| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is yejM [H]
Identifier: 117920871
GI number: 117920871
Start: 2910383
End: 2912173
Strand: Direct
Name: yejM [H]
Synonym: Shewana3_2428
Alternate gene names: 117920871
Gene position: 2910383-2912173 (Clockwise)
Preceding gene: 161367437
Following gene: 117920873
Centisome position: 58.53
GC content: 49.58
Gene sequence:
>1791_bases ATGGTCGAGCGAAAAAAGCAAATGAGCCGCGATCGCGTGTCACGACTCATCAACTGGGGACATTGGTTCGCCTTCTTTAA TGGCCTGTTGGCCATGATTGTCGGCACACGCTATCTGAGCAGTGTGGGTTATCCCGAAACCTGGTTTGGCTGGGGCTACC TCGCCGTCAGCACCATTGGCCAGTTCAGTTTTCTTGCTTTTATCGCCTACTTGATCTGCCTATTCCCGCTGACCTTAATC TTGCCTTATTCCAAGATTTTAAGGGGCTTAGCGGCAGTTATCGCCACCTTAAGCCTGTGTATCTTACTGTACGACACCAT AGTGTATGCCGATTATGGCATGCACTTGAGCCCCTTCGCCTTCGACTTAGCCTGGGCCGATTTAAATGCCCTGCTCCACG GTACCTCTTATATTGTCACGCCTATCGCCATTTTGGTGATTGAGCTAACGGCGGCCAACTTCCTGTGGAAACGGATTGAG AAAATCCAAAAGCTAAATCTTGGCAATAAGGTCATTACCCTGATTGGGGTGTGTTTTGTCAGCAGCCATTTGATCCACAT TTGGGCCGACGCGGCCGATATCACCGAAATAACCCGTTTCGATGATACTTATCCGCTGTCATACCCCGCCACGGCGCGCT CCTTTATGGAAAGCCATGGTATTGATGGCTCTTCACAATCGGATGATGAAGCCAATCATGCGACCAGCACGCTCAGTTAC CCCACGCAGCCACTACAGTGTCAAGCCGACAGCAAACCCAATGTGTTAATGCTGACCATCGACAGCTTACGTGCCGACAT GGTGGACGCTAAGACCATGCCGTTTTTGCATCAATACACTGAGCAGAATCAGAGCTTTACCCAGCATTACAGTGGCGGCA ATCAATTTAGAACCGGCATGTTTTCCCTTCTCTATGGCTTGCAAGGCAGCTATGGCGATGCGCGCATCTTCAATAGCACT AGCCCCATCATGACCCAAAGCTTTAGACAGGCGGGTTATCAGCTTGGCTTATTTATCCCAGAAACCAATCTGAATTTACG CTCCGCGCAGGCCATGTTTAATGACTTTACCCCAGTCATCGCCAAAGAAACCAATGGCAGTGCCGATGCGGATTTACGCA GTGTAGGCCACTTTAAGCAATGGCAAAGCGAGCAACAGAGCCCATGGTTCGCCCTCGTCAACCTGAAGGCACCAGAGAAT TTTGATACCCCAGTCGGCTTCCTTGGCATCGAAACCGTTAAGGCCGATGCCAATTTGAAACCCGCACAAAAGGTGCTGTT TAACCAATATCGCCAATCGTTGAATTTTATTGATAAACAAATCCAAGCGATAGTGAGTGAGTTGCCGAGCGATACCTTAG TGGTGATCACTGGCGTTAACGGCAAGATATTCACCAGCAACAGCGATGAAGCCCAGCGCAATTTGTCTCCCGAGAGTGTC AGAGTGCCTATGGTTATTCATTGGCCGAATGTCGGCGCCAGTAAGGTTAAATACCGCACCAGTCACTATGGCGTAGTGCC AACCTTGATGACCCATATCTTAGGTTGCACCAATAACACCACTGACTACAGCGCGGGCCGTAGCCTACTGCAACCGAGCC AAGAGACCTGGATTTACATCGGTGACAGTCGCATATTTGCCATTTACCAACAGTCGGAAATCACCGTCATCGACCGCCAT GGTAAATACCGCATTTACGATGAAAACTTTGAGCACAGACTGCATAAGAAGATGAGTGCGCCCGAGCTTATCCAAGTGAT GCGAGAAGGCCGTCGCCTCTATAATCATTAA
Upstream 100 bases:
>100_bases AAAAGCACTCGCACAATCGGTGAAATCCAATTAAGTTAGTCGAGTAACAATCGTTAAAACAACATAAGATACAACGTCTT TTAGGAATAAGCGGATCACT
Downstream 100 bases:
>100_bases GTAGAGAGTTACTAGGCGAGCCAATCGTTACAGGTCGTTATTGCTCCCAGTAAAGCTTGGATTAAAACGAGAAAAAAATA AACAATAAACAAAAAGCCCC
Product: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 596; Mature: 596
Protein sequence:
>596_residues MVERKKQMSRDRVSRLINWGHWFAFFNGLLAMIVGTRYLSSVGYPETWFGWGYLAVSTIGQFSFLAFIAYLICLFPLTLI LPYSKILRGLAAVIATLSLCILLYDTIVYADYGMHLSPFAFDLAWADLNALLHGTSYIVTPIAILVIELTAANFLWKRIE KIQKLNLGNKVITLIGVCFVSSHLIHIWADAADITEITRFDDTYPLSYPATARSFMESHGIDGSSQSDDEANHATSTLSY PTQPLQCQADSKPNVLMLTIDSLRADMVDAKTMPFLHQYTEQNQSFTQHYSGGNQFRTGMFSLLYGLQGSYGDARIFNST SPIMTQSFRQAGYQLGLFIPETNLNLRSAQAMFNDFTPVIAKETNGSADADLRSVGHFKQWQSEQQSPWFALVNLKAPEN FDTPVGFLGIETVKADANLKPAQKVLFNQYRQSLNFIDKQIQAIVSELPSDTLVVITGVNGKIFTSNSDEAQRNLSPESV RVPMVIHWPNVGASKVKYRTSHYGVVPTLMTHILGCTNNTTDYSAGRSLLQPSQETWIYIGDSRIFAIYQQSEITVIDRH GKYRIYDENFEHRLHKKMSAPELIQVMREGRRLYNH
Sequences:
>Translated_596_residues MVERKKQMSRDRVSRLINWGHWFAFFNGLLAMIVGTRYLSSVGYPETWFGWGYLAVSTIGQFSFLAFIAYLICLFPLTLI LPYSKILRGLAAVIATLSLCILLYDTIVYADYGMHLSPFAFDLAWADLNALLHGTSYIVTPIAILVIELTAANFLWKRIE KIQKLNLGNKVITLIGVCFVSSHLIHIWADAADITEITRFDDTYPLSYPATARSFMESHGIDGSSQSDDEANHATSTLSY PTQPLQCQADSKPNVLMLTIDSLRADMVDAKTMPFLHQYTEQNQSFTQHYSGGNQFRTGMFSLLYGLQGSYGDARIFNST SPIMTQSFRQAGYQLGLFIPETNLNLRSAQAMFNDFTPVIAKETNGSADADLRSVGHFKQWQSEQQSPWFALVNLKAPEN FDTPVGFLGIETVKADANLKPAQKVLFNQYRQSLNFIDKQIQAIVSELPSDTLVVITGVNGKIFTSNSDEAQRNLSPESV RVPMVIHWPNVGASKVKYRTSHYGVVPTLMTHILGCTNNTTDYSAGRSLLQPSQETWIYIGDSRIFAIYQQSEITVIDRH GKYRIYDENFEHRLHKKMSAPELIQVMREGRRLYNH >Mature_596_residues MVERKKQMSRDRVSRLINWGHWFAFFNGLLAMIVGTRYLSSVGYPETWFGWGYLAVSTIGQFSFLAFIAYLICLFPLTLI LPYSKILRGLAAVIATLSLCILLYDTIVYADYGMHLSPFAFDLAWADLNALLHGTSYIVTPIAILVIELTAANFLWKRIE KIQKLNLGNKVITLIGVCFVSSHLIHIWADAADITEITRFDDTYPLSYPATARSFMESHGIDGSSQSDDEANHATSTLSY PTQPLQCQADSKPNVLMLTIDSLRADMVDAKTMPFLHQYTEQNQSFTQHYSGGNQFRTGMFSLLYGLQGSYGDARIFNST SPIMTQSFRQAGYQLGLFIPETNLNLRSAQAMFNDFTPVIAKETNGSADADLRSVGHFKQWQSEQQSPWFALVNLKAPEN FDTPVGFLGIETVKADANLKPAQKVLFNQYRQSLNFIDKQIQAIVSELPSDTLVVITGVNGKIFTSNSDEAQRNLSPESV RVPMVIHWPNVGASKVKYRTSHYGVVPTLMTHILGCTNNTTDYSAGRSLLQPSQETWIYIGDSRIFAIYQQSEITVIDRH GKYRIYDENFEHRLHKKMSAPELIQVMREGRRLYNH
Specific function: Unknown
COG id: COG3083
COG function: function code R; Predicted hydrolase of alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0842 [H]
Homologues:
Organism=Escherichia coli, GI1788515, Length=605, Percent_Identity=30.9090909090909, Blast_Score=293, Evalue=3e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012159 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 67248; Mature: 67248
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERKKQMSRDRVSRLINWGHWFAFFNGLLAMIVGTRYLSSVGYPETWFGWGYLAVSTIG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH QFSFLAFIAYLICLFPLTLILPYSKILRGLAAVIATLSLCILLYDTIVYADYGMHLSPFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH FDLAWADLNALLHGTSYIVTPIAILVIELTAANFLWKRIEKIQKLNLGNKVITLIGVCFV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SSHLIHIWADAADITEITRFDDTYPLSYPATARSFMESHGIDGSSQSDDEANHATSTLSY HHCHHEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCC PTQPLQCQADSKPNVLMLTIDSLRADMVDAKTMPFLHQYTEQNQSFTQHYSGGNQFRTGM CCCCCEECCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHCCCCCHHHHHH FSLLYGLQGSYGDARIFNSTSPIMTQSFRQAGYQLGLFIPETNLNLRSAQAMFNDFTPVI HHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEE AKETNGSADADLRSVGHFKQWQSEQQSPWFALVNLKAPENFDTPVGFLGIETVKADANLK EECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCC PAQKVLFNQYRQSLNFIDKQIQAIVSELPSDTLVVITGVNGKIFTSNSDEAQRNLSPESV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCHHHHHCCCCCCE RVPMVIHWPNVGASKVKYRTSHYGVVPTLMTHILGCTNNTTDYSAGRSLLQPSQETWIYI EEEEEEECCCCCCHHEEEECCCCCHHHHHHHHHHCCCCCCCCHHHCHHHHCCCCCCEEEE GDSRIFAIYQQSEITVIDRHGKYRIYDENFEHRLHKKMSAPELIQVMREGRRLYNH CCCEEEEEEECCCEEEEECCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MVERKKQMSRDRVSRLINWGHWFAFFNGLLAMIVGTRYLSSVGYPETWFGWGYLAVSTIG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH QFSFLAFIAYLICLFPLTLILPYSKILRGLAAVIATLSLCILLYDTIVYADYGMHLSPFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH FDLAWADLNALLHGTSYIVTPIAILVIELTAANFLWKRIEKIQKLNLGNKVITLIGVCFV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SSHLIHIWADAADITEITRFDDTYPLSYPATARSFMESHGIDGSSQSDDEANHATSTLSY HHCHHEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCC PTQPLQCQADSKPNVLMLTIDSLRADMVDAKTMPFLHQYTEQNQSFTQHYSGGNQFRTGM CCCCCEECCCCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHCCCCCHHHHHH FSLLYGLQGSYGDARIFNSTSPIMTQSFRQAGYQLGLFIPETNLNLRSAQAMFNDFTPVI HHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEE AKETNGSADADLRSVGHFKQWQSEQQSPWFALVNLKAPENFDTPVGFLGIETVKADANLK EECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCC PAQKVLFNQYRQSLNFIDKQIQAIVSELPSDTLVVITGVNGKIFTSNSDEAQRNLSPESV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCHHHHHCCCCCCE RVPMVIHWPNVGASKVKYRTSHYGVVPTLMTHILGCTNNTTDYSAGRSLLQPSQETWIYI EEEEEEECCCCCCHHEEEECCCCCHHHHHHHHHHCCCCCCCCHHHCHHHHCCCCCCEEEE GDSRIFAIYQQSEITVIDRHGKYRIYDENFEHRLHKKMSAPELIQVMREGRRLYNH CCCEEEEEEECCCEEEEECCCCEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]