Click here to switch to the map view.

The map label for this gene is rstA [H]

Identifier: 117921622

GI number: 117921622

Start: 3822799

End: 3823512

Strand: Direct

Name: rstA [H]

Synonym: Shewana3_3184

Alternate gene names: 117921622

Gene position: 3822799-3823512 (Clockwise)

Preceding gene: 117921621

Following gene: 117921623

Centisome position: 76.88

GC content: 48.88

Gene sequence:

>714_bases
ATGACGAATCCACAATCACCCCACAGAGTGTTATTGGTTGAAGACGATGTCCGTCTTGCGAATTTAATCGTAGATTATTT
GAAATCACACGGTATGCACGTTGAAGTCGAGCGCCGCGGTGACACAGTCTTAACCCGCTTAATCAACTACAAGCCCGATA
TCATACTGCTAGACATTATGTTGCCAGGTCTAGATGGCCTTAGCCTGTGTGAAAAGCTGCCCGATTACTTTGCCGGCCCT
ATCCTGCTGATGAGTGCCCTAGGGTCGAGCGAAGATCAGATCAAAGGCTTAGAACTCGGTGCCGACGACTATGTGGTGAA
ACCCGTCGACCCCGCGCTGCTGGTTGCTCGTATCAACAACCTATTACGTCGCCAAAACCAACCGCCGCAGGCCGAATCCC
ACTGCCTGACCTTTGGTAAGCTGAGTATCGATCCCCATACCCATGCTATCCGCCTCGACAATAAAGAAGTCGATCTCACC
AGCCATGAGTTTGAACTCCTCTGGTTACTGGCCTCACAAGCGGGACAAGTGCTGAGCCGTCAGTACATCTATCAATTACT
GCTTAACATTGATTTTGATGGTAAAGATAGAAAGATAGACGTACGTATTTCAAGGCTGCGTAAAAAGCTCAACGACAATA
TCGAGACCCCATTCAGAATTAAAACCGTCTGGGGACAGGGTTATCTCTTCGCCCCCGAGGCTTGGAACAACTAA

Upstream 100 bases:

>100_bases
AGGACACCAATCAAACACTGGCTGGAGCCAAATTAAAAATTACGTCAACCTCGCAGCCTCAGGTGCGCAGACGTTACCGT
AACCCTTGGAGTTTATTTTA

Downstream 100 bases:

>100_bases
GAGCTGCCGTGAAACGTCTCTTTATCAGCTTATATTTACTGCTGAGCCTCAGTTTTCTAGGCATAGGCTGGACACTGGAC
AGCCTGTGGCAGAAAAATGT

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTNPQSPHRVLLVEDDVRLANLIVDYLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIMLPGLDGLSLCEKLPDYFAGP
ILLMSALGSSEDQIKGLELGADDYVVKPVDPALLVARINNLLRRQNQPPQAESHCLTFGKLSIDPHTHAIRLDNKEVDLT
SHEFELLWLLASQAGQVLSRQYIYQLLLNIDFDGKDRKIDVRISRLRKKLNDNIETPFRIKTVWGQGYLFAPEAWNN

Sequences:

>Translated_237_residues
MTNPQSPHRVLLVEDDVRLANLIVDYLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIMLPGLDGLSLCEKLPDYFAGP
ILLMSALGSSEDQIKGLELGADDYVVKPVDPALLVARINNLLRRQNQPPQAESHCLTFGKLSIDPHTHAIRLDNKEVDLT
SHEFELLWLLASQAGQVLSRQYIYQLLLNIDFDGKDRKIDVRISRLRKKLNDNIETPFRIKTVWGQGYLFAPEAWNN
>Mature_236_residues
TNPQSPHRVLLVEDDVRLANLIVDYLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIMLPGLDGLSLCEKLPDYFAGPI
LLMSALGSSEDQIKGLELGADDYVVKPVDPALLVARINNLLRRQNQPPQAESHCLTFGKLSIDPHTHAIRLDNKEVDLTS
HEFELLWLLASQAGQVLSRQYIYQLLLNIDFDGKDRKIDVRISRLRKKLNDNIETPFRIKTVWGQGYLFAPEAWNN

Specific function: Member of the two-component regulatory system rstB/rstA [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI145693140, Length=237, Percent_Identity=44.3037974683544, Blast_Score=197, Evalue=5e-52,
Organism=Escherichia coli, GI1789809, Length=235, Percent_Identity=37.0212765957447, Blast_Score=152, Evalue=1e-38,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=37.4449339207048, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI87082012, Length=227, Percent_Identity=34.8017621145374, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=33.920704845815, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=35.9649122807018, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=36.322869955157, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI1787229, Length=233, Percent_Identity=33.0472103004292, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1790860, Length=220, Percent_Identity=35.4545454545455, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=29.4871794871795, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789402, Length=224, Percent_Identity=32.1428571428571, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1786911, Length=233, Percent_Identity=31.7596566523605, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=30.1310043668122, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1787375, Length=226, Percent_Identity=31.4159292035398, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1788550, Length=104, Percent_Identity=28.8461538461538, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26985; Mature: 26853

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNPQSPHRVLLVEDDVRLANLIVDYLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIM
CCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEEEE
LPGLDGLSLCEKLPDYFAGPILLMSALGSSEDQIKGLELGADDYVVKPVDPALLVARINN
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEECCCCEEECCCCHHHHHHHHHH
LLRRQNQPPQAESHCLTFGKLSIDPHTHAIRLDNKEVDLTSHEFELLWLLASQAGQVLSR
HHHHCCCCCCCHHHEEEEEEEEECCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHH
QYIYQLLLNIDFDGKDRKIDVRISRLRKKLNDNIETPFRIKTVWGQGYLFAPEAWNN
HHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCC
>Mature Secondary Structure 
TNPQSPHRVLLVEDDVRLANLIVDYLKSHGMHVEVERRGDTVLTRLINYKPDIILLDIM
CCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEEEEEE
LPGLDGLSLCEKLPDYFAGPILLMSALGSSEDQIKGLELGADDYVVKPVDPALLVARINN
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEECCCCEEECCCCHHHHHHHHHH
LLRRQNQPPQAESHCLTFGKLSIDPHTHAIRLDNKEVDLTSHEFELLWLLASQAGQVLSR
HHHHCCCCCCCHHHEEEEEEEEECCCCEEEEECCCEEECCCCCHHHHHHHHHHHHHHHHH
QYIYQLLLNIDFDGKDRKIDVRISRLRKKLNDNIETPFRIKTVWGQGYLFAPEAWNN
HHHHHHHHHCCCCCCCCEEHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1495392 [H]