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The map label for this gene is 117921637

Identifier: 117921637

GI number: 117921637

Start: 3838603

End: 3840882

Strand: Direct

Name: 117921637

Synonym: Shewana3_3199

Alternate gene names: NA

Gene position: 3838603-3840882 (Clockwise)

Preceding gene: 117921636

Following gene: 117921638

Centisome position: 77.2

GC content: 52.41

Gene sequence:

>2280_bases
ATGCGCCATAAGCCACATTCATTGCCAGCGAATCCTCTCCCTCGCTGGAAAACCAAATTCAAACAAACCAGCCTGATTGG
GTTAAGTCTCTTCTCCCCCGCACTGTTAGCCTGTGGCCCAGACTTTCCGCTGCAATTAACCCAAGACAGGCAAAATAACC
TAAGCTATTTACCGCAAACCAGCTTTAGCCAACAACTTAGCGGTTTAGCTAAACCACTGGCTTGGCAGTTTCAAGATGAA
CCTGCGGCGCAGGAATACCTCTGGGACGAGGTGCATAGTCGCTATCTTTCCCAGACTCGCGCCTATGAAAACAGCGAGTT
ATCCGAAGCTCAGCTCGCGCTTGTCAATAGTCTGCGTGATGCGCAAAGCTTGGCAGAGGCCGAGCAAATCGCCGCGCAGT
TAAAAGAGGGCTTAGCGCCCGCCTTAACCTGGTACAGCCTTGGTGCCATGGCGTTTGATCTCAAAGAGTACGATAAGGCC
AGCGATTACTTCAAAAAAGTCATCGCCCTACCTGACAGTGAGCGCGCGGGTCGCAGCCTGTGGGCGCTGTATAGCTTGTC
TCGTATCGAGCTGATAAAGAGCAAAACCGCCAGCGATAATAGCCATTTTGTTCAAGCCAATACTTACTTGCAGCAGCTAC
AAACTGAGGTGACCCAAGGCGCCGCCGATCCGCTACGCTTGAGTTTGGCAGGCCTTGGCGAGCAGGCTTATATTCTGCTG
CATCAAGGCCAAGCTCAAATTGAAGTCACTCGTGGGGAATATGAGCCGCCGAAAATTGATGTAGCCTTAAATCCTGCCAC
CTTAGATAAGGTCATTGAACTCTATGCCACCCAGTCGGTGCAGGGTGACAGTAGCGGTTATGATTCGCTGTTGATGTTAA
GCCGCAGCTTAATGTCTAAAAATATCAATGAACTAAAACCATTGTTACAGCAGCCGAGTGTGCAACAGTTGCTCATTGCC
TACTGGCAGAGCAGTGCTAATGATTTCGCCTTCGACGGACAACTGATGGACATGGGCCAAAAGGTTGCCGAAATCCTCAC
CGTATTCCCAACCGATGGCGTAGTACTGAGCCAGGGCGATAAGTTAGCGGCGATTTACTACCAATTGGGTGACTATGCCA
GCGCCGAGCGCATGCTGGCACTCGCCAAACCGAGCGGCTTAACTTGGTGGCTCACGGCGAAGCTTATGCTGCAAAAGGGT
GATCAAGCGCAAGCGGCTAAGGCCTATGCCCAAGCAGTGCATCATTTTCCAACCGATGCGATTTCAGGTACTGAGCATTT
AAATGCTAAGGATACCCAACAACAGGCTATCGATGCCGATGCCCAACAAGCCACCTATTGCCGTATTCGCGCCGAGCAGG
GCGTGCTATCCCTTGAACGGGGCGAATATGTCGATGCCCTAAACCAACTGTTCGCCAGTGGCGATGAGTATTGGCAGGAT
ATCGCCTATGTGGCCGAGCGCGTGCTCACCACCGCCGAGCTTAAGCTGTTTGTCGACGAGCATGTGCCGGTAATGAACTT
CGAGTATCCCAAGGACAGCGATTGGTACGACAGTGTCGAGCCACTCAATAATCGCCTGCGTTACTTACTGGGTCGTCGCT
TACTGCGTGAAGGCGCGATTGCCGAAGCGCCAGCTTATTTCAGTAATCCCACACTTAATGCCAATGTGCAGGAGTATGGC
AAGGCATTGACCACAGCCAAGAGTAGCAAGGGCATTGAGAGTGCCCGCGCCTATTGGACTGCCGCCGAACTCGCGCGTCA
TCAAGGCATGGAAATCTTAGGCTTTGAATTAGCGCCGGATTATTCGATTTACGCCGGGATGTTCGACTTAAGGGATTGGT
ATGCAGCGGATAAGCTCAGCGATAAAGAGCAGCAACGCATCAGCGCCAGCCAAGCGATTCCCGATAAACGTTTCCACTAT
CGCTACCAAGCCGCCGAGCTGGCAAGCAAGGCCGCCGACTTAGTCCCCCACAACAGCCAAGCCTATGCGGCGCTATTATG
CCAAGCCACAGGTTGGGTGTTATATCGCGATGATGAACTCGCCCAACGCTACTATAAAAAATACGTCGCCAACGGCCCCT
TTGTGCCTTGGGCCGAGAATTTTGGTACGCAGTGTGAAACCCCAGACTTTGACCGCGCCGTCGAACGGGAAAAAGCCAAC
CAAATCGCCGAGTGGAATGCGATTTACCACAAACTGAAAAAGCCTGTGGCCGTTAGCGTTGCCATCATCGCCGCCCTACT
CGGCGCTTACGCGTGGCGCAGAAGAAAGCGTAAACAGTAA

Upstream 100 bases:

>100_bases
CAGTTTGCACCGAATTTAATCTCAGCGGTCGAGCTAAGCCCAAACGGGCGCAGAGTTATCGGTTGGGCACGTTGTGAGTC
ATTACATTTACAGGGAATTT

Downstream 100 bases:

>100_bases
AAACACAAAGCGCCTTTCTTATCACCAAAGAAAGGCGCTAAAGCAGAGCTGATGAATTGCTGGAGTACAGGGAGAATTGC
CATTGTTTTCCCAGTGACAC

Product: tetratricopeptide domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family; Tetratricopeptide Domain-Containing Protein

Number of amino acids: Translated: 759; Mature: 759

Protein sequence:

>759_residues
MRHKPHSLPANPLPRWKTKFKQTSLIGLSLFSPALLACGPDFPLQLTQDRQNNLSYLPQTSFSQQLSGLAKPLAWQFQDE
PAAQEYLWDEVHSRYLSQTRAYENSELSEAQLALVNSLRDAQSLAEAEQIAAQLKEGLAPALTWYSLGAMAFDLKEYDKA
SDYFKKVIALPDSERAGRSLWALYSLSRIELIKSKTASDNSHFVQANTYLQQLQTEVTQGAADPLRLSLAGLGEQAYILL
HQGQAQIEVTRGEYEPPKIDVALNPATLDKVIELYATQSVQGDSSGYDSLLMLSRSLMSKNINELKPLLQQPSVQQLLIA
YWQSSANDFAFDGQLMDMGQKVAEILTVFPTDGVVLSQGDKLAAIYYQLGDYASAERMLALAKPSGLTWWLTAKLMLQKG
DQAQAAKAYAQAVHHFPTDAISGTEHLNAKDTQQQAIDADAQQATYCRIRAEQGVLSLERGEYVDALNQLFASGDEYWQD
IAYVAERVLTTAELKLFVDEHVPVMNFEYPKDSDWYDSVEPLNNRLRYLLGRRLLREGAIAEAPAYFSNPTLNANVQEYG
KALTTAKSSKGIESARAYWTAAELARHQGMEILGFELAPDYSIYAGMFDLRDWYAADKLSDKEQQRISASQAIPDKRFHY
RYQAAELASKAADLVPHNSQAYAALLCQATGWVLYRDDELAQRYYKKYVANGPFVPWAENFGTQCETPDFDRAVEREKAN
QIAEWNAIYHKLKKPVAVSVAIIAALLGAYAWRRRKRKQ

Sequences:

>Translated_759_residues
MRHKPHSLPANPLPRWKTKFKQTSLIGLSLFSPALLACGPDFPLQLTQDRQNNLSYLPQTSFSQQLSGLAKPLAWQFQDE
PAAQEYLWDEVHSRYLSQTRAYENSELSEAQLALVNSLRDAQSLAEAEQIAAQLKEGLAPALTWYSLGAMAFDLKEYDKA
SDYFKKVIALPDSERAGRSLWALYSLSRIELIKSKTASDNSHFVQANTYLQQLQTEVTQGAADPLRLSLAGLGEQAYILL
HQGQAQIEVTRGEYEPPKIDVALNPATLDKVIELYATQSVQGDSSGYDSLLMLSRSLMSKNINELKPLLQQPSVQQLLIA
YWQSSANDFAFDGQLMDMGQKVAEILTVFPTDGVVLSQGDKLAAIYYQLGDYASAERMLALAKPSGLTWWLTAKLMLQKG
DQAQAAKAYAQAVHHFPTDAISGTEHLNAKDTQQQAIDADAQQATYCRIRAEQGVLSLERGEYVDALNQLFASGDEYWQD
IAYVAERVLTTAELKLFVDEHVPVMNFEYPKDSDWYDSVEPLNNRLRYLLGRRLLREGAIAEAPAYFSNPTLNANVQEYG
KALTTAKSSKGIESARAYWTAAELARHQGMEILGFELAPDYSIYAGMFDLRDWYAADKLSDKEQQRISASQAIPDKRFHY
RYQAAELASKAADLVPHNSQAYAALLCQATGWVLYRDDELAQRYYKKYVANGPFVPWAENFGTQCETPDFDRAVEREKAN
QIAEWNAIYHKLKKPVAVSVAIIAALLGAYAWRRRKRKQ
>Mature_759_residues
MRHKPHSLPANPLPRWKTKFKQTSLIGLSLFSPALLACGPDFPLQLTQDRQNNLSYLPQTSFSQQLSGLAKPLAWQFQDE
PAAQEYLWDEVHSRYLSQTRAYENSELSEAQLALVNSLRDAQSLAEAEQIAAQLKEGLAPALTWYSLGAMAFDLKEYDKA
SDYFKKVIALPDSERAGRSLWALYSLSRIELIKSKTASDNSHFVQANTYLQQLQTEVTQGAADPLRLSLAGLGEQAYILL
HQGQAQIEVTRGEYEPPKIDVALNPATLDKVIELYATQSVQGDSSGYDSLLMLSRSLMSKNINELKPLLQQPSVQQLLIA
YWQSSANDFAFDGQLMDMGQKVAEILTVFPTDGVVLSQGDKLAAIYYQLGDYASAERMLALAKPSGLTWWLTAKLMLQKG
DQAQAAKAYAQAVHHFPTDAISGTEHLNAKDTQQQAIDADAQQATYCRIRAEQGVLSLERGEYVDALNQLFASGDEYWQD
IAYVAERVLTTAELKLFVDEHVPVMNFEYPKDSDWYDSVEPLNNRLRYLLGRRLLREGAIAEAPAYFSNPTLNANVQEYG
KALTTAKSSKGIESARAYWTAAELARHQGMEILGFELAPDYSIYAGMFDLRDWYAADKLSDKEQQRISASQAIPDKRFHY
RYQAAELASKAADLVPHNSQAYAALLCQATGWVLYRDDELAQRYYKKYVANGPFVPWAENFGTQCETPDFDRAVEREKAN
QIAEWNAIYHKLKKPVAVSVAIIAALLGAYAWRRRKRKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85191; Mature: 85191

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHKPHSLPANPLPRWKTKFKQTSLIGLSLFSPALLACGPDFPLQLTQDRQNNLSYLPQT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEECCCCCCCCCCCCCC
SFSQQLSGLAKPLAWQFQDEPAAQEYLWDEVHSRYLSQTRAYENSELSEAQLALVNSLRD
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AQSLAEAEQIAAQLKEGLAPALTWYSLGAMAFDLKEYDKASDYFKKVIALPDSERAGRSL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
WALYSLSRIELIKSKTASDNSHFVQANTYLQQLQTEVTQGAADPLRLSLAGLGEQAYILL
HHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCEEHHHCCCCEEEEEE
HQGQAQIEVTRGEYEPPKIDVALNPATLDKVIELYATQSVQGDSSGYDSLLMLSRSLMSK
ECCCEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
NINELKPLLQQPSVQQLLIAYWQSSANDFAFDGQLMDMGQKVAEILTVFPTDGVVLSQGD
CHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHCCCCCEEEECCC
KLAAIYYQLGDYASAERMLALAKPSGLTWWLTAKLMLQKGDQAQAAKAYAQAVHHFPTDA
CEEEEHHHHCCCCCHHHHHEEECCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH
ISGTEHLNAKDTQQQAIDADAQQATYCRIRAEQGVLSLERGEYVDALNQLFASGDEYWQD
CCCCCCCCCCHHHHHHHCCCHHHHHEEEEECCCCCEECCCCHHHHHHHHHHHCCHHHHHH
IAYVAERVLTTAELKLFVDEHVPVMNFEYPKDSDWYDSVEPLNNRLRYLLGRRLLREGAI
HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
AEAPAYFSNPTLNANVQEYGKALTTAKSSKGIESARAYWTAAELARHQGMEILGFELAPD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCC
YSIYAGMFDLRDWYAADKLSDKEQQRISASQAIPDKRFHYRYQAAELASKAADLVPHNSQ
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCH
AYAALLCQATGWVLYRDDELAQRYYKKYVANGPFVPWAENFGTQCETPDFDRAVEREKAN
HHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHH
QIAEWNAIYHKLKKPVAVSVAIIAALLGAYAWRRRKRKQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRHKPHSLPANPLPRWKTKFKQTSLIGLSLFSPALLACGPDFPLQLTQDRQNNLSYLPQT
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCEECCCCCCCCCCCCCC
SFSQQLSGLAKPLAWQFQDEPAAQEYLWDEVHSRYLSQTRAYENSELSEAQLALVNSLRD
CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AQSLAEAEQIAAQLKEGLAPALTWYSLGAMAFDLKEYDKASDYFKKVIALPDSERAGRSL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
WALYSLSRIELIKSKTASDNSHFVQANTYLQQLQTEVTQGAADPLRLSLAGLGEQAYILL
HHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCCCCEEHHHCCCCEEEEEE
HQGQAQIEVTRGEYEPPKIDVALNPATLDKVIELYATQSVQGDSSGYDSLLMLSRSLMSK
ECCCEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
NINELKPLLQQPSVQQLLIAYWQSSANDFAFDGQLMDMGQKVAEILTVFPTDGVVLSQGD
CHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHCCCCCEEEECCC
KLAAIYYQLGDYASAERMLALAKPSGLTWWLTAKLMLQKGDQAQAAKAYAQAVHHFPTDA
CEEEEHHHHCCCCCHHHHHEEECCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH
ISGTEHLNAKDTQQQAIDADAQQATYCRIRAEQGVLSLERGEYVDALNQLFASGDEYWQD
CCCCCCCCCCHHHHHHHCCCHHHHHEEEEECCCCCEECCCCHHHHHHHHHHHCCHHHHHH
IAYVAERVLTTAELKLFVDEHVPVMNFEYPKDSDWYDSVEPLNNRLRYLLGRRLLREGAI
HHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
AEAPAYFSNPTLNANVQEYGKALTTAKSSKGIESARAYWTAAELARHQGMEILGFELAPD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCC
YSIYAGMFDLRDWYAADKLSDKEQQRISASQAIPDKRFHYRYQAAELASKAADLVPHNSQ
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCH
AYAALLCQATGWVLYRDDELAQRYYKKYVANGPFVPWAENFGTQCETPDFDRAVEREKAN
HHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHH
QIAEWNAIYHKLKKPVAVSVAIIAALLGAYAWRRRKRKQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA