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The map label for this gene is yfhF [H]

Identifier: 118476202

GI number: 118476202

Start: 512761

End: 513705

Strand: Reverse

Name: yfhF [H]

Synonym: BALH_0451

Alternate gene names: 118476202

Gene position: 513705-512761 (Counterclockwise)

Preceding gene: 118476206

Following gene: 118476201

Centisome position: 9.77

GC content: 37.14

Gene sequence:

>945_bases
TTGCTTTTCAAGAATATATATAATGAGGAGGAAATACTTGTGAAAATCGCAATTTCTGGTGGTACCGGCTTTATCGGTAC
ATACCTTTCTACTTTTTTTATTCAAAAAGGATATACGGTTTACATTCTCACAAGAAAAAAAACTACTGAAACTTCTCACC
CTAACCTTCAGTATGTGCAATGGACACCAGATTTACAAACCTTCCCTCTCTCTTCTATTGATGTAGTTATTAATCTAGCT
GGAGAGTCTATTAATAGTAGATGGACAAAGAAACAAAAGAAAGTCATTTTAAACAGTAGAATCCTAACAACAAAAGGACT
CATTAAACAATTGCAGGCACTCCCTGCAAAACCACACACATTTATTAACGCAAGTGCAATTGGATACTATGGAACGTCTG
AAACCGAGTCTTTTACAGAACAGCATGAGACTCCTGGGGATGACTTTTTAGCAAATACAGTATGTTCATGGGAACAAGAA
GCATCTAAAGCTCGTTCTCTCGGAATTCGAACAGTATACGCAAGATTTGGAGTCGTATTAAGTGCAGATGGAGGAGCTCT
TCCAAAAATGCTACTCCCCTATCAATTCTATATCGGCGGTACAATTGGATCTGGAAACCAATGGTTATCATGGATTCATA
TAGATGATGTCGTTCGCCTGATTGATTTCATCATACACAAAAAAGAAATTGATGGCCCGCTCAACATTACAGCTCCGGAG
CCTATAAGAATGAAGGAATTTGGAGAAACCATTGCAACTATAATGAAAAAACCTCATTGGTTACCTGTCCCTTCATTTAT
ACTCCATGCTTTATTAGGTGAGATGAGCATACTTGTACTAGAAGGACAACATGTATTACCTAGTAAAGCAATTGAGCATG
GGTATCAATACACATTTCCAACAATAGACCATGCATTACAAAATATACTTTCGCATACAATGTAG

Upstream 100 bases:

>100_bases
AAATATTAAACCGTTCTTTCGATCGTTTTTGTACTTCTATTTTTGTAATGACAGCCATACTCTCACCTCTCTATTATTTT
AACATAGTCGAGGAACGTTT

Downstream 100 bases:

>100_bases
TACTTCTAAAACATAGTTTTACAGGGATTCCTTCCAAAATTTTCATTTTCTAGAATCCGGAGCATTATTACACAAATAAT
CGTTCAGTTACTTTTCCTTA

Product: NAD-dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MLFKNIYNEEEILVKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKTTETSHPNLQYVQWTPDLQTFPLSSIDVVINLA
GESINSRWTKKQKKVILNSRILTTKGLIKQLQALPAKPHTFINASAIGYYGTSETESFTEQHETPGDDFLANTVCSWEQE
ASKARSLGIRTVYARFGVVLSADGGALPKMLLPYQFYIGGTIGSGNQWLSWIHIDDVVRLIDFIIHKKEIDGPLNITAPE
PIRMKEFGETIATIMKKPHWLPVPSFILHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTIDHALQNILSHTM

Sequences:

>Translated_314_residues
MLFKNIYNEEEILVKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKTTETSHPNLQYVQWTPDLQTFPLSSIDVVINLA
GESINSRWTKKQKKVILNSRILTTKGLIKQLQALPAKPHTFINASAIGYYGTSETESFTEQHETPGDDFLANTVCSWEQE
ASKARSLGIRTVYARFGVVLSADGGALPKMLLPYQFYIGGTIGSGNQWLSWIHIDDVVRLIDFIIHKKEIDGPLNITAPE
PIRMKEFGETIATIMKKPHWLPVPSFILHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTIDHALQNILSHTM
>Mature_314_residues
MLFKNIYNEEEILVKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKTTETSHPNLQYVQWTPDLQTFPLSSIDVVINLA
GESINSRWTKKQKKVILNSRILTTKGLIKQLQALPAKPHTFINASAIGYYGTSETESFTEQHETPGDDFLANTVCSWEQE
ASKARSLGIRTVYARFGVVLSADGGALPKMLLPYQFYIGGTIGSGNQWLSWIHIDDVVRLIDFIIHKKEIDGPLNITAPE
PIRMKEFGETIATIMKKPHWLPVPSFILHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTIDHALQNILSHTM

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=304, Percent_Identity=34.5394736842105, Blast_Score=189, Evalue=2e-48,
Organism=Escherichia coli, GI1788642, Length=298, Percent_Identity=36.5771812080537, Blast_Score=199, Evalue=1e-52,
Organism=Drosophila melanogaster, GI28573846, Length=296, Percent_Identity=31.4189189189189, Blast_Score=175, Evalue=3e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 35252; Mature: 35252

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFKNIYNEEEILVKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKTTETSHPNLQYVQ
CCCCHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEE
WTPDLQTFPLSSIDVVINLAGESINSRWTKKQKKVILNSRILTTKGLIKQLQALPAKPHT
ECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHCCCCCCE
FINASAIGYYGTSETESFTEQHETPGDDFLANTVCSWEQEASKARSLGIRTVYARFGVVL
EEECCEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHCEEE
SADGGALPKMLLPYQFYIGGTIGSGNQWLSWIHIDDVVRLIDFIIHKKEIDGPLNITAPE
ECCCCCCCHHHCCEEEEECCEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEECCCC
PIRMKEFGETIATIMKKPHWLPVPSFILHALLGEMSILVLEGQHVLPSKAIEHGYQYTFP
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCEEECC
TIDHALQNILSHTM
HHHHHHHHHHHHCC
>Mature Secondary Structure
MLFKNIYNEEEILVKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKTTETSHPNLQYVQ
CCCCHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEE
WTPDLQTFPLSSIDVVINLAGESINSRWTKKQKKVILNSRILTTKGLIKQLQALPAKPHT
ECCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCEEHHHHHHHHHHHHCCCCCCE
FINASAIGYYGTSETESFTEQHETPGDDFLANTVCSWEQEASKARSLGIRTVYARFGVVL
EEECCEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHCEEE
SADGGALPKMLLPYQFYIGGTIGSGNQWLSWIHIDDVVRLIDFIIHKKEIDGPLNITAPE
ECCCCCCCHHHCCEEEEECCEECCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCEEECCCC
PIRMKEFGETIATIMKKPHWLPVPSFILHALLGEMSILVLEGQHVLPSKAIEHGYQYTFP
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCEEECC
TIDHALQNILSHTM
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]