| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921921
Identifier: 117921921
GI number: 117921921
Start: 4178287
End: 4178892
Strand: Direct
Name: 117921921
Synonym: Shewana3_3484
Alternate gene names: NA
Gene position: 4178287-4178892 (Clockwise)
Preceding gene: 117921920
Following gene: 117921923
Centisome position: 84.03
GC content: 47.03
Gene sequence:
>606_bases GTGGCTAAGTTATTAACCCAAGAACAATTTATCCGCGCCTATGAATGCGCCGAATTAGGCTGTATCGCCAACCATGACCG CCTCGCCCAATTGCTCGCCGATCCCGATTATGACGCTTTACATGAATACAGCGCCTACTTTGGCAAAGCGGCGACACAAA TCACCTGTATCAGTGACTTACAAAGTATGGAGGAATTGCATTTTGTCGCGGGCAACTTGAATTGGGATGACCATGATCCC GATATGGTGAGAGCAATTATCGAACACCCACTCTGCGATGCGGGTACCGCTTTATTGCTCTACTGGTACGGACAAGGCTT TTATTACTCCACGCCACAGAGGCTCGACACGCCTTTTGGACAGCTATTCAAAACCATCACCGAACGCTTTGTTGCGCGGG GCTATGCAAGTTATAGAATCCATTTTGATCCGTTTAAAGAATGTTTTATGCCCTCATTAGAGGACGTCCTCACCAATGGA TGCCAAATTCCAGGGGCCATTTTTGCCCCCTACAGCACCATGGAAATCGAAACTGATGCAGGGCATCCAAGGTATCTACA ATTTAAAAATGAGCAGCTGAAATCGGGAAAATGGGGTAACCAATAA
Upstream 100 bases:
>100_bases TGCAACAGCAAGCTTAGCACCTAACATCCTCACTCTTTCTCGCTGGCCCGCAGTTATCAGGGCTGGCGAGTGTCATTATT TAACAATCCCAAGGACGCCC
Downstream 100 bases:
>100_bases GCCCTAAGCTGTCTTTAAGTAGAACGCTTAAAGCCAAGCTATTAACGTGATTAAATAGGCGTTGCTGGCGGAATACGGGT AAAACGCTGCCAGCGACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MAKLLTQEQFIRAYECAELGCIANHDRLAQLLADPDYDALHEYSAYFGKAATQITCISDLQSMEELHFVAGNLNWDDHDP DMVRAIIEHPLCDAGTALLLYWYGQGFYYSTPQRLDTPFGQLFKTITERFVARGYASYRIHFDPFKECFMPSLEDVLTNG CQIPGAIFAPYSTMEIETDAGHPRYLQFKNEQLKSGKWGNQ
Sequences:
>Translated_201_residues MAKLLTQEQFIRAYECAELGCIANHDRLAQLLADPDYDALHEYSAYFGKAATQITCISDLQSMEELHFVAGNLNWDDHDP DMVRAIIEHPLCDAGTALLLYWYGQGFYYSTPQRLDTPFGQLFKTITERFVARGYASYRIHFDPFKECFMPSLEDVLTNG CQIPGAIFAPYSTMEIETDAGHPRYLQFKNEQLKSGKWGNQ >Mature_200_residues AKLLTQEQFIRAYECAELGCIANHDRLAQLLADPDYDALHEYSAYFGKAATQITCISDLQSMEELHFVAGNLNWDDHDPD MVRAIIEHPLCDAGTALLLYWYGQGFYYSTPQRLDTPFGQLFKTITERFVARGYASYRIHFDPFKECFMPSLEDVLTNGC QIPGAIFAPYSTMEIETDAGHPRYLQFKNEQLKSGKWGNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22971; Mature: 22840
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLLTQEQFIRAYECAELGCIANHDRLAQLLADPDYDALHEYSAYFGKAATQITCISDL CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QSMEELHFVAGNLNWDDHDPDMVRAIIEHPLCDAGTALLLYWYGQGFYYSTPQRLDTPFG HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHEEEEEECCCEEECCCHHHCCCHH QLFKTITERFVARGYASYRIHFDPFKECFMPSLEDVLTNGCQIPGAIFAPYSTMEIETDA HHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCHHHHHHCCCCCCCEEECCCCEEEEECCC GHPRYLQFKNEQLKSGKWGNQ CCCEEEEECCHHHCCCCCCCC >Mature Secondary Structure AKLLTQEQFIRAYECAELGCIANHDRLAQLLADPDYDALHEYSAYFGKAATQITCISDL CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QSMEELHFVAGNLNWDDHDPDMVRAIIEHPLCDAGTALLLYWYGQGFYYSTPQRLDTPFG HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHEEEEEECCCEEECCCHHHCCCHH QLFKTITERFVARGYASYRIHFDPFKECFMPSLEDVLTNGCQIPGAIFAPYSTMEIETDA HHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCHHHHHHCCCCCCCEEECCCCEEEEECCC GHPRYLQFKNEQLKSGKWGNQ CCCEEEEECCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA