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The map label for this gene is 117921782

Identifier: 117921782

GI number: 117921782

Start: 4013434

End: 4014258

Strand: Direct

Name: 117921782

Synonym: Shewana3_3344

Alternate gene names: NA

Gene position: 4013434-4014258 (Clockwise)

Preceding gene: 117921778

Following gene: 117921783

Centisome position: 80.72

GC content: 52.48

Gene sequence:

>825_bases
ATGATGAGCATTAATCGACGCCAAGCATTAACTCGCATTATCGGTATCAGCACGGCGGCTGCGGGCGCAACTTTAATGGG
TACGTCAGCATTTGCGGCAACCAATGCCGACGGTCAATATCAATTAGCCCTCGGGGAAAAACTCAAATATGTGCCACTCG
ATGCCATGGCAACCGCAAAACTTGCCTACGAGACGGGTGGCGGCTGTATGCACCAAGTGTTTCACTCGGTTATCACTATG
CTAGCGCAATCTAATAGTGCCGATGCCGACAAATTTAAAACCATTCCCACCGCCCTTGCGGGGTATGGTTTTGCTGGGGT
CACAGGCCAAGGCACACTCTGTGGTAACCTCAACGCTATTGGTATGTTAGTCAACATCTTAGATGATATTAACGGCCAGA
ATAGCGCGGTTATCGCCAATACCTTCCGTTACTATGAAAACACCACCTTGCCACTATCGACCCCTGAGTTCGTTGCAGGT
ATCGGCTCGACAGCGGAAAAAACCGCCCTTGTAGGTAGCTCATCGAAAGCCATGAGTGTGCTGTGCCACTCCTCCATCAG
TAACTGGTCACGGGCTTCTGGCCTGCCCTTCGCCAAGAAGGGTGAGCGCTGCTATCGCCTATCGGCCTCTATGGCCTATT
ACTTGGTGGAACTGCTAAACCGTGCCTATCAGGGCGAGAATATTGGCGCCCTCCCCGGCACCAAACCCTCACTGGAAGCG
CAGGATTGCCAAGTCTGCCACGGCAGCACCAGCACCTTAGGTTCGGCGGCAAGTGTTAAAACCGATATGGAATGCACCAC
GTGCCACACTGGCCACTTCAATTAA

Upstream 100 bases:

>100_bases
GCCGCAAATCACACTATTTATTGCTGTAGTTTCTAGAATGATGCCATCAACCAATGGTTACTGATTGATAAATAAAAGCA
ATTAATAAAAGAGGATATTC

Downstream 100 bases:

>100_bases
GGAGGCAGTGATGAAATACCCATTACTCGCATTAACCCTAGGTACACTCATCCTTGTCGGCTGTGGTAGTGATGATGATA
AATCCGAGGAGGTCACGCCT

Product: cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MMSINRRQALTRIIGISTAAAGATLMGTSAFAATNADGQYQLALGEKLKYVPLDAMATAKLAYETGGGCMHQVFHSVITM
LAQSNSADADKFKTIPTALAGYGFAGVTGQGTLCGNLNAIGMLVNILDDINGQNSAVIANTFRYYENTTLPLSTPEFVAG
IGSTAEKTALVGSSSKAMSVLCHSSISNWSRASGLPFAKKGERCYRLSASMAYYLVELLNRAYQGENIGALPGTKPSLEA
QDCQVCHGSTSTLGSAASVKTDMECTTCHTGHFN

Sequences:

>Translated_274_residues
MMSINRRQALTRIIGISTAAAGATLMGTSAFAATNADGQYQLALGEKLKYVPLDAMATAKLAYETGGGCMHQVFHSVITM
LAQSNSADADKFKTIPTALAGYGFAGVTGQGTLCGNLNAIGMLVNILDDINGQNSAVIANTFRYYENTTLPLSTPEFVAG
IGSTAEKTALVGSSSKAMSVLCHSSISNWSRASGLPFAKKGERCYRLSASMAYYLVELLNRAYQGENIGALPGTKPSLEA
QDCQVCHGSTSTLGSAASVKTDMECTTCHTGHFN
>Mature_274_residues
MMSINRRQALTRIIGISTAAAGATLMGTSAFAATNADGQYQLALGEKLKYVPLDAMATAKLAYETGGGCMHQVFHSVITM
LAQSNSADADKFKTIPTALAGYGFAGVTGQGTLCGNLNAIGMLVNILDDINGQNSAVIANTFRYYENTTLPLSTPEFVAG
IGSTAEKTALVGSSSKAMSVLCHSSISNWSRASGLPFAKKGERCYRLSASMAYYLVELLNRAYQGENIGALPGTKPSLEA
QDCQVCHGSTSTLGSAASVKTDMECTTCHTGHFN

Specific function: Diheme cytochrome c which may be involved in sulfate reduction [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010181
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09719 C_GCAxxG_C_C [H]

EC number: NA

Molecular weight: Translated: 28697; Mature: 28697

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSINRRQALTRIIGISTAAAGATLMGTSAFAATNADGQYQLALGEKLKYVPLDAMATAK
CCCCHHHHHHHHHHHHHHHHCCCHHCCCCHHEECCCCCEEEEEECCCEEECCCCHHHHHH
LAYETGGGCMHQVFHSVITMLAQSNSADADKFKTIPTALAGYGFAGVTGQGTLCGNLNAI
HEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHH
GMLVNILDDINGQNSAVIANTFRYYENTTLPLSTPEFVAGIGSTAEKTALVGSSSKAMSV
HHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCHHHHHHCCCCHHHHEEECCCCHHHHH
LCHSSISNWSRASGLPFAKKGERCYRLSASMAYYLVELLNRAYQGENIGALPGTKPSLEA
HHHHHHCCCHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
QDCQVCHGSTSTLGSAASVKTDMECTTCHTGHFN
CCHHEECCCCCCCCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MMSINRRQALTRIIGISTAAAGATLMGTSAFAATNADGQYQLALGEKLKYVPLDAMATAK
CCCCHHHHHHHHHHHHHHHHCCCHHCCCCHHEECCCCCEEEEEECCCEEECCCCHHHHHH
LAYETGGGCMHQVFHSVITMLAQSNSADADKFKTIPTALAGYGFAGVTGQGTLCGNLNAI
HEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHH
GMLVNILDDINGQNSAVIANTFRYYENTTLPLSTPEFVAGIGSTAEKTALVGSSSKAMSV
HHHHHHHHHCCCCCCEEEEEEHHHHCCCCCCCCCHHHHHHCCCCHHHHEEECCCCHHHHH
LCHSSISNWSRASGLPFAKKGERCYRLSASMAYYLVELLNRAYQGENIGALPGTKPSLEA
HHHHHHCCCHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
QDCQVCHGSTSTLGSAASVKTDMECTTCHTGHFN
CCHHEECCCCCCCCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9346301; 1646022 [H]