| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921664
Identifier: 117921664
GI number: 117921664
Start: 3868548
End: 3869093
Strand: Direct
Name: 117921664
Synonym: Shewana3_3226
Alternate gene names: NA
Gene position: 3868548-3869093 (Clockwise)
Preceding gene: 117921661
Following gene: 117921665
Centisome position: 77.8
GC content: 48.9
Gene sequence:
>546_bases ATGGGCACTATCACTCTTATCAGTCTGGTCATTCTCGCATTACTCGTGGGCGCGATTAGCCTGCTAATCTGGCAACGCAG CAAAGGTAAGCGCATTCCACTCGCGGTAATTTTTGTATTGGGATTTTTCGCCGTAGGCCTAGGCGGAATTATCGGTTTTG TACATAAAGGTGAAGATTATCAAGCCTATCAAAAGCTGCAGTGGCATACGCTTGCCCCTGAAAAAATCGCACCGCTGGTC GCCGATGGCTACACAGTGTTTGTGGATATCACCTCAGACTGGTGCAGCATTTGCCAAACCAACAAGGCTGAAGTCACCCA CAGAGAGCAAGTGGTGAATGCGCTGATGGCCGACAAGGTTATTTTGATGCAGGGAAATTGGAGCGAAGCCGATTCCACCA TTGCGGGTTATATGAAGCATGAAGGCGTACCTGGTACACCTTACAATAAGGTCTATGGTCCAAGGGCGCCTAACGGCATA GTGCTGCCTTCAACGCTCACCATAGAAGCTGTACTTAATGGCTTAGCTCAGGCAAAAGCACTGTAA
Upstream 100 bases:
>100_bases GCGTCAAAGCTTTAATCGGCTTTTAAAGCATAAATTCACGCAGATTTAAGCTGTTAGCCGCTAAGATAGATTGGATTATC GGAAACTCATGTAGGCATCT
Downstream 100 bases:
>100_bases GCAATTGATTTTGATTAAACTTCAAAAACAAAGCTTTAAGATTAAAACACTCGCGCAATAAAAAAGGCTGCATCGCAGCC TTTTTGCACACTTCAAATCA
Product: thiol:disulfide interchange protein
Products: NA
Alternate protein names: ThiolDisulfide Interchange Protein; Cytochrome C Biogenesis Protein Transmembrane Region; ThiolDisulfide Interchange Protein DsbD; Metal Resistance Protein; ThiolDisulfide Interchange; C-Type Cytochrome Biogenesis Protein; Copper-Sensitivity B Suppressor; ThiODisulfide Interchange Protein; Cytochrome C Biogenesis Transmembrane Protein; Protein-Disulfide Reductase; Copper-Sensitivity Suppressor B Protein; Copper Sensitivity Suppressor Membrane Protein B
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MGTITLISLVILALLVGAISLLIWQRSKGKRIPLAVIFVLGFFAVGLGGIIGFVHKGEDYQAYQKLQWHTLAPEKIAPLV ADGYTVFVDITSDWCSICQTNKAEVTHREQVVNALMADKVILMQGNWSEADSTIAGYMKHEGVPGTPYNKVYGPRAPNGI VLPSTLTIEAVLNGLAQAKAL
Sequences:
>Translated_181_residues MGTITLISLVILALLVGAISLLIWQRSKGKRIPLAVIFVLGFFAVGLGGIIGFVHKGEDYQAYQKLQWHTLAPEKIAPLV ADGYTVFVDITSDWCSICQTNKAEVTHREQVVNALMADKVILMQGNWSEADSTIAGYMKHEGVPGTPYNKVYGPRAPNGI VLPSTLTIEAVLNGLAQAKAL >Mature_180_residues GTITLISLVILALLVGAISLLIWQRSKGKRIPLAVIFVLGFFAVGLGGIIGFVHKGEDYQAYQKLQWHTLAPEKIAPLVA DGYTVFVDITSDWCSICQTNKAEVTHREQVVNALMADKVILMQGNWSEADSTIAGYMKHEGVPGTPYNKVYGPRAPNGIV LPSTLTIEAVLNGLAQAKAL
Specific function: Unknown
COG id: COG4232
COG function: function code OC; Thiol:disulfide interchange protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19562; Mature: 19431
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTITLISLVILALLVGAISLLIWQRSKGKRIPLAVIFVLGFFAVGLGGIIGFVHKGEDY CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH QAYQKLQWHTLAPEKIAPLVADGYTVFVDITSDWCSICQTNKAEVTHREQVVNALMADKV HHHHHHHHCCCCHHHHHHHEECCEEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHCCE ILMQGNWSEADSTIAGYMKHEGVPGTPYNKVYGPRAPNGIVLPSTLTIEAVLNGLAQAKA EEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCC L C >Mature Secondary Structure GTITLISLVILALLVGAISLLIWQRSKGKRIPLAVIFVLGFFAVGLGGIIGFVHKGEDY CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCH QAYQKLQWHTLAPEKIAPLVADGYTVFVDITSDWCSICQTNKAEVTHREQVVNALMADKV HHHHHHHHCCCCHHHHHHHEECCEEEEEEECHHHHHHHCCCCHHHHHHHHHHHHHHHCCE ILMQGNWSEADSTIAGYMKHEGVPGTPYNKVYGPRAPNGIVLPSTLTIEAVLNGLAQAKA EEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA