Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921638

Identifier: 117921638

GI number: 117921638

Start: 3842938

End: 3843972

Strand: Direct

Name: 117921638

Synonym: Shewana3_3200

Alternate gene names: NA

Gene position: 3842938-3843972 (Clockwise)

Preceding gene: 117921637

Following gene: 117921644

Centisome position: 77.29

GC content: 44.06

Gene sequence:

>1035_bases
ATGACTTCGGCAAGAAGACAGCTAATTGATGCTAATTCAACGCCCTTCTACCATGTGATAAATCGCTGTGTTAGAAGGGC
TTTTTTGTGCGGCGAGGATAAGTTATCTGGACGTAGTTACGAGCATCGACGTGGCTGGATAGTTGATAAAATCAAAGCCT
TGTCTGCGATATTTTGTATCGATATTTGCGCCTACGCGGTGATGAGCAATCACTATCATTTAGTGCTTAAAATAGATGTC
GATAAGGCCAAATCCTTAACGCAAAAAGACATTATCAGCCGTTGGTGCCAAATCACTAAAGGCCATGCAGTCGCGACTAA
GTATATGAATGGTGATGCATTAATCGAAGGTGAACGCATGTTGCTCGATGGCTTAATTACCGAGTGGCATGAACGATTAA
GCAGTATTTCTTGGTTTATGCGTTGTTTAAACGAAGAAATTGCCCGTAAGGCTAATCGTGAAGATGAGTGCAAAGGCGCC
TTTTGGGAAGGTCGTTTTAAATCGCAAGCACTGTTAGATGAGCAAGCCTTGCTCGCGTGCATGATGTATGTCGATTTAAA
TCCAATCAGAGCAGGCATTGCCGATTCTTTGCAATCCTCTGATTTTACATCGATTCAGGAGCGAATTAACTCGCTAGATT
CACCCAAGCGCCCATTAGCTATCTCAAAGCTACAAACTGACTTCTCAACTAATGAAGCTCATATTCCCCACAAGTCTCTG
GTCCAATTCGATGGCGCAGCTCACCTGAATCAGCAAGTGGGTATTCCGTTTCACTTTGCCGATTATCTCGAACTGATTGA
TTGGACAGGCCGCGCCATCCGCCTTGATAAGAAAGGCTATATCGATAATCAACGACCTAAGCTACTCAATGAATTAGGTG
TTGCGCCCGATGCGTGGCTCACATCAGCCAAAGAGTTTCGTCGTCAATACAGTGGCATAAGTGGTCGATGGGATAGCATG
TGTGAATTTAAAAAGCAGCATAACAGCGGCAAATGGTGTAAAGGTAAAGCCTCAAGCCAAGCGTTACATCCTTAA

Upstream 100 bases:

>100_bases
GTTATCTGGATAATAGCGGGGACAGCCATATCTTTTTGTGTTATTCAGCACCTTCAACTAGGCTTTAAAATATCCTGATT
TTGTCTGTGTGGAGTTTGCG

Downstream 100 bases:

>100_bases
GTTGCTCACGACTCAGCGTTTAGGATTATTTTTGTTTATCCGAAATGGAGATAATTTCGCGCAAAACATAGCACGCTTTT
GTCCCAAAGCGTGCTATGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 344; Mature: 343

Protein sequence:

>344_residues
MTSARRQLIDANSTPFYHVINRCVRRAFLCGEDKLSGRSYEHRRGWIVDKIKALSAIFCIDICAYAVMSNHYHLVLKIDV
DKAKSLTQKDIISRWCQITKGHAVATKYMNGDALIEGERMLLDGLITEWHERLSSISWFMRCLNEEIARKANREDECKGA
FWEGRFKSQALLDEQALLACMMYVDLNPIRAGIADSLQSSDFTSIQERINSLDSPKRPLAISKLQTDFSTNEAHIPHKSL
VQFDGAAHLNQQVGIPFHFADYLELIDWTGRAIRLDKKGYIDNQRPKLLNELGVAPDAWLTSAKEFRRQYSGISGRWDSM
CEFKKQHNSGKWCKGKASSQALHP

Sequences:

>Translated_344_residues
MTSARRQLIDANSTPFYHVINRCVRRAFLCGEDKLSGRSYEHRRGWIVDKIKALSAIFCIDICAYAVMSNHYHLVLKIDV
DKAKSLTQKDIISRWCQITKGHAVATKYMNGDALIEGERMLLDGLITEWHERLSSISWFMRCLNEEIARKANREDECKGA
FWEGRFKSQALLDEQALLACMMYVDLNPIRAGIADSLQSSDFTSIQERINSLDSPKRPLAISKLQTDFSTNEAHIPHKSL
VQFDGAAHLNQQVGIPFHFADYLELIDWTGRAIRLDKKGYIDNQRPKLLNELGVAPDAWLTSAKEFRRQYSGISGRWDSM
CEFKKQHNSGKWCKGKASSQALHP
>Mature_343_residues
TSARRQLIDANSTPFYHVINRCVRRAFLCGEDKLSGRSYEHRRGWIVDKIKALSAIFCIDICAYAVMSNHYHLVLKIDVD
KAKSLTQKDIISRWCQITKGHAVATKYMNGDALIEGERMLLDGLITEWHERLSSISWFMRCLNEEIARKANREDECKGAF
WEGRFKSQALLDEQALLACMMYVDLNPIRAGIADSLQSSDFTSIQERINSLDSPKRPLAISKLQTDFSTNEAHIPHKSLV
QFDGAAHLNQQVGIPFHFADYLELIDWTGRAIRLDKKGYIDNQRPKLLNELGVAPDAWLTSAKEFRRQYSGISGRWDSMC
EFKKQHNSGKWCKGKASSQALHP

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39298; Mature: 39167

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSARRQLIDANSTPFYHVINRCVRRAFLCGEDKLSGRSYEHRRGWIVDKIKALSAIFCI
CCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH
DICAYAVMSNHYHLVLKIDVDKAKSLTQKDIISRWCQITKGHAVATKYMNGDALIEGERM
HHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCHHH
LLDGLITEWHERLSSISWFMRCLNEEIARKANREDECKGAFWEGRFKSQALLDEQALLAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH
MMYVDLNPIRAGIADSLQSSDFTSIQERINSLDSPKRPLAISKLQTDFSTNEAHIPHKSL
HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHH
VQFDGAAHLNQQVGIPFHFADYLELIDWTGRAIRLDKKGYIDNQRPKLLNELGVAPDAWL
HHCCCCHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHCCCCHHHH
TSAKEFRRQYSGISGRWDSMCEFKKQHNSGKWCKGKASSQALHP
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSARRQLIDANSTPFYHVINRCVRRAFLCGEDKLSGRSYEHRRGWIVDKIKALSAIFCI
CCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH
DICAYAVMSNHYHLVLKIDVDKAKSLTQKDIISRWCQITKGHAVATKYMNGDALIEGERM
HHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCHHH
LLDGLITEWHERLSSISWFMRCLNEEIARKANREDECKGAFWEGRFKSQALLDEQALLAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH
MMYVDLNPIRAGIADSLQSSDFTSIQERINSLDSPKRPLAISKLQTDFSTNEAHIPHKSL
HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHH
VQFDGAAHLNQQVGIPFHFADYLELIDWTGRAIRLDKKGYIDNQRPKLLNELGVAPDAWL
HHCCCCHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHCCCCHHHH
TSAKEFRRQYSGISGRWDSMCEFKKQHNSGKWCKGKASSQALHP
HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA