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The map label for this gene is oadB [H]

Identifier: 117921602

GI number: 117921602

Start: 3796081

End: 3797211

Strand: Reverse

Name: oadB [H]

Synonym: Shewana3_3164

Alternate gene names: 117921602

Gene position: 3797211-3796081 (Counterclockwise)

Preceding gene: 117921603

Following gene: 117921600

Centisome position: 76.37

GC content: 52.43

Gene sequence:

>1131_bases
ATGGATGGTTTACTGGCTTTCTGGGCCGAAACGGGCATAGCCCATTTTACTGCAGGGCAAGCTTTGATGATGGCTGTGGG
CGCCTTGCTGTTATACCTTGCGATAGTGCGTGGCTTTGAGCCACTACTGTTGTTACCTATTGGTTTTGGCGCCGTGCTGG
CGAATATTCCCAACGCGGGCTTTACCGAAGAGGGCGGTATGCTGTATTACGCCTACCATGTTGGGATTGAAACCGGGGTG
TTTCCGCTGCTGATCTTTATGGGAGTTGGCGCACTGACAGATTTTAGTGCGCTGATTGCCAATCCAAAGACCTTGCTGCT
CGGCGCGGCGGCGCAGTTTGGGATTTTCGCGACCTTAATTGGGGCGATAGCGCTAAATCTAGTACCAGGTTTTGAATTTA
CCATGCAGGATGCCGCTGCCATTGCCATTATCGGTGGCGCGGATGGACCAACGGCGATTTTCCTTGCCTCTAAGCTTGCG
CCTGAGTTACTGGGCGCGATTGCTGTGGCGGCCTATTCCTATATGGCGCTGGTACCGATTATCCAGCCGCCGATAATGCG
CTTACTCACGACCCAAGCCGAGCGTGAGATAAAGATGGAGCAGCTCAGGGAGGTGAGTAAGAAGGAGAAGATTATTTTCC
CGTTGATGGTATTGGGCTTAACGATTTTATTCTTACCCGCAGCGACTCCTCTGGTTGGCATGTTTTGCCTTGGCAACCTA
ATGCGTGAGTCGGGTGTGGTCGATAGATTATCGAAAACGGCGCAAAACGAGCTGATTAATATCGTCACCATTTTCTTAGG
TTTGGCCGTCGGTTCTAAACTTTCTGCGGAGCAATTCTTGCGCGTCGAAACCTTGGGGATCTTGGTTCTGGGGGCGTTGG
CATTCGGGATTGGTACCGCAGCAGGGGTGCTGATGGCAAAACTGATGTGTAAATTAACTGGCGGTAAGGTCAACCCGTTA
ATTGGCGCGGCGGGCGTATCGGCAGTGCCAATGGCGGCAAGGGTGGTGAATAAGGTGGGGTTAGAGGCTAATCACCATAA
CTTTTTGTTGATGCATGCCATGGGGCCAAACGTTGCTGGGGTATTAGGCTCTGCGGTGGCGGCTGGGATTTTACTGGCTG
TGCTTGGCTAG

Upstream 100 bases:

>100_bases
TCCGCGCTCAGGGAGATGGCATTATTACCCATCTCTTTGTGAAAGAAGGGGATTCGGTTGCCGTGGGTTCTCAATTACTG
GCCTTAGCTTAGGAGTCGTT

Downstream 100 bases:

>100_bases
GCTGCGTGTTTGGTGGCTAGAGCAAAGCCTATTGGTTAACAATAGGCTTTTAAGCCGTTAACCACAGGAGCAGCATTAGC
AGCAAAATCACCGTGCCGCT

Product: sodium ion-translocating decarboxylase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MDGLLAFWAETGIAHFTAGQALMMAVGALLLYLAIVRGFEPLLLLPIGFGAVLANIPNAGFTEEGGMLYYAYHVGIETGV
FPLLIFMGVGALTDFSALIANPKTLLLGAAAQFGIFATLIGAIALNLVPGFEFTMQDAAAIAIIGGADGPTAIFLASKLA
PELLGAIAVAAYSYMALVPIIQPPIMRLLTTQAEREIKMEQLREVSKKEKIIFPLMVLGLTILFLPAATPLVGMFCLGNL
MRESGVVDRLSKTAQNELINIVTIFLGLAVGSKLSAEQFLRVETLGILVLGALAFGIGTAAGVLMAKLMCKLTGGKVNPL
IGAAGVSAVPMAARVVNKVGLEANHHNFLLMHAMGPNVAGVLGSAVAAGILLAVLG

Sequences:

>Translated_376_residues
MDGLLAFWAETGIAHFTAGQALMMAVGALLLYLAIVRGFEPLLLLPIGFGAVLANIPNAGFTEEGGMLYYAYHVGIETGV
FPLLIFMGVGALTDFSALIANPKTLLLGAAAQFGIFATLIGAIALNLVPGFEFTMQDAAAIAIIGGADGPTAIFLASKLA
PELLGAIAVAAYSYMALVPIIQPPIMRLLTTQAEREIKMEQLREVSKKEKIIFPLMVLGLTILFLPAATPLVGMFCLGNL
MRESGVVDRLSKTAQNELINIVTIFLGLAVGSKLSAEQFLRVETLGILVLGALAFGIGTAAGVLMAKLMCKLTGGKVNPL
IGAAGVSAVPMAARVVNKVGLEANHHNFLLMHAMGPNVAGVLGSAVAAGILLAVLG
>Mature_376_residues
MDGLLAFWAETGIAHFTAGQALMMAVGALLLYLAIVRGFEPLLLLPIGFGAVLANIPNAGFTEEGGMLYYAYHVGIETGV
FPLLIFMGVGALTDFSALIANPKTLLLGAAAQFGIFATLIGAIALNLVPGFEFTMQDAAAIAIIGGADGPTAIFLASKLA
PELLGAIAVAAYSYMALVPIIQPPIMRLLTTQAEREIKMEQLREVSKKEKIIFPLMVLGLTILFLPAATPLVGMFCLGNL
MRESGVVDRLSKTAQNELINIVTIFLGLAVGSKLSAEQFLRVETLGILVLGALAFGIGTAAGVLMAKLMCKLTGGKVNPL
IGAAGVSAVPMAARVVNKVGLEANHHNFLLMHAMGPNVAGVLGSAVAAGILLAVLG

Specific function: Lyase and sodium transporter [H]

COG id: COG1883

COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gcdB/mmdB/oadB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005661 [H]

Pfam domain/function: PF03977 OAD_beta [H]

EC number: =4.1.1.3 [H]

Molecular weight: Translated: 38994; Mature: 38994

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGLLAFWAETGIAHFTAGQALMMAVGALLLYLAIVRGFEPLLLLPIGFGAVLANIPNAG
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCC
FTEEGGMLYYAYHVGIETGVFPLLIFMGVGALTDFSALIANPKTLLLGAAAQFGIFATLI
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHH
GAIALNLVPGFEFTMQDAAAIAIIGGADGPTAIFLASKLAPELLGAIAVAAYSYMALVPI
HHHHHHHCCCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQPPIMRLLTTQAEREIKMEQLREVSKKEKIIFPLMVLGLTILFLPAATPLVGMFCLGNL
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRESGVVDRLSKTAQNELINIVTIFLGLAVGSKLSAEQFLRVETLGILVLGALAFGIGTA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AGVLMAKLMCKLTGGKVNPLIGAAGVSAVPMAARVVNKVGLEANHHNFLLMHAMGPNVAG
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
VLGSAVAAGILLAVLG
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDGLLAFWAETGIAHFTAGQALMMAVGALLLYLAIVRGFEPLLLLPIGFGAVLANIPNAG
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHCCCCCC
FTEEGGMLYYAYHVGIETGVFPLLIFMGVGALTDFSALIANPKTLLLGAAAQFGIFATLI
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHH
GAIALNLVPGFEFTMQDAAAIAIIGGADGPTAIFLASKLAPELLGAIAVAAYSYMALVPI
HHHHHHHCCCCCHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQPPIMRLLTTQAEREIKMEQLREVSKKEKIIFPLMVLGLTILFLPAATPLVGMFCLGNL
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MRESGVVDRLSKTAQNELINIVTIFLGLAVGSKLSAEQFLRVETLGILVLGALAFGIGTA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AGVLMAKLMCKLTGGKVNPLIGAAGVSAVPMAARVVNKVGLEANHHNFLLMHAMGPNVAG
HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHH
VLGSAVAAGILLAVLG
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]