| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921801
Identifier: 117921801
GI number: 117921801
Start: 4033311
End: 4033607
Strand: Reverse
Name: 117921801
Synonym: Shewana3_3363
Alternate gene names: NA
Gene position: 4033607-4033311 (Counterclockwise)
Preceding gene: 117921803
Following gene: 117921800
Centisome position: 81.12
GC content: 45.45
Gene sequence:
>297_bases ATGGCATTCGTAAAATCAACTCGTCGCTTTAAGCCCAAATTTTTACAAGTCTATGAAGTACAAAAAGGTCTTAAGATTAA TCATGGGATGCACTTTGTACTTACCTTAATCACCTTTGGGTTATGGGGGCTGGTTTGGTGGTATTTGATCCTCAAATCGC AGGGGGATAACCAGTCACTCTTCAGCGGTTTTGACGATGACTATTGGAGCTACCTTATCGAGTGCGAGCAGCCGCCCGCA TCCCTTTATCGCCAACGTTTTGCCGCCTCAGTCAATTCGGTGCAATTTGAGGCCTAG
Upstream 100 bases:
>100_bases GCGTTTCAAATCCTGCTTTAATCACGGCTAATTTTTGTACGACTAAAGTCTAATCTGCTAGGCTTGAATAAGGTTTTCAC CCTAAGGGAGTGGTGCGATT
Downstream 100 bases:
>100_bases GCTTTGCCTTAGCTGGATTTTGCAGCGGTTGGCATCAACGTGATATAGATCATCCTTAGAATTTTATCCCTTATGTTAGA CTCGGCGGCTGGCTAAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MAFVKSTRRFKPKFLQVYEVQKGLKINHGMHFVLTLITFGLWGLVWWYLILKSQGDNQSLFSGFDDDYWSYLIECEQPPA SLYRQRFAASVNSVQFEA
Sequences:
>Translated_98_residues MAFVKSTRRFKPKFLQVYEVQKGLKINHGMHFVLTLITFGLWGLVWWYLILKSQGDNQSLFSGFDDDYWSYLIECEQPPA SLYRQRFAASVNSVQFEA >Mature_97_residues AFVKSTRRFKPKFLQVYEVQKGLKINHGMHFVLTLITFGLWGLVWWYLILKSQGDNQSLFSGFDDDYWSYLIECEQPPAS LYRQRFAASVNSVQFEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11533; Mature: 11402
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFVKSTRRFKPKFLQVYEVQKGLKINHGMHFVLTLITFGLWGLVWWYLILKSQGDNQSL CCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH FSGFDDDYWSYLIECEQPPASLYRQRFAASVNSVQFEA HCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEECC >Mature Secondary Structure AFVKSTRRFKPKFLQVYEVQKGLKINHGMHFVLTLITFGLWGLVWWYLILKSQGDNQSL CCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH FSGFDDDYWSYLIECEQPPASLYRQRFAASVNSVQFEA HCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA