Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921828

Identifier: 117921828

GI number: 117921828

Start: 4060832

End: 4061092

Strand: Reverse

Name: 117921828

Synonym: Shewana3_3391

Alternate gene names: NA

Gene position: 4061092-4060832 (Counterclockwise)

Preceding gene: 117921829

Following gene: 117921827

Centisome position: 81.68

GC content: 46.74

Gene sequence:

>261_bases
ATGCACATCGATCAAACAGCGAAGAACTACTTGCTTGATTTAGGCAATATTCTTAGCGAGTACGCAGTTGAGGCCAAGGT
AGATGCGCTGGCAAAATCAGAGACTCAAGGCCATGATTTTGCACAAGGCTATCTTATGGGCTTACATCGTGTGATTACGC
TCATGCAACAACAGGCAGAGGCGTTCAGTCTGTCACTTGCGGACGTCGGTCTAGCAAAGATCGACGAGGATTTCTTCTTT
GATAATCGGCGTGAGCTCTAA

Upstream 100 bases:

>100_bases
TTCTTTGCATACAGATAGTTAACCTTGCGCGTTTTCACTGGTCCAATGAGGTAAACGCGCATGCGCACGAATAAAATGTT
AGAGCTCACAGGAAGGTTCA

Downstream 100 bases:

>100_bases
CAATTCATTCAAGCCGACGCCGCTTCGCGGTGCGGCTTAATTCAGGCGTTACATGCTATGAGAAAAATAGTCATTCTATC
CATGATGATCTCAAATCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MHIDQTAKNYLLDLGNILSEYAVEAKVDALAKSETQGHDFAQGYLMGLHRVITLMQQQAEAFSLSLADVGLAKIDEDFFF
DNRREL

Sequences:

>Translated_86_residues
MHIDQTAKNYLLDLGNILSEYAVEAKVDALAKSETQGHDFAQGYLMGLHRVITLMQQQAEAFSLSLADVGLAKIDEDFFF
DNRREL
>Mature_86_residues
MHIDQTAKNYLLDLGNILSEYAVEAKVDALAKSETQGHDFAQGYLMGLHRVITLMQQQAEAFSLSLADVGLAKIDEDFFF
DNRREL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9691; Mature: 9691

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIDQTAKNYLLDLGNILSEYAVEAKVDALAKSETQGHDFAQGYLMGLHRVITLMQQQAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AFSLSLADVGLAKIDEDFFFDNRREL
HHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHIDQTAKNYLLDLGNILSEYAVEAKVDALAKSETQGHDFAQGYLMGLHRVITLMQQQAE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AFSLSLADVGLAKIDEDFFFDNRREL
HHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA