKRQNVHVEIEHYLPEIQQRPDIFIERAGRKIAIEYQCANLSIEQLCTRTYSYWQAGIQVIWIIGGNQLKKHSAY WMKFSSIMAFSLQSYPQPLLIFFCSKQKSFMKCTFITSFSTSIAFSHIIYLPIETTTFEMLFSPVPFQREVLNREWKRRK DYFRQNALPIWNYNHKSLLRLLYQCKCNPANFPSEIGVPLPSSFAFQTNLFIWQAFLYMKCIGELAVGDCISLKYVCSYI KKYTKRRMLPYFSQHIWKVAVTEYMTFLCYAGVLYKVGMYTYRKIRDAVPLKTGGEIMKHDEICLAHALSLFEAKFNMRG GKGDIIKTDREGIT >Mature_414_residues MIPIFIAKRENGEKIHLLDHHDEELLHHMRKRESFFCIACGKEVLMRLGKQKRWHFAHKKVDSCLAFYEAESTYHMYGKE LLYRWFKRQNVHVEIEHYLPEIQQRPDIFIERAGRKIAIEYQCANLSIEQLCTRTYSYWQAGIQVIWIIGGNQLKKHSAY WMKFSSIMAFSLQSYPQPLLIFFCSKQKSFMKCTFITSFSTSIAFSHIIYLPIETTTFEMLFSPVPFQREVLNREWKRRK DYFRQNALPIWNYNHKSLLRLLYQCKCNPANFPSEIGVPLPSSFAFQTNLFIWQAFLYMKCIGELAVGDCISLKYVCSYI KKYTKRRMLPYFSQHIWKVAVTEYMTFLCYAGVLYKVGMYTYRKIRDAVPLKTGGEIMKHDEICLAHALSLFEAKFNMRG GKGDIIKTDREGIT
Specific function: Required for optimal transformation [H]
COG id: COG4469
COG function: function code R; Competence protein
Gene ontology:
Cell location: Cytoplasm (Probable). Note=Localizes at the cell poles of most competence-expressing cells [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010330 - InterPro: IPR021176 [H]
Pfam domain/function: PF06054 CoiA [H]
EC number: NA
Molecular weight: Translated: 49046; Mature: 49046
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPIFIAKRENGEKIHLLDHHDEELLHHMRKRESFFCIACGKEVLMRLGKQKRWHFAHKK CCEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCEEEEECCHHHHHHHCCCHHHHHHHHH VDSCLAFYEAESTYHMYGKELLYRWFKRQNVHVEIEHYLPEIQQRPDIFIERAGRKIAIE HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHCCCCCEEEEE YQCANLSIEQLCTRTYSYWQAGIQVIWIIGGNQLKKHSAYWMKFSSIMAFSLQSYPQPLL EEECCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE IFFCSKQKSFMKCTFITSFSTSIAFSHIIYLPIETTTFEMLFSPVPFQREVLNREWKRRK EEEECCCCCEEEEEEEEHHHHHHHEEEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHH DYFRQNALPIWNYNHKSLLRLLYQCKCNPANFPSEIGVPLPSSFAFQTNLFIWQAFLYMK HHHHHCCCCEECCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHH CIGELAVGDCISLKYVCSYIKKYTKRRMLPYFSQHIWKVAVTEYMTFLCYAGVLYKVGMY HHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYRKIRDAVPLKTGGEIMKHDEICLAHALSLFEAKFNMRGGKGDIIKTDREGIT HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC >Mature Secondary Structure MIPIFIAKRENGEKIHLLDHHDEELLHHMRKRESFFCIACGKEVLMRLGKQKRWHFAHKK CCEEEEEECCCCCEEEEECCCHHHHHHHHHHCCCEEEEECCHHHHHHHCCCHHHHHHHHH VDSCLAFYEAESTYHMYGKELLYRWFKRQNVHVEIEHYLPEIQQRPDIFIERAGRKIAIE HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCHHHCCCCCEEEEE YQCANLSIEQLCTRTYSYWQAGIQVIWIIGGNQLKKHSAYWMKFSSIMAFSLQSYPQPLL EEECCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE IFFCSKQKSFMKCTFITSFSTSIAFSHIIYLPIETTTFEMLFSPVPFQREVLNREWKRRK EEEECCCCCEEEEEEEEHHHHHHHEEEEEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHH DYFRQNALPIWNYNHKSLLRLLYQCKCNPANFPSEIGVPLPSSFAFQTNLFIWQAFLYMK HHHHHCCCCEECCCHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHH CIGELAVGDCISLKYVCSYIKKYTKRRMLPYFSQHIWKVAVTEYMTFLCYAGVLYKVGMY HHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TYRKIRDAVPLKTGGEIMKHDEICLAHALSLFEAKFNMRGGKGDIIKTDREGIT HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]