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The map label for this gene is nqrC [H]

Identifier: 117921813

GI number: 117921813

Start: 4046484

End: 4047278

Strand: Reverse

Name: nqrC [H]

Synonym: Shewana3_3376

Alternate gene names: 117921813

Gene position: 4047278-4046484 (Counterclockwise)

Preceding gene: 117921814

Following gene: 117921812

Centisome position: 81.4

GC content: 49.18

Gene sequence:

>795_bases
ATGGTATTTAAGAAAGATACTGTGGTGGGGACCATGATCTTCACCATCACGCTCTGCCTTTTGTGCTCCTTTATGATCAC
CGGCACCGCAGGCGTATTGAAAGAGCGTAAGCTCGCAAAAAAACGCGATGAGTTACAACGTTATGTGTTGATGGCGGCCG
ATGTGAATATTGGCCAAGGCAATGAGTTTAGAGATATTTTTGCTAAATCCGTTAAGCCATTATTGATTAATCTCGACACA
GGCAAAGTGGACTCTGATGCCAATGTACTCGACTTTGACGAGCGCATGGCGGCGATTAACCCAGAAACCTCAAGCGCCCC
TAAAAAGGATATCGCCAAAATCAAGACCCGCGCCAACGATGCCCGTGTGTTTAAGGTGTTCGATGATAGCGGCAAGTTAT
CCAGCGTGGTCGTGCCTTTCTATGGTAAAGGACTGTGGTCGATGATCTACGGTTACGTGGCCGTTGAGCCTGACTTTAAC
ACCATTAAAGGCATGGTGGTTTACGAGCACGGTGAAACCCCTGGTATCGGTGACTTTGTGACTGACCCACATTGGTTATC
CCTGTGGAAGGGTAAACAACTCTTTGATGAAAAAGGCAAGTTTGCGATGCGCCTCGTGAAAGGCGGCGCCAAAGAGGGCG
ATGTGCACGGTGTTGATGCTGTGAGTGGCGCGACTATGACTGGCCGTGGCGTGCAGCGCGCAATGGAGTTTTGGTTTGGC
GTCGAGGGTTTCCAAACCTTCTTCAACCAATTAAAAGCATCGGCTGATCAAGGTGAGTTGGGAGGTGCAAAATGA

Upstream 100 bases:

>100_bases
CCAGAAGGCGTGATGTTAGCCATCCTGTTCGCCAACCTGTGGGCGCCGCTGTTCGATTATCTGGTGGCCCGTGCCAACAT
CAAACGGAGAGTAAAACGTC

Downstream 100 bases:

>100_bases
GCAACAGTTTATCCATGCGGGACATGCTAGCAGGCCCTGTATTTGCCAATAACCCAGTGGCGATGCAAGTGCTGGGCGTA
TGTTCGGCGCTGGCGGTGAG

Product: Na(+)-translocating NADH-quinone reductase subunit C

Products: NA

Alternate protein names: Na(+)-NQR subunit C; Na(+)-translocating NQR subunit C; NQR complex subunit C; NQR-1 subunit C [H]

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MVFKKDTVVGTMIFTITLCLLCSFMITGTAGVLKERKLAKKRDELQRYVLMAADVNIGQGNEFRDIFAKSVKPLLINLDT
GKVDSDANVLDFDERMAAINPETSSAPKKDIAKIKTRANDARVFKVFDDSGKLSSVVVPFYGKGLWSMIYGYVAVEPDFN
TIKGMVVYEHGETPGIGDFVTDPHWLSLWKGKQLFDEKGKFAMRLVKGGAKEGDVHGVDAVSGATMTGRGVQRAMEFWFG
VEGFQTFFNQLKASADQGELGGAK

Sequences:

>Translated_264_residues
MVFKKDTVVGTMIFTITLCLLCSFMITGTAGVLKERKLAKKRDELQRYVLMAADVNIGQGNEFRDIFAKSVKPLLINLDT
GKVDSDANVLDFDERMAAINPETSSAPKKDIAKIKTRANDARVFKVFDDSGKLSSVVVPFYGKGLWSMIYGYVAVEPDFN
TIKGMVVYEHGETPGIGDFVTDPHWLSLWKGKQLFDEKGKFAMRLVKGGAKEGDVHGVDAVSGATMTGRGVQRAMEFWFG
VEGFQTFFNQLKASADQGELGGAK
>Mature_264_residues
MVFKKDTVVGTMIFTITLCLLCSFMITGTAGVLKERKLAKKRDELQRYVLMAADVNIGQGNEFRDIFAKSVKPLLINLDT
GKVDSDANVLDFDERMAAINPETSSAPKKDIAKIKTRANDARVFKVFDDSGKLSSVVVPFYGKGLWSMIYGYVAVEPDFN
TIKGMVVYEHGETPGIGDFVTDPHWLSLWKGKQLFDEKGKFAMRLVKGGAKEGDVHGVDAVSGATMTGRGVQRAMEFWFG
VEGFQTFFNQLKASADQGELGGAK

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiqui

COG id: COG2869

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007329
- InterPro:   IPR010204 [H]

Pfam domain/function: PF04205 FMN_bind [H]

EC number: NA

Molecular weight: Translated: 29032; Mature: 29032

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFKKDTVVGTMIFTITLCLLCSFMITGTAGVLKERKLAKKRDELQRYVLMAADVNIGQG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
NEFRDIFAKSVKPLLINLDTGKVDSDANVLDFDERMAAINPETSSAPKKDIAKIKTRAND
CHHHHHHHHCCCEEEEECCCCCCCCCCCEEEHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
ARVFKVFDDSGKLSSVVVPFYGKGLWSMIYGYVAVEPDFNTIKGMVVYEHGETPGIGDFV
CEEEEEECCCCCEEEEEECHHCCHHHHHHHHHEEECCCCHHEEEEEEEECCCCCCCCCCC
TDPHWLSLWKGKQLFDEKGKFAMRLVKGGAKEGDVHGVDAVSGATMTGRGVQRAMEFWFG
CCCHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
VEGFQTFFNQLKASADQGELGGAK
HHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVFKKDTVVGTMIFTITLCLLCSFMITGTAGVLKERKLAKKRDELQRYVLMAADVNIGQG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
NEFRDIFAKSVKPLLINLDTGKVDSDANVLDFDERMAAINPETSSAPKKDIAKIKTRAND
CHHHHHHHHCCCEEEEECCCCCCCCCCCEEEHHHHHHCCCCCCCCCCHHHHHHHHHCCCC
ARVFKVFDDSGKLSSVVVPFYGKGLWSMIYGYVAVEPDFNTIKGMVVYEHGETPGIGDFV
CEEEEEECCCCCEEEEEECHHCCHHHHHHHHHEEECCCCHHEEEEEEEECCCCCCCCCCC
TDPHWLSLWKGKQLFDEKGKFAMRLVKGGAKEGDVHGVDAVSGATMTGRGVQRAMEFWFG
CCCHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC
VEGFQTFFNQLKASADQGELGGAK
HHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA