| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is yejL [C]
Identifier: 161367437
GI number: 161367437
Start: 2910098
End: 2910316
Strand: Direct
Name: yejL [C]
Synonym: Shewana3_2427
Alternate gene names: 161367437
Gene position: 2910098-2910316 (Clockwise)
Preceding gene: 117920868
Following gene: 117920871
Centisome position: 58.53
GC content: 47.49
Gene sequence:
>219_bases ATGGCAATCCAATCGAAATACTCAAACGCACAAGTTGAATCATTAATCGCCGAGATTTTAGCGGTACTCGAAAAGCACAA AGCCCCTACTGACTTAAGCCTCATGGCGCTGGGCAACTGTGTCACTCACCTGCTTGAGCGCAAAGTGCCAAGCGAATCTC GCCAAGCGGTCGCTGAACAATTTGCAAAAGCACTCGCACAATCGGTGAAATCCAATTAA
Upstream 100 bases:
>100_bases GCTTGTTCGATGTTAATACTCATAAGCCCTGATAGTGATGCTGGAATAAATCCGCTATTATATGCCGCTAATCCATTCCA AAGTGAAACATTTTTTGATT
Downstream 100 bases:
>100_bases GTTAGTCGAGTAACAATCGTTAAAACAACATAAGATACAACGTCTTTTAGGAATAAGCGGATCACTATGGTCGAGCGAAA AAAGCAAATGAGCCGCGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MAIQSKYSNAQVESLIAEILAVLEKHKAPTDLSLMALGNCVTHLLERKVPSESRQAVAEQFAKALAQSVKSN
Sequences:
>Translated_72_residues MAIQSKYSNAQVESLIAEILAVLEKHKAPTDLSLMALGNCVTHLLERKVPSESRQAVAEQFAKALAQSVKSN >Mature_71_residues AIQSKYSNAQVESLIAEILAVLEKHKAPTDLSLMALGNCVTHLLERKVPSESRQAVAEQFAKALAQSVKSN
Specific function: Unknown
COG id: COG3082
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0352 family [H]
Homologues:
Organism=Escherichia coli, GI1788514, Length=68, Percent_Identity=57.3529411764706, Blast_Score=82, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009857 - InterPro: IPR023202 - ProDom: PD027794 [H]
Pfam domain/function: PF07208 DUF1414 [H]
EC number: NA
Molecular weight: Translated: 7807; Mature: 7676
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQSKYSNAQVESLIAEILAVLEKHKAPTDLSLMALGNCVTHLLERKVPSESRQAVAEQ CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FAKALAQSVKSN HHHHHHHHHCCC >Mature Secondary Structure AIQSKYSNAQVESLIAEILAVLEKHKAPTDLSLMALGNCVTHLLERKVPSESRQAVAEQ CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FAKALAQSVKSN HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]