| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921672
Identifier: 117921672
GI number: 117921672
Start: 3878722
End: 3879288
Strand: Reverse
Name: 117921672
Synonym: Shewana3_3234
Alternate gene names: NA
Gene position: 3879288-3878722 (Counterclockwise)
Preceding gene: 117921673
Following gene: 117921671
Centisome position: 78.02
GC content: 48.85
Gene sequence:
>567_bases ATGACACAGACAATCGACACTGAAATTACACTCCCGAGCCATCACACTGATGCCGACTCGCAGTCCATGTTAAGGCAGCG CTTTGTCAGACAGCCCGATTTAATGCCTGCACAGTTGGCGAGTGAATTAGGGATTGCCGAGCTTGATGTGGTCGCGGCAC TGCCGCAAGCGCAGCGGGTGTTTTTGTCTTTAACGCAAATCGATGAGCTGCTGCAGAGCTTACCCGAGTGGGGACCTCTG ACCACGATAGTGATGCTCTCGGGCAGCGTTTTTGAATTTAAAGGTGATTTTCCCCAAGGGAAATTTGCCCATGGATATTA CAACCTCTACAGCAAAGGCGATGGCCTTCATGGTCATCTCAAGCTGGATAACATGCGAGCGATTGCGTTAATCAGCAGAC CCTTTAGGGGCAGTGAGAGCCATTCGATTAACTTTTTTGGTCCTCAAGGCGAGGTGGTATTCAAAGTTTATTTAGGACGA GACAAGCAAAGAGTGCTTTTTCCTGAGCAAGTTAGCCGTTTTAAAACGCTGGCGAGCACCTTTGCTACTCAACAGTCACC GATATAA
Upstream 100 bases:
>100_bases TGAGAAATACCAGCAGGCATGGCAGACCCTATATCAATCTGGTCGCAATATGAAGTTGTCAGCACGTTATATGTTCTAGG CCCAGCTTTAGGAGATGCAA
Downstream 100 bases:
>100_bases TTTATTAAGGTATCCAATATGAAGCCTGAAATCTCCGAGCAAGAACAACGTTTAAGGGACAAACTGTTACCCGAAATTGA GGCCTTTAAACAGCAGCGCC
Product: heme utilization protein HuvX
Products: NA
Alternate protein names: Heme Utilization Protein HuvX; Heme Iron Utilization Protein; Coproporphyrinogen III Oxidase; HutX Protein; Heme Utilization Protein HugX; Oxygen-Independent Coproporphyrinogen III Oxidase; HugX Protein; Heme Uptake And Utilization Protein HuvX; Oxygen Independent Coproporphyrinogen III Oxidase; Coproporphyrinogen Dehydrogenase
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTQTIDTEITLPSHHTDADSQSMLRQRFVRQPDLMPAQLASELGIAELDVVAALPQAQRVFLSLTQIDELLQSLPEWGPL TTIVMLSGSVFEFKGDFPQGKFAHGYYNLYSKGDGLHGHLKLDNMRAIALISRPFRGSESHSINFFGPQGEVVFKVYLGR DKQRVLFPEQVSRFKTLASTFATQQSPI
Sequences:
>Translated_188_residues MTQTIDTEITLPSHHTDADSQSMLRQRFVRQPDLMPAQLASELGIAELDVVAALPQAQRVFLSLTQIDELLQSLPEWGPL TTIVMLSGSVFEFKGDFPQGKFAHGYYNLYSKGDGLHGHLKLDNMRAIALISRPFRGSESHSINFFGPQGEVVFKVYLGR DKQRVLFPEQVSRFKTLASTFATQQSPI >Mature_187_residues TQTIDTEITLPSHHTDADSQSMLRQRFVRQPDLMPAQLASELGIAELDVVAALPQAQRVFLSLTQIDELLQSLPEWGPLT TIVMLSGSVFEFKGDFPQGKFAHGYYNLYSKGDGLHGHLKLDNMRAIALISRPFRGSESHSINFFGPQGEVVFKVYLGRD KQRVLFPEQVSRFKTLASTFATQQSPI
Specific function: Unknown
COG id: COG3721
COG function: function code P; Putative heme iron utilization protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21052; Mature: 20921
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTIDTEITLPSHHTDADSQSMLRQRFVRQPDLMPAQLASELGIAELDVVAALPQAQRV CCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCHHHHH FLSLTQIDELLQSLPEWGPLTTIVMLSGSVFEFKGDFPQGKFAHGYYNLYSKGDGLHGHL HHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCEEEEECCCCCCEEEE KLDNMRAIALISRPFRGSESHSINFFGPQGEVVFKVYLGRDKQRVLFPEQVSRFKTLAST EECCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEECHHHHHHHHHHHHH FATQQSPI HHHCCCCC >Mature Secondary Structure TQTIDTEITLPSHHTDADSQSMLRQRFVRQPDLMPAQLASELGIAELDVVAALPQAQRV CCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHCCHHHHH FLSLTQIDELLQSLPEWGPLTTIVMLSGSVFEFKGDFPQGKFAHGYYNLYSKGDGLHGHL HHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCEEEEECCCCCCEEEE KLDNMRAIALISRPFRGSESHSINFFGPQGEVVFKVYLGRDKQRVLFPEQVSRFKTLAST EECCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEECHHHHHHHHHHHHH FATQQSPI HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA