Click here to switch to the map view.

The map label for this gene is 117921831

Identifier: 117921831

GI number: 117921831

Start: 4064315

End: 4064776

Strand: Direct

Name: 117921831

Synonym: Shewana3_3394

Alternate gene names: NA

Gene position: 4064315-4064776 (Clockwise)

Preceding gene: 117921830

Following gene: 117921835

Centisome position: 81.74

GC content: 51.08

Gene sequence:

>462_bases
ATGTCGGATGCAACCCCGCTAGACAGTCAAATTTGGCATTGGTGTGATATGAGTTACGGGCAAAATAAGCAGCTTTGCCT
TGAGCTACAGGATAACTGCCAAGTAAATGTGAATCTCTTACTGCTGGCGCAGTATTTAGATCTCACCAGCGATGTGGCGG
GCCCGCGGGAGTATTCGACCGAGCAGTGGCAGCAGCTGGTCAATGCGGTTTGGGATTGGGATGAAAAGTTTCTCACCCCC
TATCGTCGTCTGCGCCGTCTCGCTAAGGCAAGCCTGAATGAGGAAGAATACCAGCAGATGCTCGATGTTGAGCTGATGAT
GGAACGTAAGGCGCAGCGCACGATTCTAAATGCCGTCAATGGGTTATCGCCAACCGGCCAACAAACCAATCTGGTCAATT
ACCTCGCCCTATTTGGCCTATCCGCAGCGGATGTTAACGCACTGGATTTTATCGCGCCTTAA

Upstream 100 bases:

>100_bases
AAATGCAATGGCTTGAGCTGCAAGAAGAAATTGATGCTATGGAACTTGAGCTAATGGGCCAGTAATTGGCTCCTTATCGC
CTAACGTACAAGGAAACAGT

Downstream 100 bases:

>100_bases
TAGACCGAACATTACTTAGCACGAGCCTGAGGATAACGCTGACAGCTATCCCCAATCTTGAGCCAACTAGGCTGCTGCTC
GGTATAAATATGGTAATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSDATPLDSQIWHWCDMSYGQNKQLCLELQDNCQVNVNLLLLAQYLDLTSDVAGPREYSTEQWQQLVNAVWDWDEKFLTP
YRRLRRLAKASLNEEEYQQMLDVELMMERKAQRTILNAVNGLSPTGQQTNLVNYLALFGLSAADVNALDFIAP

Sequences:

>Translated_153_residues
MSDATPLDSQIWHWCDMSYGQNKQLCLELQDNCQVNVNLLLLAQYLDLTSDVAGPREYSTEQWQQLVNAVWDWDEKFLTP
YRRLRRLAKASLNEEEYQQMLDVELMMERKAQRTILNAVNGLSPTGQQTNLVNYLALFGLSAADVNALDFIAP
>Mature_152_residues
SDATPLDSQIWHWCDMSYGQNKQLCLELQDNCQVNVNLLLLAQYLDLTSDVAGPREYSTEQWQQLVNAVWDWDEKFLTPY
RRLRRLAKASLNEEEYQQMLDVELMMERKAQRTILNAVNGLSPTGQQTNLVNYLALFGLSAADVNALDFIAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17602; Mature: 17471

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDATPLDSQIWHWCDMSYGQNKQLCLELQDNCQVNVNLLLLAQYLDLTSDVAGPREYST
CCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCCH
EQWQQLVNAVWDWDEKFLTPYRRLRRLAKASLNEEEYQQMLDVELMMERKAQRTILNAVN
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLSPTGQQTNLVNYLALFGLSAADVNALDFIAP
CCCCCCCHHHHHHHHHHHCCCCCCCCCHHCCCC
>Mature Secondary Structure 
SDATPLDSQIWHWCDMSYGQNKQLCLELQDNCQVNVNLLLLAQYLDLTSDVAGPREYST
CCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCCH
EQWQQLVNAVWDWDEKFLTPYRRLRRLAKASLNEEEYQQMLDVELMMERKAQRTILNAVN
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLSPTGQQTNLVNYLALFGLSAADVNALDFIAP
CCCCCCCHHHHHHHHHHHCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA