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The map label for this gene is 117921564

Identifier: 117921564

GI number: 117921564

Start: 3751819

End: 3752301

Strand: Direct

Name: 117921564

Synonym: Shewana3_3126

Alternate gene names: NA

Gene position: 3751819-3752301 (Clockwise)

Preceding gene: 117921563

Following gene: 117921578

Centisome position: 75.46

GC content: 40.79

Gene sequence:

>483_bases
ATGCTAAATAAATTGTTTGGTTTCACACTGGTTGAACTGATGGTTACGATTGCAGTGGCTGCAATATTATTAACTATCGG
AGTACCATCTTTAATATCCGTCTATGAAGGTGTGCGCGTTAATAATAATATCGCCAAAATTCATGACATTATGGTTTTTG
CCAGAAATCAAGCCGTCAGCTATGGCGCAACAATTAAAGTTTGTGCATCAAACGGAAGTGCATGTGGTACAAATTGGGGA
AATGGGATTAAAGTGATCAGCCCTGATAATAAAGATATTCGCGTTATTGACGCATTCAATACAAATGACAGTGTAAAAAG
CAATTCGGCGAGTTTTACCTTTAGCTCTGAAGGCATGTTATCAGCAAACAGCGCTGTAGAAATCATCTACTGCCCAGGCG
GCTCCGCGACCAACTCCAAGAGTGTAAACATAAGCTCTAGCGGACTAATCTCCTACGGAGCAGATGGTAAAAGCTGTTCA
TGA

Upstream 100 bases:

>100_bases
TATCTTTTAGAAATTAAACAGCATAAAGGAAACAACTTAGATACTGAAATCCCGCCTATTCTCGCTTATACTTTAGTTTG
TATAAGTGAGGGTTGAGTGC

Downstream 100 bases:

>100_bases
GCCAGAAGATATGTCCGCACACATAAGCTTATCTCAAGGTTAGCTCATCAATTTTCTTACTGTTTTCATTAGTAAACTCT
TTGCTAAGCTCGACACACTC

Product: methylation site containing protein

Products: NA

Alternate protein names: Methylation Site Containing Protein; Prepilin-Type Cleavage/Methylation-Like Protein; Tfp Pilus Assembly Protein FimT; General Secretion Pathway Protein H

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLNKLFGFTLVELMVTIAVAAILLTIGVPSLISVYEGVRVNNNIAKIHDIMVFARNQAVSYGATIKVCASNGSACGTNWG
NGIKVISPDNKDIRVIDAFNTNDSVKSNSASFTFSSEGMLSANSAVEIIYCPGGSATNSKSVNISSSGLISYGADGKSCS

Sequences:

>Translated_160_residues
MLNKLFGFTLVELMVTIAVAAILLTIGVPSLISVYEGVRVNNNIAKIHDIMVFARNQAVSYGATIKVCASNGSACGTNWG
NGIKVISPDNKDIRVIDAFNTNDSVKSNSASFTFSSEGMLSANSAVEIIYCPGGSATNSKSVNISSSGLISYGADGKSCS
>Mature_160_residues
MLNKLFGFTLVELMVTIAVAAILLTIGVPSLISVYEGVRVNNNIAKIHDIMVFARNQAVSYGATIKVCASNGSACGTNWG
NGIKVISPDNKDIRVIDAFNTNDSVKSNSASFTFSSEGMLSANSAVEIIYCPGGSATNSKSVNISSSGLISYGADGKSCS

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16639; Mature: 16639

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKLFGFTLVELMVTIAVAAILLTIGVPSLISVYEGVRVNNNIAKIHDIMVFARNQAVS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEECCCHHHHEEEEEEECCCCEE
YGATIKVCASNGSACGTNWGNGIKVISPDNKDIRVIDAFNTNDSVKSNSASFTFSSEGML
CCCEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCE
SANSAVEIIYCPGGSATNSKSVNISSSGLISYGADGKSCS
ECCCEEEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCC
>Mature Secondary Structure
MLNKLFGFTLVELMVTIAVAAILLTIGVPSLISVYEGVRVNNNIAKIHDIMVFARNQAVS
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEECCCHHHHEEEEEEECCCCEE
YGATIKVCASNGSACGTNWGNGIKVISPDNKDIRVIDAFNTNDSVKSNSASFTFSSEGML
CCCEEEEEECCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCE
SANSAVEIIYCPGGSATNSKSVNISSSGLISYGADGKSCS
ECCCEEEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA