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The map label for this gene is djlA [H]

Identifier: 117921641

GI number: 117921641

Start: 3846058

End: 3846846

Strand: Reverse

Name: djlA [H]

Synonym: Shewana3_3203

Alternate gene names: 117921641

Gene position: 3846846-3846058 (Counterclockwise)

Preceding gene: 117921642

Following gene: 117921640

Centisome position: 77.37

GC content: 51.08

Gene sequence:

>789_bases
ATGCGCCTTTGGGGTAAGTTTTTTGGATTTGTTATCGGGTTTATGTTTGGCCGTATTTTCGGTGCTCTGCTGGGCTTATG
GCTTGGGCATCTCTACGACAAGCGCGCCGGTGGTGGCGCCAGTTTTAGTCAGATCTTAGGTCAAGCCAAGAATCGACAGG
GGATATTCTTTAACACCACCTTCGCCGTAATGGGTCATGTGGCCAAGGCGTCGGGTCGAGTGACTGAGACCGATATTCGT
ATCGCGACTATGTTGATGGACCAGATGCGCTTAACGGGTGAAGCCCGTAAAGAGGCGCAGCAGGCGTTCCGTGAGGGTAA
AGAGCCTGACTTTGACCTGCGTAGCAGCCTGCAAGCCTTTCGCGCTGTGACCCAAGGCCGTCAAGAACTGGTGCAAATGT
TTATCGAGATCCAAATTCAAACCGCCCTATCGGACGGTGAGCTCGATGCCGCAGAACATGCAATTCTGATGACGGTGGCC
CAAGAGTTAGGTTATGGTCGTGGGCAACTCGATGAATTACTTAAACGTTGGCAAGCGGAATACCGTTTCCACCAAACCTC
TAATGGGAATAAAACCTCGATTACCGACGCCTATCATTTGCTCGGCATTAATGCCGAGGCAACGGATCAGGAGGTCAAGC
GGGCTTATCGTAAGTTGATGAATGAACATCATCCCGATAAATTGGTTGCTAAGGGATTACCACCCGAGATGATGGAAATT
GCCAATCGTAAGGCGCAGGATATCCAAGCTGCGTACGACAGAGTGAAATCGGAGCGCGGCATGCGCTAA

Upstream 100 bases:

>100_bases
AGGCATATCGCCTAACGCTCAATGTTTAGCGCCTTGAGTGAACGGTTTCACTCGCGATGTCGATTGAGTGACTGAATAAA
TTATCAAATTGGGAATTAAG

Downstream 100 bases:

>100_bases
TGCTTCGGTTAACGTTGTCGACGCAAGGAATAATAACGATAGATAAGGGATTAAGATGAAATACGTTAACCGATTAAGTG
TGATTGCAGGTTTATTACCT

Product: Dna-J like membrane chaperone protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MRLWGKFFGFVIGFMFGRIFGALLGLWLGHLYDKRAGGGASFSQILGQAKNRQGIFFNTTFAVMGHVAKASGRVTETDIR
IATMLMDQMRLTGEARKEAQQAFREGKEPDFDLRSSLQAFRAVTQGRQELVQMFIEIQIQTALSDGELDAAEHAILMTVA
QELGYGRGQLDELLKRWQAEYRFHQTSNGNKTSITDAYHLLGINAEATDQEVKRAYRKLMNEHHPDKLVAKGLPPEMMEI
ANRKAQDIQAAYDRVKSERGMR

Sequences:

>Translated_262_residues
MRLWGKFFGFVIGFMFGRIFGALLGLWLGHLYDKRAGGGASFSQILGQAKNRQGIFFNTTFAVMGHVAKASGRVTETDIR
IATMLMDQMRLTGEARKEAQQAFREGKEPDFDLRSSLQAFRAVTQGRQELVQMFIEIQIQTALSDGELDAAEHAILMTVA
QELGYGRGQLDELLKRWQAEYRFHQTSNGNKTSITDAYHLLGINAEATDQEVKRAYRKLMNEHHPDKLVAKGLPPEMMEI
ANRKAQDIQAAYDRVKSERGMR
>Mature_262_residues
MRLWGKFFGFVIGFMFGRIFGALLGLWLGHLYDKRAGGGASFSQILGQAKNRQGIFFNTTFAVMGHVAKASGRVTETDIR
IATMLMDQMRLTGEARKEAQQAFREGKEPDFDLRSSLQAFRAVTQGRQELVQMFIEIQIQTALSDGELDAAEHAILMTVA
QELGYGRGQLDELLKRWQAEYRFHQTSNGNKTSITDAYHLLGINAEATDQEVKRAYRKLMNEHHPDKLVAKGLPPEMMEI
ANRKAQDIQAAYDRVKSERGMR

Specific function: Regulatory dnaK co-chaperone. Direct interaction between dnaK and djlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the rcsB/rcsC phosphotransfer sig

COG id: COG1076

COG function: function code O; DnaJ-domain-containing proteins 1

Gene ontology:

Cell location: Cell inner membrane; Single-pass type III membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Escherichia coli, GI1786241, Length=277, Percent_Identity=45.1263537906137, Blast_Score=235, Evalue=3e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR007791
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF05099 TerB [H]

EC number: NA

Molecular weight: Translated: 29620; Mature: 29620

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLWGKFFGFVIGFMFGRIFGALLGLWLGHLYDKRAGGGASFSQILGQAKNRQGIFFNTT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEHH
FAVMGHVAKASGRVTETDIRIATMLMDQMRLTGEARKEAQQAFREGKEPDFDLRSSLQAF
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
RAVTQGRQELVQMFIEIQIQTALSDGELDAAEHAILMTVAQELGYGRGQLDELLKRWQAE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
YRFHQTSNGNKTSITDAYHLLGINAEATDQEVKRAYRKLMNEHHPDKLVAKGLPPEMMEI
HHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHH
ANRKAQDIQAAYDRVKSERGMR
HCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]