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The map label for this gene is yafK [C]

Identifier: 117921827

GI number: 117921827

Start: 4060301

End: 4060774

Strand: Reverse

Name: yafK [C]

Synonym: Shewana3_3390

Alternate gene names: 117921827

Gene position: 4060774-4060301 (Counterclockwise)

Preceding gene: 117921828

Following gene: 117921826

Centisome position: 81.67

GC content: 39.45

Gene sequence:

>474_bases
ATGAGAAAAATAGTCATTCTATCCATGATGATCTCAAATCTTGCTTTCGCAGAGGTAGATCTCGTTAAAGTGGATAAATC
GGAGAGCAAGATGTACTTGCTTGATGGTGAGCAGGTCATAAAAGAATATCATGTGGCCTTTGGTGCTAACCCAAAAGGCC
ATAAGCAAAAAGAAGGTGATGAGAAAACACCCGAAGGATCATACACTTTAGATTATAAGAAGGAAGATTCATCCTTTTAT
AGGGCAATGCATATTAATTATCCAAATGCTCAAGATGAGGCCAATGCGAAGAAGTTAGGTGTTTCTCCCGGTGGCTTTAT
CATGGTTCATGGGCAGCGTAACAAGCTGGGCTGGCTTTCGTTTATTACTCAGCGTTTTAATTGGACAAACGGTTGCATTG
CTTTAACCAATTCAGAAATGGATGAATTCATGGAATTAGTAAATGTCGGCACCAAAATTGAAATTCAGTGGTAG

Upstream 100 bases:

>100_bases
GATCGACGAGGATTTCTTCTTTGATAATCGGCGTGAGCTCTAACAATTCATTCAAGCCGACGCCGCTTCGCGGTGCGGCT
TAATTCAGGCGTTACATGCT

Downstream 100 bases:

>100_bases
GCATGTAACAAGCACAGGCAGCAGGACTCGCCTGGCGGCTCGCCTCTGCTGTGAGCGTTATATGCACAAGGAGTACAAGC
ATTGTTCAATAAATTAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MRKIVILSMMISNLAFAEVDLVKVDKSESKMYLLDGEQVIKEYHVAFGANPKGHKQKEGDEKTPEGSYTLDYKKEDSSFY
RAMHINYPNAQDEANAKKLGVSPGGFIMVHGQRNKLGWLSFITQRFNWTNGCIALTNSEMDEFMELVNVGTKIEIQW

Sequences:

>Translated_157_residues
MRKIVILSMMISNLAFAEVDLVKVDKSESKMYLLDGEQVIKEYHVAFGANPKGHKQKEGDEKTPEGSYTLDYKKEDSSFY
RAMHINYPNAQDEANAKKLGVSPGGFIMVHGQRNKLGWLSFITQRFNWTNGCIALTNSEMDEFMELVNVGTKIEIQW
>Mature_157_residues
MRKIVILSMMISNLAFAEVDLVKVDKSESKMYLLDGEQVIKEYHVAFGANPKGHKQKEGDEKTPEGSYTLDYKKEDSSFY
RAMHINYPNAQDEANAKKLGVSPGGFIMVHGQRNKLGWLSFITQRFNWTNGCIALTNSEMDEFMELVNVGTKIEIQW

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786418, Length=122, Percent_Identity=31.1475409836066, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17902; Mature: 17902

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIVILSMMISNLAFAEVDLVKVDKSESKMYLLDGEQVIKEYHVAFGANPKGHKQKEGD
CCEEEEHHHHHHHCCHHEEEEEEECCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCC
EKTPEGSYTLDYKKEDSSFYRAMHINYPNAQDEANAKKLGVSPGGFIMVHGQRNKLGWLS
CCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCEEEEECCCCCCHHHH
FITQRFNWTNGCIALTNSEMDEFMELVNVGTKIEIQW
HHHHHCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MRKIVILSMMISNLAFAEVDLVKVDKSESKMYLLDGEQVIKEYHVAFGANPKGHKQKEGD
CCEEEEHHHHHHHCCHHEEEEEEECCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCC
EKTPEGSYTLDYKKEDSSFYRAMHINYPNAQDEANAKKLGVSPGGFIMVHGQRNKLGWLS
CCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCEEEEECCCCCCHHHH
FITQRFNWTNGCIALTNSEMDEFMELVNVGTKIEIQW
HHHHHCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA