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The map label for this gene is yaaH [H]

Identifier: 117921618

GI number: 117921618

Start: 3819635

End: 3820204

Strand: Reverse

Name: yaaH [H]

Synonym: Shewana3_3180

Alternate gene names: 117921618

Gene position: 3820204-3819635 (Counterclockwise)

Preceding gene: 117921624

Following gene: 117921614

Centisome position: 76.83

GC content: 46.84

Gene sequence:

>570_bases
GTGTCGACGAAACTGGCGAATCCTGCTCCATTAGGTTTAATGGGCTTTGGTATGACGACTATCCTGCTGAACATTCACAA
TGCGGGCTATTTTCCGATTGATGCAATGATCTTAGCGATGGGCATTTTCTATGGCGGACTTGGCCAAATTATTGTCGGCA
TTATGTGTTTTATGCGGGGTGATACCTTTGGGACAACCGCATTTACCTCCTACGGTTTATTTTGGCTAACCTTAGTCGGG
CTGATTTTAATGCCTAATGCCGGAATTGCGGCGAGCCCAACTCACTTTATGGGATGGTATTTAACCCTGTGGGGGATCTT
TACTGCTTTTATGTTCGTCGGTTCGCTACGCTACCCAAGAGCGAAACAGTTTGTGTTTGCCTCGCTCACCATTTTGTTCT
TCCTGTTGGCGGCAAGAGATTTCACTGGCAGCGCCTTAATTGGCACTATCGCGGGTTTTGAAGGGATTATCTGTGGCGCG
AGTGCGATTTACTTTGCCATGGCGCAAGTGCTCAACAATGAATATGGTCGCACGATTTTGCCGATTGGTGAGTTAAAAGC
AAAGGCTTAA

Upstream 100 bases:

>100_bases
CTTTATTAGTTATCTAGAATTCGCCGCTTTTTATAAAATAATAAGTACCTAGAGTGTATCTAGGTGCTGAGATTAACTTA
TTTATTTTTGGGGACTTCCT

Downstream 100 bases:

>100_bases
GCGTCATTATTGATGTTGAGTATTTAACAAAAAGGCTGAATGATTCAGCCTTTTTGTTTTTGAATGCCTGTGCCGTTTAG
GTTAGATTTTTGCCTTAATA

Product: GPR1/FUN34/yaaH family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSTKLANPAPLGLMGFGMTTILLNIHNAGYFPIDAMILAMGIFYGGLGQIIVGIMCFMRGDTFGTTAFTSYGLFWLTLVG
LILMPNAGIAASPTHFMGWYLTLWGIFTAFMFVGSLRYPRAKQFVFASLTILFFLLAARDFTGSALIGTIAGFEGIICGA
SAIYFAMAQVLNNEYGRTILPIGELKAKA

Sequences:

>Translated_189_residues
MSTKLANPAPLGLMGFGMTTILLNIHNAGYFPIDAMILAMGIFYGGLGQIIVGIMCFMRGDTFGTTAFTSYGLFWLTLVG
LILMPNAGIAASPTHFMGWYLTLWGIFTAFMFVGSLRYPRAKQFVFASLTILFFLLAARDFTGSALIGTIAGFEGIICGA
SAIYFAMAQVLNNEYGRTILPIGELKAKA
>Mature_188_residues
STKLANPAPLGLMGFGMTTILLNIHNAGYFPIDAMILAMGIFYGGLGQIIVGIMCFMRGDTFGTTAFTSYGLFWLTLVGL
ILMPNAGIAASPTHFMGWYLTLWGIFTAFMFVGSLRYPRAKQFVFASLTILFFLLAARDFTGSALIGTIAGFEGIICGAS
AIYFAMAQVLNNEYGRTILPIGELKAKA

Specific function: Unknown

COG id: COG1584

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GPR1/FUN34/yaaH family [H]

Homologues:

Organism=Escherichia coli, GI1786191, Length=184, Percent_Identity=63.5869565217391, Blast_Score=230, Evalue=4e-62,
Organism=Saccharomyces cerevisiae, GI6324329, Length=180, Percent_Identity=35, Blast_Score=78, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6319855, Length=113, Percent_Identity=38.9380530973451, Blast_Score=69, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000791 [H]

Pfam domain/function: PF01184 Grp1_Fun34_YaaH [H]

EC number: NA

Molecular weight: Translated: 20375; Mature: 20243

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS01114 GPR1_FUN34_YAAH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKLANPAPLGLMGFGMTTILLNIHNAGYFPIDAMILAMGIFYGGLGQIIVGIMCFMRG
CCCCCCCCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
DTFGTTAFTSYGLFWLTLVGLILMPNAGIAASPTHFMGWYLTLWGIFTAFMFVGSLRYPR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
AKQFVFASLTILFFLLAARDFTGSALIGTIAGFEGIICGASAIYFAMAQVLNNEYGRTIL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
PIGELKAKA
EHHHHCCCC
>Mature Secondary Structure 
STKLANPAPLGLMGFGMTTILLNIHNAGYFPIDAMILAMGIFYGGLGQIIVGIMCFMRG
CCCCCCCCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
DTFGTTAFTSYGLFWLTLVGLILMPNAGIAASPTHFMGWYLTLWGIFTAFMFVGSLRYPR
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH
AKQFVFASLTILFFLLAARDFTGSALIGTIAGFEGIICGASAIYFAMAQVLNNEYGRTIL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
PIGELKAKA
EHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]