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The map label for this gene is tonB [H]

Identifier: 117921674

GI number: 117921674

Start: 3881646

End: 3882521

Strand: Direct

Name: tonB [H]

Synonym: Shewana3_3236

Alternate gene names: 117921674

Gene position: 3881646-3882521 (Clockwise)

Preceding gene: 117921669

Following gene: 117921675

Centisome position: 78.07

GC content: 47.95

Gene sequence:

>876_bases
GTGACACCGAAACGATATCTGGTTTTTGGCGCATTAACCGTTGCAATCCAAACGGGTGTGATTGCATCGCAGCCTGCTAT
GCCATTACTAAGTAGTCTCAGTGAATCGACACAAATGACCGCATTCAAAGAAGCAAATAAAGCGGTTACCTTAAGCTTTG
CAACCCATAGTGCAGCAGAAAAATCAGCGGCCATATCAGCGATAAAAAATACGCCTGCAAATACGATTACCGAAGATGCG
ATTTCAACAAATGTGCCTAATACCAGTAAGCCCCAAACGGCGCCAACACTCACTGATACACCAGTAACTGAAATAGCAAG
GCAAGCACCCAAACCAACCAAAGCTAAGCCGCAAACGATTCAATCCGCAGTGCAAAACAAGCCAACGCCGAACACATCCT
CTAAGGCAGGTGCGACAACTGCCAAACCTCTTATGGCCGCAAATACACAACATCAGAAAGAAACTGGAGAGATAACAAAA
CCTTCTGACCAACTGTTGTCGCAAATGGCAGAAAGCAACACTCAAGATAAAACCGTTATTAACAATACCAATGTGACGCC
CACCAGTGTCAGCGAGAACACTAAAGCCACTCCCGAGGTTATCGAGCTGGCAACACCGACTTTTGCCAGTAAACCGCCGC
AACCCACCTACCCACGCATGGCACGTAAAAAAGGGCTTGAAGGCACGGCGACGGTAGAAGTGATGTTTAACGAATTTGGA
CAACAGCTCGCCCTCACCTTAGTGAAAAGCTCGGGCGTGGGGCTGCTAGATCAAGCGGCATTAGAGGCGGTTGAAACCTG
GGAGTTTCAAGCGCCCACCAACAAACTGGCCAGCCATTACAAGGTGAGAGTACCTATTCGCTTCGCCTTAAATTGA

Upstream 100 bases:

>100_bases
TCAAATGGAAATCATTATCATTTGCGATCTTATTTATATTCACGTATCTTAATTAGCATTGATTGATGGGCGACTGTTTT
TTGAACTTGGAAGGCGTACT

Downstream 100 bases:

>100_bases
ACGTCCCTAACCGCAGTATTCCAGTTATCGCTGATAGCTTGATAACCACTTATTTAATAACGAATTTGACCTAAGAGGTT
CAATTGCCCATGACTGACTT

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTPKRYLVFGALTVAIQTGVIASQPAMPLLSSLSESTQMTAFKEANKAVTLSFATHSAAEKSAAISAIKNTPANTITEDA
ISTNVPNTSKPQTAPTLTDTPVTEIARQAPKPTKAKPQTIQSAVQNKPTPNTSSKAGATTAKPLMAANTQHQKETGEITK
PSDQLLSQMAESNTQDKTVINNTNVTPTSVSENTKATPEVIELATPTFASKPPQPTYPRMARKKGLEGTATVEVMFNEFG
QQLALTLVKSSGVGLLDQAALEAVETWEFQAPTNKLASHYKVRVPIRFALN

Sequences:

>Translated_291_residues
MTPKRYLVFGALTVAIQTGVIASQPAMPLLSSLSESTQMTAFKEANKAVTLSFATHSAAEKSAAISAIKNTPANTITEDA
ISTNVPNTSKPQTAPTLTDTPVTEIARQAPKPTKAKPQTIQSAVQNKPTPNTSSKAGATTAKPLMAANTQHQKETGEITK
PSDQLLSQMAESNTQDKTVINNTNVTPTSVSENTKATPEVIELATPTFASKPPQPTYPRMARKKGLEGTATVEVMFNEFG
QQLALTLVKSSGVGLLDQAALEAVETWEFQAPTNKLASHYKVRVPIRFALN
>Mature_290_residues
TPKRYLVFGALTVAIQTGVIASQPAMPLLSSLSESTQMTAFKEANKAVTLSFATHSAAEKSAAISAIKNTPANTITEDAI
STNVPNTSKPQTAPTLTDTPVTEIARQAPKPTKAKPQTIQSAVQNKPTPNTSSKAGATTAKPLMAANTQHQKETGEITKP
SDQLLSQMAESNTQDKTVINNTNVTPTSVSENTKATPEVIELATPTFASKPPQPTYPRMARKKGLEGTATVEVMFNEFGQ
QLALTLVKSSGVGLLDQAALEAVETWEFQAPTNKLASHYKVRVPIRFALN

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 30959; Mature: 30828

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPKRYLVFGALTVAIQTGVIASQPAMPLLSSLSESTQMTAFKEANKAVTLSFATHSAAE
CCCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH
KSAAISAIKNTPANTITEDAISTNVPNTSKPQTAPTLTDTPVTEIARQAPKPTKAKPQTI
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHH
QSAVQNKPTPNTSSKAGATTAKPLMAANTQHQKETGEITKPSDQLLSQMAESNTQDKTVI
HHHHHCCCCCCCCCCCCCCHHCHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCEEE
NNTNVTPTSVSENTKATPEVIELATPTFASKPPQPTYPRMARKKGLEGTATVEVMFNEFG
CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH
QQLALTLVKSSGVGLLDQAALEAVETWEFQAPTNKLASHYKVRVPIRFALN
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCEEEEEEEEEECC
>Mature Secondary Structure 
TPKRYLVFGALTVAIQTGVIASQPAMPLLSSLSESTQMTAFKEANKAVTLSFATHSAAE
CCCCEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHH
KSAAISAIKNTPANTITEDAISTNVPNTSKPQTAPTLTDTPVTEIARQAPKPTKAKPQTI
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHH
QSAVQNKPTPNTSSKAGATTAKPLMAANTQHQKETGEITKPSDQLLSQMAESNTQDKTVI
HHHHHCCCCCCCCCCCCCCHHCHHHHCCCCHHHHCCCCCCCHHHHHHHHHHCCCCCCEEE
NNTNVTPTSVSENTKATPEVIELATPTFASKPPQPTYPRMARKKGLEGTATVEVMFNEFG
CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH
QQLALTLVKSSGVGLLDQAALEAVETWEFQAPTNKLASHYKVRVPIRFALN
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9781885; 10952301 [H]