Click here to switch to the map view.

The map label for this gene is 117921671

Identifier: 117921671

GI number: 117921671

Start: 3878146

End: 3878703

Strand: Reverse

Name: 117921671

Synonym: Shewana3_3233

Alternate gene names: NA

Gene position: 3878703-3878146 (Counterclockwise)

Preceding gene: 117921672

Following gene: 117921670

Centisome position: 78.01

GC content: 49.46

Gene sequence:

>558_bases
ATGAAGCCTGAAATCTCCGAGCAAGAACAACGTTTAAGGGACAAACTGTTACCCGAAATTGAGGCCTTTAAACAGCAGCG
CCATACTTTGCAACTCGCAACAGTCGATACGGATGGGCAACCCAATGCCAGTTATGCGCCATTTGCCTTAGCCGACGATG
GGTTTTACATCTTAGTGAGTGACTTAGCGCGTCACGGCCACAACCTTAAGCAGTCGACCAAAGTGTCTGTGATGCTGGTG
GAGGATGAAGCCGAAGCTAAGTCTGTATTCGCCCGTAAACGCCTCACTTTCGATGCTCTGGCTCAAGCGGTTGAGCGGGA
TACGCCCTCGTTTAGTAAGGGAGTCAGCCTGTTATCAAAACGCTTTGGCGACATGTCCGATAATCTCGCGGCACTGACGG
ACTTTAATCTGTATAAGTTAGCGCCCCATCAGGGATTGTATGTGAAAGGTTTTGGTCAAGCCTTTAGTTTGACGGGCAGT
GAATTACTCGATGTTAACTGGAAGCGAGATGGCCACCATGGCACACCTAAAGCGCCCGAAGATATGCGAGTAGCTTAA

Upstream 100 bases:

>100_bases
GCAAAGAGTGCTTTTTCCTGAGCAAGTTAGCCGTTTTAAAACGCTGGCGAGCACCTTTGCTACTCAACAGTCACCGATAT
AATTTATTAAGGTATCCAAT

Downstream 100 bases:

>100_bases
GTACTACTTGTAGCGTAAACACTGTGTCTTGAAGACTTATGTTTTGAAAATCTGCGCCTTGAGCTTGATCGACTCAAGGC
GCAAGCATAAACCCGCTCTC

Product: pyridoxamine 5'-phosphate oxidase-related, FMN-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKPEISEQEQRLRDKLLPEIEAFKQQRHTLQLATVDTDGQPNASYAPFALADDGFYILVSDLARHGHNLKQSTKVSVMLV
EDEAEAKSVFARKRLTFDALAQAVERDTPSFSKGVSLLSKRFGDMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLTGS
ELLDVNWKRDGHHGTPKAPEDMRVA

Sequences:

>Translated_185_residues
MKPEISEQEQRLRDKLLPEIEAFKQQRHTLQLATVDTDGQPNASYAPFALADDGFYILVSDLARHGHNLKQSTKVSVMLV
EDEAEAKSVFARKRLTFDALAQAVERDTPSFSKGVSLLSKRFGDMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLTGS
ELLDVNWKRDGHHGTPKAPEDMRVA
>Mature_185_residues
MKPEISEQEQRLRDKLLPEIEAFKQQRHTLQLATVDTDGQPNASYAPFALADDGFYILVSDLARHGHNLKQSTKVSVMLV
EDEAEAKSVFARKRLTFDALAQAVERDTPSFSKGVSLLSKRFGDMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLTGS
ELLDVNWKRDGHHGTPKAPEDMRVA

Specific function: Unknown

COG id: COG0748

COG function: function code P; Putative heme iron utilization protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019595
- InterPro:   IPR011576
- InterPro:   IPR012349
- InterPro:   IPR009002
- InterPro:   IPR014419 [H]

Pfam domain/function: PF10615 DUF2470; PF01243 Pyridox_oxidase [H]

EC number: NA

Molecular weight: Translated: 20619; Mature: 20619

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPEISEQEQRLRDKLLPEIEAFKQQRHTLQLATVDTDGQPNASYAPFALADDGFYILVS
CCCCCCHHHHHHHHHHCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCEEEECCCCEEEHH
DLARHGHNLKQSTKVSVMLVEDEAEAKSVFARKRLTFDALAQAVERDTPSFSKGVSLLSK
HHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHH
RFGDMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLTGSELLDVNWKRDGHHGTPKAPE
HCCCCCCCEEEHCCCCEEEECCCCCEEEEECCCEEECCCCEEEEECCCCCCCCCCCCCCC
DMRVA
CCCCC
>Mature Secondary Structure
MKPEISEQEQRLRDKLLPEIEAFKQQRHTLQLATVDTDGQPNASYAPFALADDGFYILVS
CCCCCCHHHHHHHHHHCHHHHHHHHHHHEEEEEEECCCCCCCCCCCCEEEECCCCEEEHH
DLARHGHNLKQSTKVSVMLVEDEAEAKSVFARKRLTFDALAQAVERDTPSFSKGVSLLSK
HHHHCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHH
RFGDMSDNLAALTDFNLYKLAPHQGLYVKGFGQAFSLTGSELLDVNWKRDGHHGTPKAPE
HCCCCCCCEEEHCCCCEEEECCCCCEEEEECCCEEECCCCEEEEECCCCCCCCCCCCCCC
DMRVA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]