| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is fadD [H]
Identifier: 117921669
GI number: 117921669
Start: 3874299
End: 3875903
Strand: Direct
Name: fadD [H]
Synonym: Shewana3_3231
Alternate gene names: 117921669
Gene position: 3874299-3875903 (Clockwise)
Preceding gene: 117921668
Following gene: 117921674
Centisome position: 77.92
GC content: 47.85
Gene sequence:
>1605_bases ATGGCATACGATCAAGAGTCACAACTCGAACTTGGCAAATACTCATCACTCATAGACTTAATCGAACGCACTAGCCAACG CTTTGGTGATAAAACGGCATATGCTTGTTTGGGGAAAACCAGCAGCTTCAATGATATAGAGCGCGATTCACGCTATTTTG CCGCCTATTTGCAGAATAACACTAACCTAAAACCCGGCGATCGGATCGCGATTCAATTACCCAATATTACCCAGTTCGTT ATCGCCGCCTATGGTGCGCTGCGGGCGGGACTTATTCTAGTAAATACTAACCCGCTCTACACCGAAAGAGAGCTTATTCA TCAGTTTAATGACTCTGGTGCTAAGGCCTTAGTGGTGCTGTCGGATCTGCTGCCGACCCTTGCCAAAGTGGTTGCGACCA CACCGATTGAATTGGTGATTTCGACCCACCCATTAGATCTTATCGACCCACAAGTTCAGCCCAAAACGGGGCTTAAAAAT GTCGAATTCTGCCAAGTGCTAAAACAAGGGGCAGAGCTACCCTTTAGCCGTTTTGTTCCCGCAGCAAATGATTTAGCGGC GTTGCAATATACCGGTGGTACCACGGGCCTCTCCAAAGGAGCCATGCTGACCCACGGTAATATGCTCGCCAATGCGGCGC AGGTAAAATCTCGTATCGGCAGTGTTATCACCGAGGGGGAAGATATTTTTGTCGCGCCATTGCCGATTTACCATATCTAC GCCTTTATGGTGAACTTAGTGCTGTATTTTGAATGTGGTGGTTGCTCGGTATTAATTCCCAATCCCCGTGATATTAGTGG CTTAATCAAGACACTGGCGAAATACCCTTTTACCGGTTTTGCAGGGCTTAACACCCTCTTTGTAGCTTTGTGTCATCAGC CCGAATTTAAGGCGCTGGATTTTAGTCATTTAAAAATCACTATTTCGGGTGGTACTGCACTCACCGCTGCCGCAGCCAAT ATCTGGCAGCAAACCACGGGCAATACCATCAGTGAAGGTTATGGGTTATCCGAAACCTCGCCGGTAATTTCACTCAATGC CCCCGGATATCAGAAGATTGGCACTATCGGTAAGCCCGTTCTCGGCACTGAGGTCAAACTGTTAGACGAAAACGGCAATG AAGTCGCACAAGGGGAAGCCGGTGAACTCGCCGCCCGCGGCCCACAAGTGATGCTAGGTTATTGGAATAATCCCCAAGAA ACGGCCAATGTGATGACTGCCGATGGTTTCTTTAAAACCGGGGATATTGCGATTTTGAACGAGGAAGGATTCCACCAAAT CGTTGATCGCAAAAAGGATATGATTATTGTCTCCGGCTTTAACGTCTATCCGAATGAGGTCGAAAACGTGCTCGCCAGCC ATCCGAATATCATTGAATGCGCCGTGGTTGGCGTAAAGGATGAACACTCGGGAGAAGCGGTCAAAGCCTTTGTTGTGCTA AAAGATGACAGCCAAGATCATGAGCAAATGAAAACCGCTATTCTTAACTTCTGCCGCGAGCAACTCACCGCCTACAAGCT GCCCAAGTTGATTGAATTTATGCCGCAGCTACCTAAGAGCACTGTGGGCAAAATTCTACGCAGAGAACTGAAACATCAGG CTTAA
Upstream 100 bases:
>100_bases TAACGATAAACGTTGACCTGACAGGTTGAATCCTTCTAATCTAAACACTCGTTTGATTTTAAAATAATAACAACGATAAA CCTATTTGAGGTAGTTAGGC
Downstream 100 bases:
>100_bases ACATACCTAAACATCAGTGATGTGTGAGCAGTCTTAAATCCAAAACAAAACCCCAGAGCAACACTCTGGGGTTTTATTTA CATGACATCCCCCATTCAAA
Product: AMP-dependent synthetase and ligase
Products: NA
Alternate protein names: Long-chain acyl-CoA synthetase; Acyl-CoA synthetase [H]
Number of amino acids: Translated: 534; Mature: 533
Protein sequence:
>534_residues MAYDQESQLELGKYSSLIDLIERTSQRFGDKTAYACLGKTSSFNDIERDSRYFAAYLQNNTNLKPGDRIAIQLPNITQFV IAAYGALRAGLILVNTNPLYTERELIHQFNDSGAKALVVLSDLLPTLAKVVATTPIELVISTHPLDLIDPQVQPKTGLKN VEFCQVLKQGAELPFSRFVPAANDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVITEGEDIFVAPLPIYHIY AFMVNLVLYFECGGCSVLIPNPRDISGLIKTLAKYPFTGFAGLNTLFVALCHQPEFKALDFSHLKITISGGTALTAAAAN IWQQTTGNTISEGYGLSETSPVISLNAPGYQKIGTIGKPVLGTEVKLLDENGNEVAQGEAGELAARGPQVMLGYWNNPQE TANVMTADGFFKTGDIAILNEEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIECAVVGVKDEHSGEAVKAFVVL KDDSQDHEQMKTAILNFCREQLTAYKLPKLIEFMPQLPKSTVGKILRRELKHQA
Sequences:
>Translated_534_residues MAYDQESQLELGKYSSLIDLIERTSQRFGDKTAYACLGKTSSFNDIERDSRYFAAYLQNNTNLKPGDRIAIQLPNITQFV IAAYGALRAGLILVNTNPLYTERELIHQFNDSGAKALVVLSDLLPTLAKVVATTPIELVISTHPLDLIDPQVQPKTGLKN VEFCQVLKQGAELPFSRFVPAANDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVITEGEDIFVAPLPIYHIY AFMVNLVLYFECGGCSVLIPNPRDISGLIKTLAKYPFTGFAGLNTLFVALCHQPEFKALDFSHLKITISGGTALTAAAAN IWQQTTGNTISEGYGLSETSPVISLNAPGYQKIGTIGKPVLGTEVKLLDENGNEVAQGEAGELAARGPQVMLGYWNNPQE TANVMTADGFFKTGDIAILNEEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIECAVVGVKDEHSGEAVKAFVVL KDDSQDHEQMKTAILNFCREQLTAYKLPKLIEFMPQLPKSTVGKILRRELKHQA >Mature_533_residues AYDQESQLELGKYSSLIDLIERTSQRFGDKTAYACLGKTSSFNDIERDSRYFAAYLQNNTNLKPGDRIAIQLPNITQFVI AAYGALRAGLILVNTNPLYTERELIHQFNDSGAKALVVLSDLLPTLAKVVATTPIELVISTHPLDLIDPQVQPKTGLKNV EFCQVLKQGAELPFSRFVPAANDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVITEGEDIFVAPLPIYHIYA FMVNLVLYFECGGCSVLIPNPRDISGLIKTLAKYPFTGFAGLNTLFVALCHQPEFKALDFSHLKITISGGTALTAAAANI WQQTTGNTISEGYGLSETSPVISLNAPGYQKIGTIGKPVLGTEVKLLDENGNEVAQGEAGELAARGPQVMLGYWNNPQET ANVMTADGFFKTGDIAILNEEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIECAVVGVKDEHSGEAVKAFVVLK DDSQDHEQMKTAILNFCREQLTAYKLPKLIEFMPQLPKSTVGKILRRELKHQA
Specific function: Catalyzes the esterification, concomitant with transport, of exogenous long-chain fatty acids into metabolically active CoA thioesters for subsequent degradation or incorporation into phospholipids [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Membrane; Peripheral membrane protein (Potential). Note=Partially membrane-associated (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=544, Percent_Identity=29.5955882352941, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI42544132, Length=504, Percent_Identity=29.1666666666667, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI38505220, Length=501, Percent_Identity=30.3393213572854, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI58082049, Length=528, Percent_Identity=27.4621212121212, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI157311624, Length=528, Percent_Identity=27.4621212121212, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI157311622, Length=528, Percent_Identity=27.4621212121212, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI115511026, Length=505, Percent_Identity=28.3168316831683, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI122937307, Length=530, Percent_Identity=28.3018867924528, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI187761345, Length=551, Percent_Identity=25.9528130671506, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI187761343, Length=551, Percent_Identity=25.9528130671506, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI57165412, Length=393, Percent_Identity=26.2086513994911, Blast_Score=115, Evalue=8e-26, Organism=Homo sapiens, GI57165410, Length=497, Percent_Identity=24.5472837022133, Blast_Score=115, Evalue=1e-25, Organism=Homo sapiens, GI40807491, Length=489, Percent_Identity=25.5623721881391, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI42794756, Length=478, Percent_Identity=23.0125523012552, Blast_Score=111, Evalue=2e-24, Organism=Homo sapiens, GI42794760, Length=478, Percent_Identity=23.0125523012552, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI42794758, Length=478, Percent_Identity=23.0125523012552, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI62865631, Length=531, Percent_Identity=24.2937853107345, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI13325055, Length=531, Percent_Identity=24.2937853107345, Blast_Score=105, Evalue=8e-23, Organism=Homo sapiens, GI4758332, Length=645, Percent_Identity=22.015503875969, Blast_Score=102, Evalue=8e-22, Organism=Homo sapiens, GI12669909, Length=645, Percent_Identity=22.015503875969, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI28416953, Length=504, Percent_Identity=24.4047619047619, Blast_Score=100, Evalue=5e-21, Organism=Homo sapiens, GI8923896, Length=566, Percent_Identity=24.0282685512367, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI253970489, Length=572, Percent_Identity=23.9510489510489, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI195947378, Length=439, Percent_Identity=23.4624145785877, Blast_Score=91, Evalue=3e-18, Organism=Homo sapiens, GI13375727, Length=513, Percent_Identity=24.3664717348928, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI27477105, Length=375, Percent_Identity=24.5333333333333, Blast_Score=78, Evalue=3e-14, Organism=Escherichia coli, GI1788107, Length=547, Percent_Identity=48.4460694698355, Blast_Score=516, Evalue=1e-147, Organism=Escherichia coli, GI145693145, Length=550, Percent_Identity=29.6363636363636, Blast_Score=214, Evalue=7e-57, Organism=Escherichia coli, GI221142682, Length=520, Percent_Identity=28.0769230769231, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI1786810, Length=509, Percent_Identity=26.5225933202358, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI1789201, Length=351, Percent_Identity=29.3447293447293, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1790505, Length=568, Percent_Identity=23.7676056338028, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1786529, Length=533, Percent_Identity=25.140712945591, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1786801, Length=472, Percent_Identity=23.5169491525424, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788595, Length=350, Percent_Identity=25.4285714285714, Blast_Score=76, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71994690, Length=524, Percent_Identity=28.4351145038168, Blast_Score=206, Evalue=3e-53, Organism=Caenorhabditis elegans, GI71994703, Length=524, Percent_Identity=28.4351145038168, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI71994694, Length=524, Percent_Identity=28.4351145038168, Blast_Score=205, Evalue=5e-53, Organism=Caenorhabditis elegans, GI17559526, Length=542, Percent_Identity=29.7047970479705, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI32563687, Length=494, Percent_Identity=27.5303643724696, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17558820, Length=499, Percent_Identity=27.2545090180361, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17560308, Length=552, Percent_Identity=27.7173913043478, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI17531443, Length=480, Percent_Identity=30, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17557194, Length=516, Percent_Identity=28.1007751937984, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17538037, Length=517, Percent_Identity=28.0464216634429, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI71985884, Length=420, Percent_Identity=28.3333333333333, Blast_Score=134, Evalue=8e-32, Organism=Caenorhabditis elegans, GI17560140, Length=372, Percent_Identity=26.0752688172043, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI71996755, Length=536, Percent_Identity=24.4402985074627, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17556552, Length=501, Percent_Identity=24.1516966067864, Blast_Score=108, Evalue=6e-24, Organism=Caenorhabditis elegans, GI17541856, Length=350, Percent_Identity=28.2857142857143, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17564090, Length=360, Percent_Identity=26.9444444444444, Blast_Score=104, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17510401, Length=481, Percent_Identity=23.7006237006237, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25147511, Length=423, Percent_Identity=25.531914893617, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI71983001, Length=567, Percent_Identity=24.6913580246914, Blast_Score=85, Evalue=8e-17, Organism=Caenorhabditis elegans, GI71982997, Length=567, Percent_Identity=24.6913580246914, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI115534440, Length=532, Percent_Identity=21.9924812030075, Blast_Score=82, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17507435, Length=504, Percent_Identity=23.2142857142857, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI25141359, Length=350, Percent_Identity=24.8571428571429, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193204819, Length=145, Percent_Identity=35.1724137931034, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17551278, Length=514, Percent_Identity=24.124513618677, Blast_Score=70, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319699, Length=483, Percent_Identity=28.5714285714286, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6324893, Length=472, Percent_Identity=25.4237288135593, Blast_Score=104, Evalue=3e-23, Organism=Saccharomyces cerevisiae, GI6319264, Length=513, Percent_Identity=25.5360623781676, Blast_Score=100, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6323903, Length=444, Percent_Identity=25.6756756756757, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6323182, Length=540, Percent_Identity=24.0740740740741, Blast_Score=97, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6320852, Length=339, Percent_Identity=26.5486725663717, Blast_Score=94, Evalue=6e-20, Organism=Saccharomyces cerevisiae, GI6322182, Length=412, Percent_Identity=23.0582524271845, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI18859661, Length=534, Percent_Identity=32.0224719101124, Blast_Score=239, Evalue=5e-63, Organism=Drosophila melanogaster, GI24581924, Length=541, Percent_Identity=27.3567467652495, Blast_Score=192, Evalue=7e-49, Organism=Drosophila melanogaster, GI21355181, Length=520, Percent_Identity=26.7307692307692, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24648260, Length=478, Percent_Identity=25.7322175732218, Blast_Score=139, Evalue=5e-33, Organism=Drosophila melanogaster, GI24653035, Length=504, Percent_Identity=25.7936507936508, Blast_Score=129, Evalue=7e-30, Organism=Drosophila melanogaster, GI21358303, Length=471, Percent_Identity=23.5668789808917, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI21356441, Length=447, Percent_Identity=23.2662192393736, Blast_Score=121, Evalue=9e-28, Organism=Drosophila melanogaster, GI161076582, Length=513, Percent_Identity=25.7309941520468, Blast_Score=121, Evalue=1e-27, Organism=Drosophila melanogaster, GI281366413, Length=498, Percent_Identity=24.8995983935743, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24666501, Length=498, Percent_Identity=24.8995983935743, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI24666497, Length=498, Percent_Identity=24.8995983935743, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI281365686, Length=238, Percent_Identity=26.890756302521, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI24648257, Length=359, Percent_Identity=26.7409470752089, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI19922652, Length=488, Percent_Identity=23.7704918032787, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24667955, Length=565, Percent_Identity=24.070796460177, Blast_Score=114, Evalue=1e-25, Organism=Drosophila melanogaster, GI21356947, Length=469, Percent_Identity=22.3880597014925, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI62472339, Length=524, Percent_Identity=24.0458015267176, Blast_Score=113, Evalue=4e-25, Organism=Drosophila melanogaster, GI24656500, Length=527, Percent_Identity=23.9089184060721, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI24648253, Length=443, Percent_Identity=21.8961625282167, Blast_Score=107, Evalue=3e-23, Organism=Drosophila melanogaster, GI24648255, Length=443, Percent_Identity=21.8961625282167, Blast_Score=106, Evalue=5e-23, Organism=Drosophila melanogaster, GI62471679, Length=487, Percent_Identity=24.6406570841889, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI62471683, Length=487, Percent_Identity=24.6406570841889, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI62471685, Length=487, Percent_Identity=24.6406570841889, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24586636, Length=487, Percent_Identity=24.6406570841889, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI62471681, Length=487, Percent_Identity=24.6406570841889, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI62471687, Length=487, Percent_Identity=24.6406570841889, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24586634, Length=487, Percent_Identity=24.6406570841889, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI22026970, Length=487, Percent_Identity=24.6406570841889, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI62471689, Length=487, Percent_Identity=24.6406570841889, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24667959, Length=473, Percent_Identity=25.1585623678647, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI20130357, Length=357, Percent_Identity=24.3697478991597, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI19921316, Length=463, Percent_Identity=24.1900647948164, Blast_Score=97, Evalue=3e-20, Organism=Drosophila melanogaster, GI17933690, Length=350, Percent_Identity=25.1428571428571, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI21355225, Length=504, Percent_Identity=21.8253968253968, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI221329755, Length=251, Percent_Identity=27.4900398406374, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI281364798, Length=563, Percent_Identity=23.2682060390764, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI24583465, Length=563, Percent_Identity=23.2682060390764, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI24583463, Length=563, Percent_Identity=23.2682060390764, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI45552801, Length=555, Percent_Identity=22.3423423423423, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI45550496, Length=555, Percent_Identity=22.3423423423423, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.3 [H]
Molecular weight: Translated: 58181; Mature: 58050
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYDQESQLELGKYSSLIDLIERTSQRFGDKTAYACLGKTSSFNDIERDSRYFAAYLQNN CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCHHHHHHHHEEEEECCC TNLKPGDRIAIQLPNITQFVIAAYGALRAGLILVNTNPLYTERELIHQFNDSGAKALVVL CCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHH SDLLPTLAKVVATTPIELVISTHPLDLIDPQVQPKTGLKNVEFCQVLKQGAELPFSRFVP HHHHHHHHHHHHCCCEEEEEECCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCC AANDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVITEGEDIFVAPLPIYHIY CCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHH AFMVNLVLYFECGGCSVLIPNPRDISGLIKTLAKYPFTGFAGLNTLFVALCHQPEFKALD HHHHHHHEEEECCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEC FSHLKITISGGTALTAAAANIWQQTTGNTISEGYGLSETSPVISLNAPGYQKIGTIGKPV EEEEEEEECCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEECCCCCHHHCCCCCCC LGTEVKLLDENGNEVAQGEAGELAARGPQVMLGYWNNPQETANVMTADGFFKTGDIAILN CCCEEEEEECCCCEECCCCCCCHHHCCCEEEEEECCCCHHHHCEEEECCCEECCCEEEEC EEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIECAVVGVKDEHSGEAVKAFVVL CCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEE KDDSQDHEQMKTAILNFCREQLTAYKLPKLIEFMPQLPKSTVGKILRRELKHQA ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure AYDQESQLELGKYSSLIDLIERTSQRFGDKTAYACLGKTSSFNDIERDSRYFAAYLQNN CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEECCCCCCCHHHHHHHHEEEEECCC TNLKPGDRIAIQLPNITQFVIAAYGALRAGLILVNTNPLYTERELIHQFNDSGAKALVVL CCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHCCCCCCHHHHH SDLLPTLAKVVATTPIELVISTHPLDLIDPQVQPKTGLKNVEFCQVLKQGAELPFSRFVP HHHHHHHHHHHHCCCEEEEEECCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHCCC AANDLAALQYTGGTTGLSKGAMLTHGNMLANAAQVKSRIGSVITEGEDIFVAPLPIYHIY CCCCCEEEEECCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHH AFMVNLVLYFECGGCSVLIPNPRDISGLIKTLAKYPFTGFAGLNTLFVALCHQPEFKALD HHHHHHHEEEECCCEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEC FSHLKITISGGTALTAAAANIWQQTTGNTISEGYGLSETSPVISLNAPGYQKIGTIGKPV EEEEEEEECCCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCEEEECCCCCHHHCCCCCCC LGTEVKLLDENGNEVAQGEAGELAARGPQVMLGYWNNPQETANVMTADGFFKTGDIAILN CCCEEEEEECCCCEECCCCCCCHHHCCCEEEEEECCCCHHHHCEEEECCCEECCCEEEEC EEGFHQIVDRKKDMIIVSGFNVYPNEVENVLASHPNIIECAVVGVKDEHSGEAVKAFVVL CCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEEE KDDSQDHEQMKTAILNFCREQLTAYKLPKLIEFMPQLPKSTVGKILRRELKHQA ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]