| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921885
Identifier: 117921885
GI number: 117921885
Start: 4131429
End: 4131998
Strand: Direct
Name: 117921885
Synonym: Shewana3_3448
Alternate gene names: NA
Gene position: 4131429-4131998 (Clockwise)
Preceding gene: 117921884
Following gene: 117921886
Centisome position: 83.09
GC content: 37.54
Gene sequence:
>570_bases ATGTCAGAATTTAAGTACGAAATTATTGCTCTAGAGGGTTCAACAGAGATAGATTACAGAGCATATTTTGATGGGAAAGC TTGTGATTTATCTGAAGTTTCAGGTCATATTGCGAAACGAAGAGCATCACTTCAACTAATACTTGCTGATATAAGAGAAT GTCACGAAATACTTAACTCAATGAGAAATCATGAAGACTTGTCTAGTCATTTATATAAAGCCTTTGTGATTACTTACAGT AAATGTTTTGCTAGTGGCGCTGTACGAGGGTTATCTTTAGATTCAAAGCGAGTATACAAATCTGCTCCTGATCTGCTAAA GCTTCATGACCATGTGTACAAAATGAGAAATACTTATATCGCTCATGCAGATAATTCAGCTTGTGAGCAGGCCGAGGTCT ATTTTGTCAAACACGAAAACATCTCAGAAGTGTTTGTGCCAACTAGCAAGTACTCAGCGCCATGGTCGCATAGTTTCGAG GAGCTATTTAGTTTAATCAATGAGTTGTATGCTCATGTTGCTGAACAAACTCGCAAGGTTGATTCGAAAATTACGGAGCA ATTTGCCTAA
Upstream 100 bases:
>100_bases AAACGCTATAAAATCAATTGACTATAGTAGCAGACTTTTAGTTAATAGGTTTGAAAAACGCGCATGCGCATGAATAAAAT GTTAGGCAAATGGATGAACT
Downstream 100 bases:
>100_bases CAAACAATTTAAGAGTGATTCAGCACGCTTGGCATTTTTGGTTTGGGTTAAGTTTAGTGTCTACGGTGGTCAAATTTAGT GTCGTGGTCGCGTGCTTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSEFKYEIIALEGSTEIDYRAYFDGKACDLSEVSGHIAKRRASLQLILADIRECHEILNSMRNHEDLSSHLYKAFVITYS KCFASGAVRGLSLDSKRVYKSAPDLLKLHDHVYKMRNTYIAHADNSACEQAEVYFVKHENISEVFVPTSKYSAPWSHSFE ELFSLINELYAHVAEQTRKVDSKITEQFA
Sequences:
>Translated_189_residues MSEFKYEIIALEGSTEIDYRAYFDGKACDLSEVSGHIAKRRASLQLILADIRECHEILNSMRNHEDLSSHLYKAFVITYS KCFASGAVRGLSLDSKRVYKSAPDLLKLHDHVYKMRNTYIAHADNSACEQAEVYFVKHENISEVFVPTSKYSAPWSHSFE ELFSLINELYAHVAEQTRKVDSKITEQFA >Mature_188_residues SEFKYEIIALEGSTEIDYRAYFDGKACDLSEVSGHIAKRRASLQLILADIRECHEILNSMRNHEDLSSHLYKAFVITYSK CFASGAVRGLSLDSKRVYKSAPDLLKLHDHVYKMRNTYIAHADNSACEQAEVYFVKHENISEVFVPTSKYSAPWSHSFEE LFSLINELYAHVAEQTRKVDSKITEQFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21667; Mature: 21535
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEFKYEIIALEGSTEIDYRAYFDGKACDLSEVSGHIAKRRASLQLILADIRECHEILNS CCCCEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRNHEDLSSHLYKAFVITYSKCFASGAVRGLSLDSKRVYKSAPDLLKLHDHVYKMRNTYI HHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCEE AHADNSACEQAEVYFVKHENISEVFVPTSKYSAPWSHSFEELFSLINELYAHVAEQTRKV EECCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DSKITEQFA HHHHHHHCC >Mature Secondary Structure SEFKYEIIALEGSTEIDYRAYFDGKACDLSEVSGHIAKRRASLQLILADIRECHEILNS CCCEEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MRNHEDLSSHLYKAFVITYSKCFASGAVRGLSLDSKRVYKSAPDLLKLHDHVYKMRNTYI HHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCEE AHADNSACEQAEVYFVKHENISEVFVPTSKYSAPWSHSFEELFSLINELYAHVAEQTRKV EECCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH DSKITEQFA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA