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The map label for this gene is hxuC [H]

Identifier: 117921673

GI number: 117921673

Start: 3879310

End: 3881397

Strand: Reverse

Name: hxuC [H]

Synonym: Shewana3_3235

Alternate gene names: 117921673

Gene position: 3881397-3879310 (Counterclockwise)

Preceding gene: 117921681

Following gene: 117921672

Centisome position: 78.06

GC content: 48.66

Gene sequence:

>2088_bases
ATGCAAAAAAAGCCGTTAGTTATCGCCATTGCGATCGCATTAACGACTACGGCGCTAAGCTTCACGTTAGCGGCTGAAGA
AGGTGTGACTGCGCAGCAAAAGGAAAAGAAACCGGAATTAGTCGAGACTGAGTTTGATGAAGTATTAGTCAGCGCGACAC
GCTTGAGTGAAAAAGTCTCCCAGACGAGCCGCAGTGTTGCCGTTGTGAGTGAAGAACAGCTCAATGTGGCTCAGGCATCA
TCGGTTGCCGAAGCGCTAAAAAATGAAGCCAACATCACTTTAACCAATGGTCCGAGAGCGACGTCTCAAGGGGTTGAGAT
CCGTGGTTTAAGCGGCGATCGTGTATTACAAACCATTGATGGTGCAAGACAGAATACCAGTTCTGGTCACCGTGGTTCTT
ACTTTATGGATCCAGAATTACTCAAATCAATTGAGGTGATTCGCGGTCCTGCCAGTAGTCTCTGGGGCAGTGGTGCTATC
GGTGGTGTGGTGGCGCAGAATACTAAATCGGCTCAAGATTTCTTAGCCCCTAACGAAACCTTCGGTGGCTATCTAAAGCA
AGGCTATGACACTAATGGCGACCGCACTAAAACCAGCGCTGCCGTGTATGGCCAACAAGATACTATTGATTGGTTAATCA
ATGGATCTTACTTTGACTCCAATAATATCAATACGGGGAATGACGAAACCTTAACGAACAGTGCTTCTTTGGGGAGCAGT
GGTTTGGCTAAGTTTGGATGGCAAGCCGATGAGGCTTCACGCTTAGAGTTATCGGCAAGAGTTAACAAGATTAATGAACT
CGTGCCGAGTAATCCTTCCGCTGCGGTGAGCAGTTCAGTGCCTTTAGTGCGCCGCAAAACGGACGATCAAAACGTTACCC
TTAATTACAGCTTGGCGCCGGCAAATAATCCATATTTGGACACTAAAGTGCAGGTCTATTGGAATAGCACGGATTATGAC
GAAGACCGAGTGACAAAAGGTCAATTTGATAGCACCGAATACCGCACCATTGGCATCAATCTCAACAACAGTTCGCAGTT
AGGGAACACTAAGCTGACCTATGGTGTCGATGGTTATCGCGATACCCTTAAAACCGTTAGAGACGATAGGGGCCAAGTGG
GGCAGCGCCCAGGGGATATCGATGGTGAGACCACAGTGTGGGGCGCCTTTACCCGTGCCGATATTCAATTGACGCAAACC
GTCAATCTTGACGCCGCCTTACGTTATGACAGCTTCAAAAACGAGAGTCACAACCTTAATGCTTCTGCGGATGACAATGA
GTTATCGCCTTCGCTGGGCTTAAGTTGGCAGACTCAGCCGTGGCTGACTTTAAGTGCACGGTATGATCAGGCTTTCCGTG
CGCCAACGGTTGAGGAAATGTTTTCTACCGGAACCCATTATTGCATTCCGCCGATCCCCGGATTTTTACCCCAAGGTCTG
TGTAATACCTTTGCGACGAATCCTAACTTAAAGTCTGAAGTCGCCCGCAATAAAGAACTGAAAGCCGATTTTCGTTTCAA
CAACTTAGCCGGTGATGATGAGCTGGCTTTCACCGTAAACATCTTCCGTAACGACGTGGACGATTTTATCGTTCAGCAAG
TCTCCAATCCGTTAATGGGGATCCCAGGATTTGAGCAAACCACCTCATGGAATAACGTGGAAGATGCGCAATTAACTGGC
TTTGAGCTCAGCGGCCGTTATCGCATTGGGCAAACACGGCTGGCGATGAATTACGGTCAGACCCGCGGTGAAGACCGTAA
GACTGGCGACTATATCGAAGGTATGCCCGCCAATAAGTTTAACGTCGATCTCTCCCAAGGCATCATGGAAGGCGATATGA
AACTCGGCACTCGAGTGACCTATGTCGCCAGCCAATCCAATACGCCCGAAGGTTATCGCGTGGCTAAGTATGACGACTAT
ACCCTGTGGGATGTGTACCTCGCCTGGGAGCCAGCGATGGGGGCTATGTCTGGCCTGAGAGTCGACTTTGCCATCGAAAA
CATTGGTGATGAGAAATACCAGCAGGCATGGCAGACCCTATATCAATCTGGTCGCAATATGAAGTTGTCAGCACGTTATA
TGTTCTAG

Upstream 100 bases:

>100_bases
CTCAAAAATGCAGCAGCTCGACCTAGGTTGACGGACTAACCATAAATGGTCGATTTGAATTCTAATCGATTAATATCATT
GATGATTTAAGGATGTAACC

Downstream 100 bases:

>100_bases
GCCCAGCTTTAGGAGATGCAAATGACACAGACAATCGACACTGAAATTACACTCCCGAGCCATCACACTGATGCCGACTC
GCAGTCCATGTTAAGGCAGC

Product: TonB-dependent heme/hemoglobin receptor family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 695; Mature: 695

Protein sequence:

>695_residues
MQKKPLVIAIAIALTTTALSFTLAAEEGVTAQQKEKKPELVETEFDEVLVSATRLSEKVSQTSRSVAVVSEEQLNVAQAS
SVAEALKNEANITLTNGPRATSQGVEIRGLSGDRVLQTIDGARQNTSSGHRGSYFMDPELLKSIEVIRGPASSLWGSGAI
GGVVAQNTKSAQDFLAPNETFGGYLKQGYDTNGDRTKTSAAVYGQQDTIDWLINGSYFDSNNINTGNDETLTNSASLGSS
GLAKFGWQADEASRLELSARVNKINELVPSNPSAAVSSSVPLVRRKTDDQNVTLNYSLAPANNPYLDTKVQVYWNSTDYD
EDRVTKGQFDSTEYRTIGINLNNSSQLGNTKLTYGVDGYRDTLKTVRDDRGQVGQRPGDIDGETTVWGAFTRADIQLTQT
VNLDAALRYDSFKNESHNLNASADDNELSPSLGLSWQTQPWLTLSARYDQAFRAPTVEEMFSTGTHYCIPPIPGFLPQGL
CNTFATNPNLKSEVARNKELKADFRFNNLAGDDELAFTVNIFRNDVDDFIVQQVSNPLMGIPGFEQTTSWNNVEDAQLTG
FELSGRYRIGQTRLAMNYGQTRGEDRKTGDYIEGMPANKFNVDLSQGIMEGDMKLGTRVTYVASQSNTPEGYRVAKYDDY
TLWDVYLAWEPAMGAMSGLRVDFAIENIGDEKYQQAWQTLYQSGRNMKLSARYMF

Sequences:

>Translated_695_residues
MQKKPLVIAIAIALTTTALSFTLAAEEGVTAQQKEKKPELVETEFDEVLVSATRLSEKVSQTSRSVAVVSEEQLNVAQAS
SVAEALKNEANITLTNGPRATSQGVEIRGLSGDRVLQTIDGARQNTSSGHRGSYFMDPELLKSIEVIRGPASSLWGSGAI
GGVVAQNTKSAQDFLAPNETFGGYLKQGYDTNGDRTKTSAAVYGQQDTIDWLINGSYFDSNNINTGNDETLTNSASLGSS
GLAKFGWQADEASRLELSARVNKINELVPSNPSAAVSSSVPLVRRKTDDQNVTLNYSLAPANNPYLDTKVQVYWNSTDYD
EDRVTKGQFDSTEYRTIGINLNNSSQLGNTKLTYGVDGYRDTLKTVRDDRGQVGQRPGDIDGETTVWGAFTRADIQLTQT
VNLDAALRYDSFKNESHNLNASADDNELSPSLGLSWQTQPWLTLSARYDQAFRAPTVEEMFSTGTHYCIPPIPGFLPQGL
CNTFATNPNLKSEVARNKELKADFRFNNLAGDDELAFTVNIFRNDVDDFIVQQVSNPLMGIPGFEQTTSWNNVEDAQLTG
FELSGRYRIGQTRLAMNYGQTRGEDRKTGDYIEGMPANKFNVDLSQGIMEGDMKLGTRVTYVASQSNTPEGYRVAKYDDY
TLWDVYLAWEPAMGAMSGLRVDFAIENIGDEKYQQAWQTLYQSGRNMKLSARYMF
>Mature_695_residues
MQKKPLVIAIAIALTTTALSFTLAAEEGVTAQQKEKKPELVETEFDEVLVSATRLSEKVSQTSRSVAVVSEEQLNVAQAS
SVAEALKNEANITLTNGPRATSQGVEIRGLSGDRVLQTIDGARQNTSSGHRGSYFMDPELLKSIEVIRGPASSLWGSGAI
GGVVAQNTKSAQDFLAPNETFGGYLKQGYDTNGDRTKTSAAVYGQQDTIDWLINGSYFDSNNINTGNDETLTNSASLGSS
GLAKFGWQADEASRLELSARVNKINELVPSNPSAAVSSSVPLVRRKTDDQNVTLNYSLAPANNPYLDTKVQVYWNSTDYD
EDRVTKGQFDSTEYRTIGINLNNSSQLGNTKLTYGVDGYRDTLKTVRDDRGQVGQRPGDIDGETTVWGAFTRADIQLTQT
VNLDAALRYDSFKNESHNLNASADDNELSPSLGLSWQTQPWLTLSARYDQAFRAPTVEEMFSTGTHYCIPPIPGFLPQGL
CNTFATNPNLKSEVARNKELKADFRFNNLAGDDELAFTVNIFRNDVDDFIVQQVSNPLMGIPGFEQTTSWNNVEDAQLTG
FELSGRYRIGQTRLAMNYGQTRGEDRKTGDYIEGMPANKFNVDLSQGIMEGDMKLGTRVTYVASQSNTPEGYRVAKYDDY
TLWDVYLAWEPAMGAMSGLRVDFAIENIGDEKYQQAWQTLYQSGRNMKLSARYMF

Specific function: Required for utilization of free heme at low concentrations [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=134, Percent_Identity=32.089552238806, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1790405, Length=166, Percent_Identity=30.1204819277108, Blast_Score=63, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR011276
- InterPro:   IPR010949
- InterPro:   IPR010917 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 76530; Mature: 76530

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKPLVIAIAIALTTTALSFTLAAEEGVTAQQKEKKPELVETEFDEVLVSATRLSEKVS
CCCCCEEEEEEEHHHHHHHEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QTSRSVAVVSEEQLNVAQASSVAEALKNEANITLTNGPRATSQGVEIRGLSGDRVLQTID
HHCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCHHHHHHH
GARQNTSSGHRGSYFMDPELLKSIEVIRGPASSLWGSGAIGGVVAQNTKSAQDFLAPNET
CCCCCCCCCCCCCEEECHHHHHHHHHHCCCHHHHCCCCCCCCEEECCCCCHHHHCCCCCH
FGGYLKQGYDTNGDRTKTSAAVYGQQDTIDWLINGSYFDSNNINTGNDETLTNSASLGSS
HCHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECEEECCCCCCCCCCCCCCCCCCCCCC
GLAKFGWQADEASRLELSARVNKINELVPSNPSAAVSSSVPLVRRKTDDQNVTLNYSLAP
CHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEECCCCCEEEEEEEECC
ANNPYLDTKVQVYWNSTDYDEDRVTKGQFDSTEYRTIGINLNNSSQLGNTKLTYGVDGYR
CCCCCCCCEEEEEECCCCCCHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCHHH
DTLKTVRDDRGQVGQRPGDIDGETTVWGAFTRADIQLTQTVNLDAALRYDSFKNESHNLN
HHHHHHHHCCHHCCCCCCCCCCCEEEEEEEEECCEEEEEEECCCEEEECCCCCCCCCCCC
ASADDNELSPSLGLSWQTQPWLTLSARYDQAFRAPTVEEMFSTGTHYCIPPIPGFLPQGL
CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCHHHHHHCCCCEECCCCCCCCHHHH
CNTFATNPNLKSEVARNKELKADFRFNNLAGDDELAFTVNIFRNDVDDFIVQQVSNPLMG
HHHHCCCCCHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEHHCCHHHHHHHHHCCCCCC
IPGFEQTTSWNNVEDAQLTGFELSGRYRIGQTRLAMNYGQTRGEDRKTGDYIEGMPANKF
CCCCCCCCCCCCCCCCEEEEEEECCEEEECCEEEEECCCCCCCCCCCCCCHHCCCCCCCE
NVDLSQGIMEGDMKLGTRVTYVASQSNTPEGYRVAKYDDYTLWDVYLAWEPAMGAMSGLR
ECCHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEEEEEECCCHHHHHCCE
VDFAIENIGDEKYQQAWQTLYQSGRNMKLSARYMF
EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECC
>Mature Secondary Structure
MQKKPLVIAIAIALTTTALSFTLAAEEGVTAQQKEKKPELVETEFDEVLVSATRLSEKVS
CCCCCEEEEEEEHHHHHHHEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QTSRSVAVVSEEQLNVAQASSVAEALKNEANITLTNGPRATSQGVEIRGLSGDRVLQTID
HHCCEEEEEEHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEECCCCHHHHHHH
GARQNTSSGHRGSYFMDPELLKSIEVIRGPASSLWGSGAIGGVVAQNTKSAQDFLAPNET
CCCCCCCCCCCCCEEECHHHHHHHHHHCCCHHHHCCCCCCCCEEECCCCCHHHHCCCCCH
FGGYLKQGYDTNGDRTKTSAAVYGQQDTIDWLINGSYFDSNNINTGNDETLTNSASLGSS
HCHHHHCCCCCCCCCCCCEEEEECCCCCEEEEEECEEECCCCCCCCCCCCCCCCCCCCCC
GLAKFGWQADEASRLELSARVNKINELVPSNPSAAVSSSVPLVRRKTDDQNVTLNYSLAP
CHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCEEEECCCCCEEEEEEEECC
ANNPYLDTKVQVYWNSTDYDEDRVTKGQFDSTEYRTIGINLNNSSQLGNTKLTYGVDGYR
CCCCCCCCEEEEEECCCCCCHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCHHH
DTLKTVRDDRGQVGQRPGDIDGETTVWGAFTRADIQLTQTVNLDAALRYDSFKNESHNLN
HHHHHHHHCCHHCCCCCCCCCCCEEEEEEEEECCEEEEEEECCCEEEECCCCCCCCCCCC
ASADDNELSPSLGLSWQTQPWLTLSARYDQAFRAPTVEEMFSTGTHYCIPPIPGFLPQGL
CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCHHHHHHCCCCEECCCCCCCCHHHH
CNTFATNPNLKSEVARNKELKADFRFNNLAGDDELAFTVNIFRNDVDDFIVQQVSNPLMG
HHHHCCCCCHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEEHHCCHHHHHHHHHCCCCCC
IPGFEQTTSWNNVEDAQLTGFELSGRYRIGQTRLAMNYGQTRGEDRKTGDYIEGMPANKF
CCCCCCCCCCCCCCCCEEEEEEECCEEEECCEEEEECCCCCCCCCCCCCCHHCCCCCCCE
NVDLSQGIMEGDMKLGTRVTYVASQSNTPEGYRVAKYDDYTLWDVYLAWEPAMGAMSGLR
ECCHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCEEEEEEEEEECCCHHHHHCCE
VDFAIENIGDEKYQQAWQTLYQSGRNMKLSARYMF
EEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751272 [H]