| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921638
Identifier: 117921638
GI number: 117921638
Start: 3842938
End: 3843972
Strand: Direct
Name: 117921638
Synonym: Shewana3_3200
Alternate gene names: NA
Gene position: 3842938-3843972 (Clockwise)
Preceding gene: 117921637
Following gene: 117921644
Centisome position: 77.29
GC content: 44.06
Gene sequence:
>1035_bases ATGACTTCGGCAAGAAGACAGCTAATTGATGCTAATTCAACGCCCTTCTACCATGTGATAAATCGCTGTGTTAGAAGGGC TTTTTTGTGCGGCGAGGATAAGTTATCTGGACGTAGTTACGAGCATCGACGTGGCTGGATAGTTGATAAAATCAAAGCCT TGTCTGCGATATTTTGTATCGATATTTGCGCCTACGCGGTGATGAGCAATCACTATCATTTAGTGCTTAAAATAGATGTC GATAAGGCCAAATCCTTAACGCAAAAAGACATTATCAGCCGTTGGTGCCAAATCACTAAAGGCCATGCAGTCGCGACTAA GTATATGAATGGTGATGCATTAATCGAAGGTGAACGCATGTTGCTCGATGGCTTAATTACCGAGTGGCATGAACGATTAA GCAGTATTTCTTGGTTTATGCGTTGTTTAAACGAAGAAATTGCCCGTAAGGCTAATCGTGAAGATGAGTGCAAAGGCGCC TTTTGGGAAGGTCGTTTTAAATCGCAAGCACTGTTAGATGAGCAAGCCTTGCTCGCGTGCATGATGTATGTCGATTTAAA TCCAATCAGAGCAGGCATTGCCGATTCTTTGCAATCCTCTGATTTTACATCGATTCAGGAGCGAATTAACTCGCTAGATT CACCCAAGCGCCCATTAGCTATCTCAAAGCTACAAACTGACTTCTCAACTAATGAAGCTCATATTCCCCACAAGTCTCTG GTCCAATTCGATGGCGCAGCTCACCTGAATCAGCAAGTGGGTATTCCGTTTCACTTTGCCGATTATCTCGAACTGATTGA TTGGACAGGCCGCGCCATCCGCCTTGATAAGAAAGGCTATATCGATAATCAACGACCTAAGCTACTCAATGAATTAGGTG TTGCGCCCGATGCGTGGCTCACATCAGCCAAAGAGTTTCGTCGTCAATACAGTGGCATAAGTGGTCGATGGGATAGCATG TGTGAATTTAAAAAGCAGCATAACAGCGGCAAATGGTGTAAAGGTAAAGCCTCAAGCCAAGCGTTACATCCTTAA
Upstream 100 bases:
>100_bases GTTATCTGGATAATAGCGGGGACAGCCATATCTTTTTGTGTTATTCAGCACCTTCAACTAGGCTTTAAAATATCCTGATT TTGTCTGTGTGGAGTTTGCG
Downstream 100 bases:
>100_bases GTTGCTCACGACTCAGCGTTTAGGATTATTTTTGTTTATCCGAAATGGAGATAATTTCGCGCAAAACATAGCACGCTTTT GTCCCAAAGCGTGCTATGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTSARRQLIDANSTPFYHVINRCVRRAFLCGEDKLSGRSYEHRRGWIVDKIKALSAIFCIDICAYAVMSNHYHLVLKIDV DKAKSLTQKDIISRWCQITKGHAVATKYMNGDALIEGERMLLDGLITEWHERLSSISWFMRCLNEEIARKANREDECKGA FWEGRFKSQALLDEQALLACMMYVDLNPIRAGIADSLQSSDFTSIQERINSLDSPKRPLAISKLQTDFSTNEAHIPHKSL VQFDGAAHLNQQVGIPFHFADYLELIDWTGRAIRLDKKGYIDNQRPKLLNELGVAPDAWLTSAKEFRRQYSGISGRWDSM CEFKKQHNSGKWCKGKASSQALHP
Sequences:
>Translated_344_residues MTSARRQLIDANSTPFYHVINRCVRRAFLCGEDKLSGRSYEHRRGWIVDKIKALSAIFCIDICAYAVMSNHYHLVLKIDV DKAKSLTQKDIISRWCQITKGHAVATKYMNGDALIEGERMLLDGLITEWHERLSSISWFMRCLNEEIARKANREDECKGA FWEGRFKSQALLDEQALLACMMYVDLNPIRAGIADSLQSSDFTSIQERINSLDSPKRPLAISKLQTDFSTNEAHIPHKSL VQFDGAAHLNQQVGIPFHFADYLELIDWTGRAIRLDKKGYIDNQRPKLLNELGVAPDAWLTSAKEFRRQYSGISGRWDSM CEFKKQHNSGKWCKGKASSQALHP >Mature_343_residues TSARRQLIDANSTPFYHVINRCVRRAFLCGEDKLSGRSYEHRRGWIVDKIKALSAIFCIDICAYAVMSNHYHLVLKIDVD KAKSLTQKDIISRWCQITKGHAVATKYMNGDALIEGERMLLDGLITEWHERLSSISWFMRCLNEEIARKANREDECKGAF WEGRFKSQALLDEQALLACMMYVDLNPIRAGIADSLQSSDFTSIQERINSLDSPKRPLAISKLQTDFSTNEAHIPHKSLV QFDGAAHLNQQVGIPFHFADYLELIDWTGRAIRLDKKGYIDNQRPKLLNELGVAPDAWLTSAKEFRRQYSGISGRWDSMC EFKKQHNSGKWCKGKASSQALHP
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39298; Mature: 39167
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSARRQLIDANSTPFYHVINRCVRRAFLCGEDKLSGRSYEHRRGWIVDKIKALSAIFCI CCCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH DICAYAVMSNHYHLVLKIDVDKAKSLTQKDIISRWCQITKGHAVATKYMNGDALIEGERM HHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCHHH LLDGLITEWHERLSSISWFMRCLNEEIARKANREDECKGAFWEGRFKSQALLDEQALLAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH MMYVDLNPIRAGIADSLQSSDFTSIQERINSLDSPKRPLAISKLQTDFSTNEAHIPHKSL HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHH VQFDGAAHLNQQVGIPFHFADYLELIDWTGRAIRLDKKGYIDNQRPKLLNELGVAPDAWL HHCCCCHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHCCCCHHHH TSAKEFRRQYSGISGRWDSMCEFKKQHNSGKWCKGKASSQALHP HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TSARRQLIDANSTPFYHVINRCVRRAFLCGEDKLSGRSYEHRRGWIVDKIKALSAIFCI CCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHH DICAYAVMSNHYHLVLKIDVDKAKSLTQKDIISRWCQITKGHAVATKYMNGDALIEGERM HHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEECCHHH LLDGLITEWHERLSSISWFMRCLNEEIARKANREDECKGAFWEGRFKSQALLDEQALLAC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHH MMYVDLNPIRAGIADSLQSSDFTSIQERINSLDSPKRPLAISKLQTDFSTNEAHIPHKSL HHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHH VQFDGAAHLNQQVGIPFHFADYLELIDWTGRAIRLDKKGYIDNQRPKLLNELGVAPDAWL HHCCCCHHCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHCCCCHHHH TSAKEFRRQYSGISGRWDSMCEFKKQHNSGKWCKGKASSQALHP HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA