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The map label for this gene is rsmC [H]

Identifier: 117921884

GI number: 117921884

Start: 4129854

End: 4130915

Strand: Direct

Name: rsmC [H]

Synonym: Shewana3_3447

Alternate gene names: 117921884

Gene position: 4129854-4130915 (Clockwise)

Preceding gene: 117921883

Following gene: 117921885

Centisome position: 83.06

GC content: 51.22

Gene sequence:

>1062_bases
ATGCCCGCACTTATTTTTTACGGTAGCCATGCAGTGTTAACGAATCCATCGCAAGTCATTATCCGCAATCAGGAAACCCT
GAGCCAACATAGAGTCTTAGTGCTAAACCATGAGGCAGACTCATTGCCCAAAGCACTGCTCGATGTCGCCCAGTCCGTCG
ATGCCCTCGCCTTGGATTATCACCATTACCTGCATTTAGCGCCGCAGGCTAATGCCAAACTGCGCTGCTATTTTGGCCAT
CAACTGCCCCACCAGGATAAGTACGACACTGTAATTGTGTACTTTCCTAAGGCTAAGCCGTTAGCCCCTTACTTGTTTAA
TCTGGCCGCTCAGCATTTAGTAGCAGATGGTCAACTCTTAGTCGTGGGTGAGAACAAAGGCGGGGTTAAATCCTTAGTCA
AACTGTTGCCGAAATACTTTGCCACCGGCGTCAAACTCGATAACGCGCGCCATTGCCTACTCTTCGGCAGCAGCCTAATC
GATACTGCACCCGAGATTAAACTCAGCGATTGGACTAGCCAGTATCAACTCTCCACTCCGCAGGGCAATATCACCATCTG
CAACTTAGTCGGCGTGTTCAGCGAGAAGCATTTAGACCAAGGCACAGAGTTATTACTGTCGCATCTACCAACGCTCTCTG
GGCGAGTACTGGATTTTGGCTGCGGCGCCGGTGTGATTGCCGCTGCGCTGTTAAAGGCACAACCGACACTGTCGCTAGAA
TGTATTGATATCAATGCCATGGCGCTGGCCTCCTGCGAACTTACGCTGGCGGCAAACGGCATGACGGCCAAGGTCTATCC
CTCCGATGGACTGGCGCAAACCAGTGGAAAATTCGACGGTATTATCTCCAATCCCCCGTTCCACGATGGCCTTGCCAGCA
CGACCAGCATTGCCCAAAGATTTGTCGCCGATAGCGCCAAGCAATTACAATCTAAAGGGATTTGGCAAATCGTCACTAAC
CGCCACCTACCCTATTCGGACACCATCGCCGCCGAGTTCGGCCAATTAACCGTGCCAGCAGAGAACAACAAGTACAAACT
CTATTCCTTCCAACAGGCCTAA

Upstream 100 bases:

>100_bases
TTTATTGGCTTTCATTCCACACCATTCTAGTGAGCGCTGTTTTGCTACATCCCTTCAGTCGGCGGCATGCAGGCTGGCTC
GCAGCCGAATAAGGGGTATA

Downstream 100 bases:

>100_bases
TCTTTCGCCCCACTCAATTGTGAGTGGGGCATCCTTAATTTGACTCTAGGATGCACTAAGGAATAAAGGCTCGTTAAGAA
TGACGAAGATAACGCCGTCC

Product: 16S rRNA m(2)G 1207 methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MPALIFYGSHAVLTNPSQVIIRNQETLSQHRVLVLNHEADSLPKALLDVAQSVDALALDYHHYLHLAPQANAKLRCYFGH
QLPHQDKYDTVIVYFPKAKPLAPYLFNLAAQHLVADGQLLVVGENKGGVKSLVKLLPKYFATGVKLDNARHCLLFGSSLI
DTAPEIKLSDWTSQYQLSTPQGNITICNLVGVFSEKHLDQGTELLLSHLPTLSGRVLDFGCGAGVIAAALLKAQPTLSLE
CIDINAMALASCELTLAANGMTAKVYPSDGLAQTSGKFDGIISNPPFHDGLASTTSIAQRFVADSAKQLQSKGIWQIVTN
RHLPYSDTIAAEFGQLTVPAENNKYKLYSFQQA

Sequences:

>Translated_353_residues
MPALIFYGSHAVLTNPSQVIIRNQETLSQHRVLVLNHEADSLPKALLDVAQSVDALALDYHHYLHLAPQANAKLRCYFGH
QLPHQDKYDTVIVYFPKAKPLAPYLFNLAAQHLVADGQLLVVGENKGGVKSLVKLLPKYFATGVKLDNARHCLLFGSSLI
DTAPEIKLSDWTSQYQLSTPQGNITICNLVGVFSEKHLDQGTELLLSHLPTLSGRVLDFGCGAGVIAAALLKAQPTLSLE
CIDINAMALASCELTLAANGMTAKVYPSDGLAQTSGKFDGIISNPPFHDGLASTTSIAQRFVADSAKQLQSKGIWQIVTN
RHLPYSDTIAAEFGQLTVPAENNKYKLYSFQQA
>Mature_352_residues
PALIFYGSHAVLTNPSQVIIRNQETLSQHRVLVLNHEADSLPKALLDVAQSVDALALDYHHYLHLAPQANAKLRCYFGHQ
LPHQDKYDTVIVYFPKAKPLAPYLFNLAAQHLVADGQLLVVGENKGGVKSLVKLLPKYFATGVKLDNARHCLLFGSSLID
TAPEIKLSDWTSQYQLSTPQGNITICNLVGVFSEKHLDQGTELLLSHLPTLSGRVLDFGCGAGVIAAALLKAQPTLSLEC
IDINAMALASCELTLAANGMTAKVYPSDGLAQTSGKFDGIISNPPFHDGLASTTSIAQRFVADSAKQLQSKGIWQIVTNR
HLPYSDTIAAEFGQLTVPAENNKYKLYSFQQA

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=341, Percent_Identity=36.6568914956012, Blast_Score=194, Evalue=9e-51,
Organism=Escherichia coli, GI87082206, Length=190, Percent_Identity=32.6315789473684, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 38344; Mature: 38213

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALIFYGSHAVLTNPSQVIIRNQETLSQHRVLVLNHEADSLPKALLDVAQSVDALALDY
CCEEEEECCEEEEECCCEEEEECHHHHHHCEEEEEECCHHHHHHHHHHHHHCHHHEEEEE
HHYLHLAPQANAKLRCYFGHQLPHQDKYDTVIVYFPKAKPLAPYLFNLAAQHLVADGQLL
EHEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEE
VVGENKGGVKSLVKLLPKYFATGVKLDNARHCLLFGSSLIDTAPEIKLSDWTSQYQLSTP
EEECCCCCHHHHHHHHHHHHHCCEEECCCCEEEEECCHHHCCCCCEEECCCCCCEEEECC
QGNITICNLVGVFSEKHLDQGTELLLSHLPTLSGRVLDFGCGAGVIAAALLKAQPTLSLE
CCCEEEEEEEHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEE
CIDINAMALASCELTLAANGMTAKVYPSDGLAQTSGKFDGIISNPPFHDGLASTTSIAQR
EEECCEEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHH
FVADSAKQLQSKGIWQIVTNRHLPYSDTIAAEFGQLTVPAENNKYKLYSFQQA
HHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCCEEEECCCCCCEEEEEECCC
>Mature Secondary Structure 
PALIFYGSHAVLTNPSQVIIRNQETLSQHRVLVLNHEADSLPKALLDVAQSVDALALDY
CEEEEECCEEEEECCCEEEEECHHHHHHCEEEEEECCHHHHHHHHHHHHHCHHHEEEEE
HHYLHLAPQANAKLRCYFGHQLPHQDKYDTVIVYFPKAKPLAPYLFNLAAQHLVADGQLL
EHEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEE
VVGENKGGVKSLVKLLPKYFATGVKLDNARHCLLFGSSLIDTAPEIKLSDWTSQYQLSTP
EEECCCCCHHHHHHHHHHHHHCCEEECCCCEEEEECCHHHCCCCCEEECCCCCCEEEECC
QGNITICNLVGVFSEKHLDQGTELLLSHLPTLSGRVLDFGCGAGVIAAALLKAQPTLSLE
CCCEEEEEEEHHHHHHHHCHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEE
CIDINAMALASCELTLAANGMTAKVYPSDGLAQTSGKFDGIISNPPFHDGLASTTSIAQR
EEECCEEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHH
FVADSAKQLQSKGIWQIVTNRHLPYSDTIAAEFGQLTVPAENNKYKLYSFQQA
HHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCCEEEECCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]