| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yfhP [H]
Identifier: 118476206
GI number: 118476206
Start: 515713
End: 516693
Strand: Reverse
Name: yfhP [H]
Synonym: BALH_0455
Alternate gene names: 118476206
Gene position: 516693-515713 (Counterclockwise)
Preceding gene: 118476208
Following gene: 118476202
Centisome position: 9.83
GC content: 37.61
Gene sequence:
>981_bases ATGGACACAGCCACTCACCTTGTTATGGGCGTTACTCTAGGCAGCTTGGCCACGTTAGACCCAGCCATAGCACAAAGTGA TATTGGGCCACAAGCAGTTATGCTCGCTACAATTGCTGGTTCCAATATTCCTGATATCGATACAGTTTTAAAATTGCGTA ATAACGCTAAATATATTAGAAATCATCGCGGGATTACTCATTCCATTCCTGCCGTGATTCTTTGGTCATTCCTTATAAGT GGCATCTCTTTCGCCTTCTTTTCAGACGCTCCATATTTGCATCTACTACTTTGGTCATTTATTGCCGTCTTTCTTCATGT CTTTGTAGATATTTTCAATGCCTACGGTACACAGGCATTACGACCCTTCACAAAAAAATGGGTAGCGCTCGGTATCATTA ATACATTCGATACCGTCATTTTCTTCATCCATATACTCGCAATTGCTTGTATGCTCGTAGGTTCCCATAAAGGGTATACT GCCTTAGCAGCGTATATATTGATGATCGTTTACTATATCGGACGGATTATGATGCATAGAAATATAAGAAGCGTTGTACA AAAACGTTTCAAAAATGTTGAGAAGATAATTATTTCTCCTTCTTATCGATTTTATCATTATCATTTAGCAATTGTTACAA CCAATTATTACTACGTTGCTAGATGGCATCGCGGTAACATCATGGTATATGATAAATTCGACCGGGTACCGTTCCCAGAC AATACTATTATGCGCGCTGCTAAACAAGATGAAAACATCTCAGCATTTTTATCTTTCTCCCCTGTGTATCGATGGGACAT TTTCGATTATGATCATTATTACGAAGTTCGATTCATTGATTTGCGCTATCGTAGTAAAGATTATTATCCATTCGTTGCAA TCGTTCAACTCGATCATAATTTAAATATTATTAGTTCCTATACAGGATGGATCTTTAGTGAAGAAAAACTTCGAAAAAAA CTGGAGTTACTTCCACATTAA
Upstream 100 bases:
>100_bases AGGAAAAAATTTAAGTAAGATGACATAGGAAATAGAAGGCAAAGGACTTGAGGTATCGAATAAAAAGAGTTACATTAATA AAAAACGGAGGTGGATTTCT
Downstream 100 bases:
>100_bases AAAAAGCGACTTAAGTCGCTTTTTTTAATGTTTCAAATGATCTTCTTGATTGATTAAATGACTATATTTCGGATTATTTG TACGCATTTCATGAAGGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MDTATHLVMGVTLGSLATLDPAIAQSDIGPQAVMLATIAGSNIPDIDTVLKLRNNAKYIRNHRGITHSIPAVILWSFLIS GISFAFFSDAPYLHLLLWSFIAVFLHVFVDIFNAYGTQALRPFTKKWVALGIINTFDTVIFFIHILAIACMLVGSHKGYT ALAAYILMIVYYIGRIMMHRNIRSVVQKRFKNVEKIIISPSYRFYHYHLAIVTTNYYYVARWHRGNIMVYDKFDRVPFPD NTIMRAAKQDENISAFLSFSPVYRWDIFDYDHYYEVRFIDLRYRSKDYYPFVAIVQLDHNLNIISSYTGWIFSEEKLRKK LELLPH
Sequences:
>Translated_326_residues MDTATHLVMGVTLGSLATLDPAIAQSDIGPQAVMLATIAGSNIPDIDTVLKLRNNAKYIRNHRGITHSIPAVILWSFLIS GISFAFFSDAPYLHLLLWSFIAVFLHVFVDIFNAYGTQALRPFTKKWVALGIINTFDTVIFFIHILAIACMLVGSHKGYT ALAAYILMIVYYIGRIMMHRNIRSVVQKRFKNVEKIIISPSYRFYHYHLAIVTTNYYYVARWHRGNIMVYDKFDRVPFPD NTIMRAAKQDENISAFLSFSPVYRWDIFDYDHYYEVRFIDLRYRSKDYYPFVAIVQLDHNLNIISSYTGWIFSEEKLRKK LELLPH >Mature_326_residues MDTATHLVMGVTLGSLATLDPAIAQSDIGPQAVMLATIAGSNIPDIDTVLKLRNNAKYIRNHRGITHSIPAVILWSFLIS GISFAFFSDAPYLHLLLWSFIAVFLHVFVDIFNAYGTQALRPFTKKWVALGIINTFDTVIFFIHILAIACMLVGSHKGYT ALAAYILMIVYYIGRIMMHRNIRSVVQKRFKNVEKIIISPSYRFYHYHLAIVTTNYYYVARWHRGNIMVYDKFDRVPFPD NTIMRAAKQDENISAFLSFSPVYRWDIFDYDHYYEVRFIDLRYRSKDYYPFVAIVQLDHNLNIISSYTGWIFSEEKLRKK LELLPH
Specific function: May act as a negative regulator for the transcription of yfhQ, fabL, sspE and yfhP [H]
COG id: COG1988
COG function: function code R; Predicted membrane-bound metal-dependent hydrolases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007404 [H]
Pfam domain/function: PF04307 DUF457 [H]
EC number: NA
Molecular weight: Translated: 37849; Mature: 37849
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTATHLVMGVTLGSLATLDPAIAQSDIGPQAVMLATIAGSNIPDIDTVLKLRNNAKYIR CCCHHHHHHHHHHHHHHHCCHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHHCCHHHHH NHRGITHSIPAVILWSFLISGISFAFFSDAPYLHLLLWSFIAVFLHVFVDIFNAYGTQAL HCCCCCHHHHHHHHHHHHHHHHHEEHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHH RPFTKKWVALGIINTFDTVIFFIHILAIACMLVGSHKGYTALAAYILMIVYYIGRIMMHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH NIRSVVQKRFKNVEKIIISPSYRFYHYHLAIVTTNYYYVARWHRGNIMVYDKFDRVPFPD HHHHHHHHHHCCHHEEEECCCEEEEEEEEEEEEECEEEEEEEECCCEEEEECCCCCCCCC NTIMRAAKQDENISAFLSFSPVYRWDIFDYDHYYEVRFIDLRYRSKDYYPFVAIVQLDHN HHHHHHHCCCCCEEEEEEECCEEEEEEECCCCEEEEEEEEEEECCCCCCCEEEEEEECCC LNIISSYTGWIFSEEKLRKKLELLPH CEEEECCCCCEECHHHHHHHHHCCCC >Mature Secondary Structure MDTATHLVMGVTLGSLATLDPAIAQSDIGPQAVMLATIAGSNIPDIDTVLKLRNNAKYIR CCCHHHHHHHHHHHHHHHCCHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHHCCHHHHH NHRGITHSIPAVILWSFLISGISFAFFSDAPYLHLLLWSFIAVFLHVFVDIFNAYGTQAL HCCCCCHHHHHHHHHHHHHHHHHEEHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHH RPFTKKWVALGIINTFDTVIFFIHILAIACMLVGSHKGYTALAAYILMIVYYIGRIMMHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH NIRSVVQKRFKNVEKIIISPSYRFYHYHLAIVTTNYYYVARWHRGNIMVYDKFDRVPFPD HHHHHHHHHHCCHHEEEECCCEEEEEEEEEEEEECEEEEEEEECCCEEEEECCCCCCCCC NTIMRAAKQDENISAFLSFSPVYRWDIFDYDHYYEVRFIDLRYRSKDYYPFVAIVQLDHN HHHHHHHCCCCCEEEEEEECCEEEEEEECCCCEEEEEEEEEEECCCCCCCEEEEEEECCC LNIISSYTGWIFSEEKLRKKLELLPH CEEEECCCCCEECHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]