| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is est [H]
Identifier: 117921923
GI number: 117921923
Start: 4180632
End: 4181546
Strand: Direct
Name: est [H]
Synonym: Shewana3_3486
Alternate gene names: 117921923
Gene position: 4180632-4181546 (Clockwise)
Preceding gene: 117921921
Following gene: 117921925
Centisome position: 84.08
GC content: 53.22
Gene sequence:
>915_bases ATGAGCCAACTCTATTTAGAAGACGGTATTAAACAATTAGCGAGCGAGTTTATCGCCGCAGGTTGCCCTTCGGTGCGCGA ACAGAGCCTTGAGGAGCGACGCCAAGGGTATATCGCCAGCACAGTATTGGCAGGTGAGCCGGAAGCTGTGTTTGAAGTTA AAACCCTATCCCTTGAGGGCATCGAATTAACGCTATTTAAACCCTCGGTGGACAACAACTTACCCGTGGTCATTTACTAT CACGGCGGCTGCTTTGTCAGTGGCGGCATCGCCACCCACAATCAACAACTGCGTAAAATCGCCAATGATTCCGGCGCGTT AGTGGTAGCGGTCAGCTATCGTCTCGCCCCAGAGCATGTGTACCCAGCAGCCCATGACGATGCCTTCAATGCCGCCAATC TCGTGCAACAACATTGCCAGCAATGGGGCGGTGATGACACCAATATCACCCTGATGGGCGACAGTGCTGGCGGCCATTTA GCCTTAGTCACTTGCCTGCGGTTAAAGGCACAAGGGCAATGGTTACCTAAAAAACAAGTGCTTATCTATCCGATGTTGGA TGCGACCGCCAAGAGTCAGAGCTATATCGACAATGGCGACAAGTACATTATCACCCGCGATACGCTGCTCACGGGCTTTG ATATGTACCTCGACTGGCACCCCAGAACCGACGTTGAAGCCAGCCCACTGCGCAGCCACGACCTAGCCGGTTTACCCGAA ACCCACATTATTACCGCCGAGTTCGATCCGCTGTTAGATGAGGGCGAACAGCTGTTCCGTAACCTATTAGATGCGGGCGT CAATGCCCATTGCCGCCGCTATTTAGGGGTGATCCACGGCTTCTTCCAACTCGCTGGCGTCAGCCAATCGGCGCGGGATG CCATGGTGCAGATAACCCACATTATTCGCGTTTAA
Upstream 100 bases:
>100_bases ATCGTCCAATACGCACTACCCTTTTCAGCATCGAGCCGATACACTTTGCCGACCACAAGGGGCGATAAGCGCTCACCGAA TATATTCAGGGAAACTGCAC
Downstream 100 bases:
>100_bases CCTCAGTAAGCCGCATGCCTTAATGCGGGGCATGCGGCGATTGAATCCATTCAACGAATAACCTATTGCATGATAACGCA ATGCTCTACTGCGCTATTTC
Product: alpha/beta hydrolase domain-containing protein
Products: alcohol; a carboxylate [C]
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSQLYLEDGIKQLASEFIAAGCPSVREQSLEERRQGYIASTVLAGEPEAVFEVKTLSLEGIELTLFKPSVDNNLPVVIYY HGGCFVSGGIATHNQQLRKIANDSGALVVAVSYRLAPEHVYPAAHDDAFNAANLVQQHCQQWGGDDTNITLMGDSAGGHL ALVTCLRLKAQGQWLPKKQVLIYPMLDATAKSQSYIDNGDKYIITRDTLLTGFDMYLDWHPRTDVEASPLRSHDLAGLPE THIITAEFDPLLDEGEQLFRNLLDAGVNAHCRRYLGVIHGFFQLAGVSQSARDAMVQITHIIRV
Sequences:
>Translated_304_residues MSQLYLEDGIKQLASEFIAAGCPSVREQSLEERRQGYIASTVLAGEPEAVFEVKTLSLEGIELTLFKPSVDNNLPVVIYY HGGCFVSGGIATHNQQLRKIANDSGALVVAVSYRLAPEHVYPAAHDDAFNAANLVQQHCQQWGGDDTNITLMGDSAGGHL ALVTCLRLKAQGQWLPKKQVLIYPMLDATAKSQSYIDNGDKYIITRDTLLTGFDMYLDWHPRTDVEASPLRSHDLAGLPE THIITAEFDPLLDEGEQLFRNLLDAGVNAHCRRYLGVIHGFFQLAGVSQSARDAMVQITHIIRV >Mature_303_residues SQLYLEDGIKQLASEFIAAGCPSVREQSLEERRQGYIASTVLAGEPEAVFEVKTLSLEGIELTLFKPSVDNNLPVVIYYH GGCFVSGGIATHNQQLRKIANDSGALVVAVSYRLAPEHVYPAAHDDAFNAANLVQQHCQQWGGDDTNITLMGDSAGGHLA LVTCLRLKAQGQWLPKKQVLIYPMLDATAKSQSYIDNGDKYIITRDTLLTGFDMYLDWHPRTDVEASPLRSHDLAGLPET HIITAEFDPLLDEGEQLFRNLLDAGVNAHCRRYLGVIHGFFQLAGVSQSARDAMVQITHIIRV
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Secreted (Potential). Note=External to the cytoplasmic membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI206597554, Length=282, Percent_Identity=28.7234042553192, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI21328446, Length=109, Percent_Identity=34.8623853211009, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI61966717, Length=315, Percent_Identity=25.0793650793651, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI157041239, Length=286, Percent_Identity=24.4755244755245, Blast_Score=72, Evalue=7e-13, Organism=Escherichia coli, GI1786682, Length=282, Percent_Identity=26.9503546099291, Blast_Score=87, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71996133, Length=141, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI72001146, Length=150, Percent_Identity=32, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17540028, Length=123, Percent_Identity=34.9593495934959, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17567059, Length=208, Percent_Identity=25, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: 3.1.1.- [C]
Molecular weight: Translated: 33488; Mature: 33357
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLYLEDGIKQLASEFIAAGCPSVREQSLEERRQGYIASTVLAGEPEAVFEVKTLSLEG CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEECC IELTLFKPSVDNNLPVVIYYHGGCFVSGGIATHNQQLRKIANDSGALVVAVSYRLAPEHV EEEEEECCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCC YPAAHDDAFNAANLVQQHCQQWGGDDTNITLMGDSAGGHLALVTCLRLKAQGQWLPKKQV CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCE LIYPMLDATAKSQSYIDNGDKYIITRDTLLTGFDMYLDWHPRTDVEASPLRSHDLAGLPE EEEEECCCCCCCCHHHCCCCEEEEEECHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCC THIITAEFDPLLDEGEQLFRNLLDAGVNAHCRRYLGVIHGFFQLAGVSQSARDAMVQITH CEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IIRV HHCC >Mature Secondary Structure SQLYLEDGIKQLASEFIAAGCPSVREQSLEERRQGYIASTVLAGEPEAVFEVKTLSLEG CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEEEECC IELTLFKPSVDNNLPVVIYYHGGCFVSGGIATHNQQLRKIANDSGALVVAVSYRLAPEHV EEEEEECCCCCCCCCEEEEECCCEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCC YPAAHDDAFNAANLVQQHCQQWGGDDTNITLMGDSAGGHLALVTCLRLKAQGQWLPKKQV CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCE LIYPMLDATAKSQSYIDNGDKYIITRDTLLTGFDMYLDWHPRTDVEASPLRSHDLAGLPE EEEEECCCCCCCCHHHCCCCEEEEEECHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCC THIITAEFDPLLDEGEQLFRNLLDAGVNAHCRRYLGVIHGFFQLAGVSQSARDAMVQITH CEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH IIRV HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Carboxylic ester; H2O [C]
Specific reaction: Carboxylic ester + H2O = an alcohol + carboxylate [C]
General reaction: Hydrolase; Acting on ester bonds; Carboxylic ester hydrolases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2545531 [H]