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The map label for this gene is ydhL [H]

Identifier: 117921624

GI number: 117921624

Start: 3824818

End: 3825126

Strand: Reverse

Name: ydhL [H]

Synonym: Shewana3_3186

Alternate gene names: 117921624

Gene position: 3825126-3824818 (Counterclockwise)

Preceding gene: 117921626

Following gene: 117921618

Centisome position: 76.93

GC content: 51.78

Gene sequence:

>309_bases
ATGGAACAGTTAGCCTTTTTCGAAATACCTAGCCCCTGCATCGGTGTGTGCCAAACCGATGCCCGCGGCTATTGCAAAGG
TTGCCTGCGTAATCGTGAGGAGCGATTCAATTGGTTGCACTTCACCGATGCCCAAAAGCATGATGTGATCCGTTTATGCC
ACCAACGTAAACGTCGGCGGCAGTTGGCCTTATACAAAGCTCGTCAGCAAGCACTTGAGCAGGAGAGGGCGGCGCTTAAT
CCACAACTCGATTTTGAGCCGCAAGACGCCGCTGAGTTAGACCTCGGGGATTTTGACCTCGATGAATAA

Upstream 100 bases:

>100_bases
GCAAGTAATTTAGTGAAAAGTGTTTAATTTTTGTCTTGTTTTACTTGTGTATTTAAGGTCACGTATTTTAGATGCTTAAC
TGGTAGAGTCGTTCAACATC

Downstream 100 bases:

>100_bases
TCTAACTTTGAGAGCGATACTTAAGGGCTTAAATTTCCCGTTTCTTTGGCCAGCTTAAGGTAAAGCGCGTTTGAGTGGGA
TTGCTGCTGACGCTTACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MEQLAFFEIPSPCIGVCQTDARGYCKGCLRNREERFNWLHFTDAQKHDVIRLCHQRKRRRQLALYKARQQALEQERAALN
PQLDFEPQDAAELDLGDFDLDE

Sequences:

>Translated_102_residues
MEQLAFFEIPSPCIGVCQTDARGYCKGCLRNREERFNWLHFTDAQKHDVIRLCHQRKRRRQLALYKARQQALEQERAALN
PQLDFEPQDAAELDLGDFDLDE
>Mature_102_residues
MEQLAFFEIPSPCIGVCQTDARGYCKGCLRNREERFNWLHFTDAQKHDVIRLCHQRKRRRQLALYKARQQALEQERAALN
PQLDFEPQDAAELDLGDFDLDE

Specific function: Unknown

COG id: COG3313

COG function: function code R; Predicted Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081952, Length=73, Percent_Identity=50.6849315068493, Blast_Score=82, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010710 [H]

Pfam domain/function: PF06945 DUF1289 [H]

EC number: NA

Molecular weight: Translated: 12037; Mature: 12037

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLAFFEIPSPCIGVCQTDARGYCKGCLRNREERFNWLHFTDAQKHDVIRLCHQRKRRR
CCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QLALYKARQQALEQERAALNPQLDFEPQDAAELDLGDFDLDE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEQLAFFEIPSPCIGVCQTDARGYCKGCLRNREERFNWLHFTDAQKHDVIRLCHQRKRRR
CCCCCCCCCCCCHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
QLALYKARQQALEQERAALNPQLDFEPQDAAELDLGDFDLDE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]