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The map label for this gene is 117921778

Identifier: 117921778

GI number: 117921778

Start: 4008025

End: 4010259

Strand: Direct

Name: 117921778

Synonym: Shewana3_3340

Alternate gene names: NA

Gene position: 4008025-4010259 (Clockwise)

Preceding gene: 117921777

Following gene: 117921782

Centisome position: 80.61

GC content: 50.92

Gene sequence:

>2235_bases
ATGCTGAAAAAGAACCCTAGCCTACACCCACTCGCGCCATTACTTTCATTGACCCAAGGGTTGCATTGGTCTCACCAACG
CCTGTTGGCTGTCGCGAGCCAGTTATCTATGCTGGTGATAGGTATGATTATTTTAACCAACTTAATCATTACCTTAGGTG
AACGCCGGTTACAGGAAGAATGGGCAACCCAAAGATACAGCGAATTACAAACCATAGGCACGCTGATCACGGATAAGGTC
GCCTTCCAGCAGTTTCGCACTCAGCTATTTGCCAAAGACGAATTACTCAAGCAGTACCTCAAAAATCCAACGGCCTCGTC
TCAGCAGAAATTGCAGGAAAGTTGGCAGGAGCTAGTGCAGCATATTCCTGAACTCCTCGGCATTGCCCTGTTCGATCCCC
AAGGTAATTATAAGTTTGCGACACCTTCAAACTTTAGTCAGGACGCGCTGCCCGCCGCTCTGTTAGGTTCGAGCCGCAAC
TTAGGTGGTAAAGAAGTCTTTACCTCGCCCTTGGAGTTTGTGCCCCTCAATGGCATGCTCGAACCCTACATGTATCAAAT
GACTTGGCTCGAGAAACCCGATCAAAGCTCGCTAGGTTACTTGATTACCTACAACTCGATTGTGCAGATGCTAGAAGCGA
TAAAACCTGCATTTTCAAGCAATAAGTCTCCGATGCTAGTGCTAGATACCCAAGGCTTGCTCTATGCGGGTGTGAGTGAA
CTCGCGCCCTTAACCCATATTCCCGATACCTTAGGCGCCAGTCTGCGCCAGAGTTATCCGGCGCTATGGCGGGAAATGTC
GATGAGCAACTTTGGCCAATTTCATGGTGAAGATGCCACCTTCGTGTACCTCAAAGTCGAGTTAACCAATCAGCCCGAAC
TGCGCCGCGAGTATTTTTTACTCTCTTATATCCGCAATGCCGATATCGCCTCCAAGTTTTCCCAGTGGCAAAACATCGTT
ATCGTCGCCGCGTTAATCCTGACCTTACTCGCCGCTTGGGTGATCTTACTCAGCCATATGTATCGCCTGCAGTATCGCTC
GCGCCAATACAGTATCGATGTGGCCAATGCACTATTTAACAATGATATCGGCTTTATCCTCGCCAATGAGCAGGCACGGA
TCATCAGTGCCAACCCTAAGGCGGCCGAGGCGACTCAAGTGCCACAGGATGAACTCACAGATCGCAGCCTGCAGCGCGCG
CTGAATCTCGACGACCTGACCCACGCGCAAATGCTCGACCAAGTGCATAGACAAGGTGAGTGGCAAGGCAAGCTGTCGCT
AGACAATGATAAGGGCTCAAGACTTAGCGTGTGCGTACGCCAAGCGCCGAGATTGGGGCGCGGCTTACCGCATCTGTTAG
TCTCCCTTGAAGATATTAGCGCCATGATCGATTGCCAGAATCAAGCCTTCTTAAGCGACTTACTCTGCGATACGACTGTG
GCCACAGCGCTGACTGATGCCAATGGTAAGCTGATAAAAATCAATCCAGTATTCGATCAACTGATGCAACTGAATGGCGA
TTTGAATCATGATTTAGCCTCACTGCTCGCCAACGATCTGGGTAACCAGTGGCAGCGGATCACCGCTCAGATCAGCATGC
AAGGTCAATGGCAAGGGCAGATCCTCTGCTCGCCCAATCTGCGCCATTCGAATTGTTTACAGGCCACCTTAAAGGGGCAT
GTGGCCGCCGACGGTGAGATTGATTACATCATCTGTACCTTAGAGCAAGCCGCCGATAACCTGAGGGGCGCAGAGCCGCG
CAGCTTTGTGCCGCACCGCAGCACCATTTTGCAGCATCTCGCCGATTTAGAACGCTATTTTGCATCGCTTTCGCCCCAAA
GCCGCAACCACTCAAGCCTGCTAGTGATGGATATCAACCCCGAGGGTTTACTCAGCCATATGAGTGATATCGACCAACTC
GAGACGCGTCAGCAGGAAGTGGAAGTGCAGCTCTTGCTCGAGATCCCTACCCACTACCAAATCCTTCACTGGCAACTCGG
TAAACTGTTGTTGTTACTGCCAGATACCGATGCCACGGCGGCACATCACTTTGCCCTCAATACCATAGAAAAGCTCAACA
GCAATGGCTTAGGTGAAGGGATTAGCATTGGGATTGCCAGCTATCAGGAAGGACAAAGCCTAGAGCAATACCTCAGCAAT
GCCGAGGTGGCGCTCAAACGGGCGAAGCAGAATAACGATCAGAATATCGGCCAGGCCTTTACTCGTCAGCCTTAG

Upstream 100 bases:

>100_bases
TGCTCGGCATAACAGAGTCGCCGAGCAACTTGCCACTGTCGTAACATTTCATTCGTGTTAACATAGCCTAATTAACAGTT
AATCAACCCCAAATCGGCCC

Downstream 100 bases:

>100_bases
CGGGCGGATTAAAGGAATCGGGTAGCTTACTTTGGGTGATCTCGATAATGGCCGAGCGGTTCATGGTGATTTTGTAGCGC
GCGTATTCAGGCTCTTCTCG

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: Diguanylate Cyclase; PAS/PAC Sensor Protein

Number of amino acids: Translated: 744; Mature: 744

Protein sequence:

>744_residues
MLKKNPSLHPLAPLLSLTQGLHWSHQRLLAVASQLSMLVIGMIILTNLIITLGERRLQEEWATQRYSELQTIGTLITDKV
AFQQFRTQLFAKDELLKQYLKNPTASSQQKLQESWQELVQHIPELLGIALFDPQGNYKFATPSNFSQDALPAALLGSSRN
LGGKEVFTSPLEFVPLNGMLEPYMYQMTWLEKPDQSSLGYLITYNSIVQMLEAIKPAFSSNKSPMLVLDTQGLLYAGVSE
LAPLTHIPDTLGASLRQSYPALWREMSMSNFGQFHGEDATFVYLKVELTNQPELRREYFLLSYIRNADIASKFSQWQNIV
IVAALILTLLAAWVILLSHMYRLQYRSRQYSIDVANALFNNDIGFILANEQARIISANPKAAEATQVPQDELTDRSLQRA
LNLDDLTHAQMLDQVHRQGEWQGKLSLDNDKGSRLSVCVRQAPRLGRGLPHLLVSLEDISAMIDCQNQAFLSDLLCDTTV
ATALTDANGKLIKINPVFDQLMQLNGDLNHDLASLLANDLGNQWQRITAQISMQGQWQGQILCSPNLRHSNCLQATLKGH
VAADGEIDYIICTLEQAADNLRGAEPRSFVPHRSTILQHLADLERYFASLSPQSRNHSSLLVMDINPEGLLSHMSDIDQL
ETRQQEVEVQLLLEIPTHYQILHWQLGKLLLLLPDTDATAAHHFALNTIEKLNSNGLGEGISIGIASYQEGQSLEQYLSN
AEVALKRAKQNNDQNIGQAFTRQP

Sequences:

>Translated_744_residues
MLKKNPSLHPLAPLLSLTQGLHWSHQRLLAVASQLSMLVIGMIILTNLIITLGERRLQEEWATQRYSELQTIGTLITDKV
AFQQFRTQLFAKDELLKQYLKNPTASSQQKLQESWQELVQHIPELLGIALFDPQGNYKFATPSNFSQDALPAALLGSSRN
LGGKEVFTSPLEFVPLNGMLEPYMYQMTWLEKPDQSSLGYLITYNSIVQMLEAIKPAFSSNKSPMLVLDTQGLLYAGVSE
LAPLTHIPDTLGASLRQSYPALWREMSMSNFGQFHGEDATFVYLKVELTNQPELRREYFLLSYIRNADIASKFSQWQNIV
IVAALILTLLAAWVILLSHMYRLQYRSRQYSIDVANALFNNDIGFILANEQARIISANPKAAEATQVPQDELTDRSLQRA
LNLDDLTHAQMLDQVHRQGEWQGKLSLDNDKGSRLSVCVRQAPRLGRGLPHLLVSLEDISAMIDCQNQAFLSDLLCDTTV
ATALTDANGKLIKINPVFDQLMQLNGDLNHDLASLLANDLGNQWQRITAQISMQGQWQGQILCSPNLRHSNCLQATLKGH
VAADGEIDYIICTLEQAADNLRGAEPRSFVPHRSTILQHLADLERYFASLSPQSRNHSSLLVMDINPEGLLSHMSDIDQL
ETRQQEVEVQLLLEIPTHYQILHWQLGKLLLLLPDTDATAAHHFALNTIEKLNSNGLGEGISIGIASYQEGQSLEQYLSN
AEVALKRAKQNNDQNIGQAFTRQP
>Mature_744_residues
MLKKNPSLHPLAPLLSLTQGLHWSHQRLLAVASQLSMLVIGMIILTNLIITLGERRLQEEWATQRYSELQTIGTLITDKV
AFQQFRTQLFAKDELLKQYLKNPTASSQQKLQESWQELVQHIPELLGIALFDPQGNYKFATPSNFSQDALPAALLGSSRN
LGGKEVFTSPLEFVPLNGMLEPYMYQMTWLEKPDQSSLGYLITYNSIVQMLEAIKPAFSSNKSPMLVLDTQGLLYAGVSE
LAPLTHIPDTLGASLRQSYPALWREMSMSNFGQFHGEDATFVYLKVELTNQPELRREYFLLSYIRNADIASKFSQWQNIV
IVAALILTLLAAWVILLSHMYRLQYRSRQYSIDVANALFNNDIGFILANEQARIISANPKAAEATQVPQDELTDRSLQRA
LNLDDLTHAQMLDQVHRQGEWQGKLSLDNDKGSRLSVCVRQAPRLGRGLPHLLVSLEDISAMIDCQNQAFLSDLLCDTTV
ATALTDANGKLIKINPVFDQLMQLNGDLNHDLASLLANDLGNQWQRITAQISMQGQWQGQILCSPNLRHSNCLQATLKGH
VAADGEIDYIICTLEQAADNLRGAEPRSFVPHRSTILQHLADLERYFASLSPQSRNHSSLLVMDINPEGLLSHMSDIDQL
ETRQQEVEVQLLLEIPTHYQILHWQLGKLLLLLPDTDATAAHHFALNTIEKLNSNGLGEGISIGIASYQEGQSLEQYLSN
AEVALKRAKQNNDQNIGQAFTRQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83427; Mature: 83427

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKNPSLHPLAPLLSLTQGLHWSHQRLLAVASQLSMLVIGMIILTNLIITLGERRLQEE
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WATQRYSELQTIGTLITDKVAFQQFRTQLFAKDELLKQYLKNPTASSQQKLQESWQELVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
HIPELLGIALFDPQGNYKFATPSNFSQDALPAALLGSSRNLGGKEVFTSPLEFVPLNGML
HHHHHHCEEEECCCCCEEECCCCCCCCHHCHHHHHCCCCCCCCHHHHCCCCCEECCCCCH
EPYMYQMTWLEKPDQSSLGYLITYNSIVQMLEAIKPAFSSNKSPMLVLDTQGLLYAGVSE
HHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCHHH
LAPLTHIPDTLGASLRQSYPALWREMSMSNFGQFHGEDATFVYLKVELTNQPELRREYFL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHH
LSYIRNADIASKFSQWQNIVIVAALILTLLAAWVILLSHMYRLQYRSRQYSIDVANALFN
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHC
NDIGFILANEQARIISANPKAAEATQVPQDELTDRSLQRALNLDDLTHAQMLDQVHRQGE
CCCEEEEECCCCEEEECCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
WQGKLSLDNDKGSRLSVCVRQAPRLGRGLPHLLVSLEDISAMIDCQNQAFLSDLLCDTTV
CCCEEEECCCCCCHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ATALTDANGKLIKINPVFDQLMQLNGDLNHDLASLLANDLGNQWQRITAQISMQGQWQGQ
HHHEECCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEE
ILCSPNLRHSNCLQATLKGHVAADGEIDYIICTLEQAADNLRGAEPRSFVPHRSTILQHL
EEECCCCCCHHHHHHHHHCCEECCCCEEEEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHH
ADLERYFASLSPQSRNHSSLLVMDINPEGLLSHMSDIDQLETRQQEVEVQLLLEIPTHYQ
HHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHH
ILHWQLGKLLLLLPDTDATAAHHFALNTIEKLNSNGLGEGISIGIASYQEGQSLEQYLSN
HHHEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHH
AEVALKRAKQNNDQNIGQAFTRQP
HHHHHHHHHCCCCCHHHHHHCCCC
>Mature Secondary Structure
MLKKNPSLHPLAPLLSLTQGLHWSHQRLLAVASQLSMLVIGMIILTNLIITLGERRLQEE
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WATQRYSELQTIGTLITDKVAFQQFRTQLFAKDELLKQYLKNPTASSQQKLQESWQELVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
HIPELLGIALFDPQGNYKFATPSNFSQDALPAALLGSSRNLGGKEVFTSPLEFVPLNGML
HHHHHHCEEEECCCCCEEECCCCCCCCHHCHHHHHCCCCCCCCHHHHCCCCCEECCCCCH
EPYMYQMTWLEKPDQSSLGYLITYNSIVQMLEAIKPAFSSNKSPMLVLDTQGLLYAGVSE
HHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCHHH
LAPLTHIPDTLGASLRQSYPALWREMSMSNFGQFHGEDATFVYLKVELTNQPELRREYFL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHHHH
LSYIRNADIASKFSQWQNIVIVAALILTLLAAWVILLSHMYRLQYRSRQYSIDVANALFN
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHC
NDIGFILANEQARIISANPKAAEATQVPQDELTDRSLQRALNLDDLTHAQMLDQVHRQGE
CCCEEEEECCCCEEEECCCCCCHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
WQGKLSLDNDKGSRLSVCVRQAPRLGRGLPHLLVSLEDISAMIDCQNQAFLSDLLCDTTV
CCCEEEECCCCCCHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ATALTDANGKLIKINPVFDQLMQLNGDLNHDLASLLANDLGNQWQRITAQISMQGQWQGQ
HHHEECCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEE
ILCSPNLRHSNCLQATLKGHVAADGEIDYIICTLEQAADNLRGAEPRSFVPHRSTILQHL
EEECCCCCCHHHHHHHHHCCEECCCCEEEEEEEEHHHHHHCCCCCCCCCCCCHHHHHHHH
ADLERYFASLSPQSRNHSSLLVMDINPEGLLSHMSDIDQLETRQQEVEVQLLLEIPTHYQ
HHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHH
ILHWQLGKLLLLLPDTDATAAHHFALNTIEKLNSNGLGEGISIGIASYQEGQSLEQYLSN
HHHEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHH
AEVALKRAKQNNDQNIGQAFTRQP
HHHHHHHHHCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA