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The map label for this gene is yheS [H]

Identifier: 117921830

GI number: 117921830

Start: 4062366

End: 4064279

Strand: Direct

Name: yheS [H]

Synonym: Shewana3_3393

Alternate gene names: 117921830

Gene position: 4062366-4064279 (Clockwise)

Preceding gene: 117921823

Following gene: 117921831

Centisome position: 81.7

GC content: 51.62

Gene sequence:

>1914_bases
ATGATCAGCATCAACCAAGCGCAATTAATCCGTGGCAGCAAAACCCTGCTCGACGAAGCCTCTTTGACCATCTATCCCGG
CCATAAGGTCGGCCTAGTCGGCGCCAATGGCACGGGTAAGTCCTCACTGCTGGCATTAATTATGGGTCACCTGAGCTTAG
ACAAAGGCGAGTTTAGTATGCCTTCGGGGTGGCAAATCGCCACCGTAGCTCAAGAAACCCCCGCGCTGGAAGTCTCTGCA
CTTGAGTATGTACTTGATGGTGATAAAGAATATCGCCAACTTGAGGCCGATTTACATATCGCACAGGAACACAATGATGG
CCATGCCATTGCCACCTTGCACGGAAAAATCGATGCCATTGGCGGCTACGCCATTCGTGCCCGAGCAGGTGCCTTGCTGG
CAGGTTTAGGCTTTAGCGAAGCCGAGCAAAATAACCCAGTGAAAAGCTTTTCGGGTGGTTGGCGGATGCGCCTCAACCTT
GCCCAAGCGCTGCTGTGCCGCTCCGACTTACTGCTGCTCGACGAACCGACCAACCACTTAGACTTAGATACAATGTACTG
GCTCGAAGGGTGGATTAAGTCCTATCAAGGCACGCTGATTTTAATCAGCCACGATAGGGATTTTATCGACGAGATTGTCG
ATGAAATCGTCCATGTCGAGAATCAAAAACTCAATTATTACAAAGGCAACTACAGTGCCTTTGAGCGCATCCGTGCCGAA
CGTATGGCGCAGCAACAGGTCGCCTATGAGCGCCAACAAAAAGAACGGGCGCATATGCAGTCCTTCGTCGACCGCTTCCG
CTACAAGGCCAGTAAAGCCAAGCAAGCACAGAGCCGCTTAAAGGCGCTGGAAAGGATGACTGAGCTATTGCCATCCCAGG
CCGATAGCCCGTTTTATATGGAGTTTCGCCCGCCAGAAGCCCTGCCCAATCCATTGATTAAAATGGAACAAGTGGCTGTG
GGTTATGGCGACAAGCAAATCTTAAGCCGTGTGCATTTGAACTTAGTCCCCGGCGCCCGTATTGGCCTCTTAGGGCGTAA
CGGCGCGGGTAAATCGACATTAATCAAACTGTTATCGGGACAACTATCACCGATGACTGGATTGTATGAGCCGAATCCCG
GCCTGAATATCGGTTACTTTGCCCAGCACCAAATCGAATTTTTACGCCTAGACGATACGCCGCTGCAACATCTGGTGCGC
CTCGCGCCAAATGCTCGTGAGCAGGAATTACGTAACTTCCTCGGTGGTTTTGGCTTCCATGGCGATATGGCGCTCTCGCC
AGTTCGTCCCTTCTCGGGGGGCGAGAAAGCGCGTTTAGTGTTGGCCTTATTAGTGTGGCAGCGCCCTAACCTATTACTGC
TCGACGAACCGACCAACCACTTAGATCTAGAGATGCGCCATGCGCTTACCATGGCATTACAAACCTTTGAAGGCGCAATG
GTTATCGTATCGCACGACCGTCACTTACTGCGCTTAACCTGTAGCGATTACTATCTGGTTGATCAAGGCCAAGTGCAGGC
CTTCGATGGTGATTTAGAGGATTACCACCAATGGTTACTCGATGCCGCTAAGGCCGCCAGTGCAAATTCCACCGTTAACG
GTGACGATGCCAAGCCCGCCGTCGATAAGAAACAGCAAAAGCGGTTAGAGGCAGAGCTGCGCCAAAAGGTGTCGCCACTT
AAACGCAAGCAGGCGAAGCTTGAAACCGATCAGCAAAAGCTCAGTGAACGCCTCGCCGAGTTGGAGCATCTACTGGCCGA
TAGCGAGCTCTACGATCAGGACAATAAAGCCAAACTCACGTCGGTACTCAGTGAGCGCACCAGCTTGACACAAACGCTAG
AAGAAAGTGAAATGCAATGGCTTGAGCTGCAAGAAGAAATTGATGCTATGGAACTTGAGCTAATGGGCCAGTAA

Upstream 100 bases:

>100_bases
AAGAAATCCTCAGCAACTCGGCCTAAGTTGTGGTTTGCCATCGGCTTGTACGTTATCATCACAGCCCTTACTCATTCATG
ATATGACCAAGTTGTAGTTA

Downstream 100 bases:

>100_bases
TTGGCTCCTTATCGCCTAACGTACAAGGAAACAGTATGTCGGATGCAACCCCGCTAGACAGTCAAATTTGGCATTGGTGT
GATATGAGTTACGGGCAAAA

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 637; Mature: 637

Protein sequence:

>637_residues
MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSMPSGWQIATVAQETPALEVSA
LEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAIGGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNL
AQALLCRSDLLLLDEPTNHLDLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNYYKGNYSAFERIRAE
RMAQQQVAYERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYMEFRPPEALPNPLIKMEQVAV
GYGDKQILSRVHLNLVPGARIGLLGRNGAGKSTLIKLLSGQLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVR
LAPNAREQELRNFLGGFGFHGDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEGAM
VIVSHDRHLLRLTCSDYYLVDQGQVQAFDGDLEDYHQWLLDAAKAASANSTVNGDDAKPAVDKKQQKRLEAELRQKVSPL
KRKQAKLETDQQKLSERLAELEHLLADSELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEIDAMELELMGQ

Sequences:

>Translated_637_residues
MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSMPSGWQIATVAQETPALEVSA
LEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAIGGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNL
AQALLCRSDLLLLDEPTNHLDLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNYYKGNYSAFERIRAE
RMAQQQVAYERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYMEFRPPEALPNPLIKMEQVAV
GYGDKQILSRVHLNLVPGARIGLLGRNGAGKSTLIKLLSGQLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVR
LAPNAREQELRNFLGGFGFHGDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEGAM
VIVSHDRHLLRLTCSDYYLVDQGQVQAFDGDLEDYHQWLLDAAKAASANSTVNGDDAKPAVDKKQQKRLEAELRQKVSPL
KRKQAKLETDQQKLSERLAELEHLLADSELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEIDAMELELMGQ
>Mature_637_residues
MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSMPSGWQIATVAQETPALEVSA
LEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAIGGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNL
AQALLCRSDLLLLDEPTNHLDLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNYYKGNYSAFERIRAE
RMAQQQVAYERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYMEFRPPEALPNPLIKMEQVAV
GYGDKQILSRVHLNLVPGARIGLLGRNGAGKSTLIKLLSGQLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVR
LAPNAREQELRNFLGGFGFHGDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEGAM
VIVSHDRHLLRLTCSDYYLVDQGQVQAFDGDLEDYHQWLLDAAKAASANSTVNGDDAKPAVDKKQQKRLEAELRQKVSPL
KRKQAKLETDQQKLSERLAELEHLLADSELYDQDNKAKLTSVLSERTSLTQTLEESEMQWLELQEEIDAMELELMGQ

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=519, Percent_Identity=38.728323699422, Blast_Score=383, Evalue=1e-106,
Organism=Homo sapiens, GI27881506, Length=514, Percent_Identity=37.15953307393, Blast_Score=334, Evalue=1e-91,
Organism=Homo sapiens, GI10947137, Length=514, Percent_Identity=37.15953307393, Blast_Score=334, Evalue=2e-91,
Organism=Homo sapiens, GI69354671, Length=530, Percent_Identity=35.4716981132075, Blast_Score=271, Evalue=1e-72,
Organism=Homo sapiens, GI10947135, Length=530, Percent_Identity=35.4716981132075, Blast_Score=271, Evalue=1e-72,
Organism=Escherichia coli, GI1789751, Length=633, Percent_Identity=62.4012638230648, Blast_Score=818, Evalue=0.0,
Organism=Escherichia coli, GI1787041, Length=516, Percent_Identity=35.2713178294574, Blast_Score=298, Evalue=6e-82,
Organism=Escherichia coli, GI1787182, Length=642, Percent_Identity=30.0623052959502, Blast_Score=243, Evalue=3e-65,
Organism=Escherichia coli, GI2367384, Length=537, Percent_Identity=30.1675977653631, Blast_Score=207, Evalue=2e-54,
Organism=Escherichia coli, GI1788165, Length=204, Percent_Identity=34.8039215686275, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1788506, Length=580, Percent_Identity=24.8275862068966, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1789891, Length=206, Percent_Identity=30.5825242718447, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI1787029, Length=224, Percent_Identity=29.0178571428571, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787758, Length=199, Percent_Identity=27.6381909547739, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17553372, Length=530, Percent_Identity=39.2452830188679, Blast_Score=389, Evalue=1e-108,
Organism=Caenorhabditis elegans, GI17555318, Length=521, Percent_Identity=34.5489443378119, Blast_Score=320, Evalue=2e-87,
Organism=Caenorhabditis elegans, GI17559834, Length=550, Percent_Identity=34.1818181818182, Blast_Score=311, Evalue=5e-85,
Organism=Saccharomyces cerevisiae, GI6321121, Length=540, Percent_Identity=37.2222222222222, Blast_Score=377, Evalue=1e-105,
Organism=Saccharomyces cerevisiae, GI6320874, Length=529, Percent_Identity=31.9470699432892, Blast_Score=288, Evalue=3e-78,
Organism=Saccharomyces cerevisiae, GI6325030, Length=388, Percent_Identity=33.5051546391753, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6323278, Length=612, Percent_Identity=25, Blast_Score=156, Evalue=7e-39,
Organism=Saccharomyces cerevisiae, GI6324314, Length=395, Percent_Identity=28.8607594936709, Blast_Score=142, Evalue=1e-34,
Organism=Drosophila melanogaster, GI24666836, Length=540, Percent_Identity=39.4444444444444, Blast_Score=394, Evalue=1e-110,
Organism=Drosophila melanogaster, GI24642252, Length=512, Percent_Identity=38.8671875, Blast_Score=360, Evalue=1e-99,
Organism=Drosophila melanogaster, GI18859989, Length=512, Percent_Identity=38.8671875, Blast_Score=360, Evalue=1e-99,
Organism=Drosophila melanogaster, GI24641342, Length=555, Percent_Identity=34.7747747747748, Blast_Score=324, Evalue=1e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 71550; Mature: 71550

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM
CCCCCHHHHHCCCHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC
PSGWQIATVAQETPALEVSALEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAI
CCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCEEEEECCCEECC
GGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL
CCEEEHHHHCHHHCCCCCCHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCEEEEECCCCCC
DLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNYYKGNYSAFERIRAE
CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHH
RMAQQQVAYERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
EFRPPEALPNPLIKMEQVAVGYGDKQILSRVHLNLVPGARIGLLGRNGAGKSTLIKLLSG
EECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHCC
QLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPNAREQELRNFLGGFGFH
CCCCCCCCCCCCCCCEECEEECCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCC
GDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEGAM
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEE
VIVSHDRHLLRLTCSDYYLVDQGQVQAFDGDLEDYHQWLLDAAKAASANSTVNGDDAKPA
EEEECCCEEEEEEECCEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VDKKQQKRLEAELRQKVSPLKRKQAKLETDQQKLSERLAELEHLLADSELYDQDNKAKLT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHH
SVLSERTSLTQTLEESEMQWLELQEEIDAMELELMGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCC
>Mature Secondary Structure
MISINQAQLIRGSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSM
CCCCCHHHHHCCCHHHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC
PSGWQIATVAQETPALEVSALEYVLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAI
CCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCEEEEECCCEECC
GGYAIRARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL
CCEEEHHHHCHHHCCCCCCHHCCCCCCCCCCCCCEEEHHHHHHHHHHCCEEEEECCCCCC
DLDTMYWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNYYKGNYSAFERIRAE
CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHH
RMAQQQVAYERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSQADSPFYM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
EFRPPEALPNPLIKMEQVAVGYGDKQILSRVHLNLVPGARIGLLGRNGAGKSTLIKLLSG
EECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHCC
QLSPMTGLYEPNPGLNIGYFAQHQIEFLRLDDTPLQHLVRLAPNAREQELRNFLGGFGFH
CCCCCCCCCCCCCCCEECEEECCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHCCCCCC
GDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEGAM
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEE
VIVSHDRHLLRLTCSDYYLVDQGQVQAFDGDLEDYHQWLLDAAKAASANSTVNGDDAKPA
EEEECCCEEEEEEECCEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VDKKQQKRLEAELRQKVSPLKRKQAKLETDQQKLSERLAELEHLLADSELYDQDNKAKLT
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHH
SVLSERTSLTQTLEESEMQWLELQEEIDAMELELMGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]