Click here to switch to the map view.

The map label for this gene is 117921563

Identifier: 117921563

GI number: 117921563

Start: 3751153

End: 3751665

Strand: Direct

Name: 117921563

Synonym: Shewana3_3125

Alternate gene names: NA

Gene position: 3751153-3751665 (Clockwise)

Preceding gene: 117921560

Following gene: 117921564

Centisome position: 75.44

GC content: 42.88

Gene sequence:

>513_bases
ATGAAAACTCTACCACATGGCTTTAGCCTGATTGAACTCATCACTACGGTATCCATTTCGACCATTCTGTTATCGATTGG
CGCTCCCTCGTTAAGCGATTTCAACACAAGATTCAGAGCTGATAGTAATATCAAAGTCATCCAGCAAACACTAATGCTCG
CCCGAAATCATGCCATTTCCTTCAATCGAAAAGTGACAGTCTGTGCCTTAAGCAACAATCAGTGCACATCTAACTGGCAG
CTTGGTTTAACGGTATTTATTGATGTAAACAGCAATAGTCAACTTGATGGCAATGAAACGACTATTTTTACCACTAACGC
TTTCAATGCCAGTGATATTGTCATCTACAATCGAACCTCAATTCGTTTTCAACCAGACGGTCTTGCCTCTGGTACTAATG
GAACATTGAAGTATTGTCCATCAAGTCCCACGAGCCCTTACTCGCGAGGGATTGTGGTAAATCAAGCTGGCAGGGCAAGA
CTATCGACAGATGCCAATATCCGCTGCGGATAA

Upstream 100 bases:

>100_bases
AATCTAAAAGTCTCATTGGTACGCTTCTATACTTAAACAGCAGCAGTTTTGCTCCAAAGGCTCGTAGGATGCGAGCGACA
TTTATAACAAAGGAACTGTT

Downstream 100 bases:

>100_bases
ATGGCGCGTATTGATTGAAGGCGATATCAACTAACAACATAAAGGATTGAGACTATCTTTTAGAAATTAAACAGCATAAA
GGAAACAACTTAGATACTGA

Product: methylation site containing protein

Products: NA

Alternate protein names: Methylation Site Containing Protein; Tfp Pilus Assembly Protein FimT; Type-4 Fimbrial Pilin Related Signal Peptide Protein; Type IV Pilin; Type IV Pilus Assembly Protein Fimt; Prokaryotic N-Terminal Methylation Motif Domain Protein; Fimbrial Pilin Related Signal Peptide Protein; Prepilin-Type Cleavage/Methylation-Like Protein; Type IV Fimbrial Fimt-Related Pilin; General Secretion Pathway Protein H; Methylation

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKTLPHGFSLIELITTVSISTILLSIGAPSLSDFNTRFRADSNIKVIQQTLMLARNHAISFNRKVTVCALSNNQCTSNWQ
LGLTVFIDVNSNSQLDGNETTIFTTNAFNASDIVIYNRTSIRFQPDGLASGTNGTLKYCPSSPTSPYSRGIVVNQAGRAR
LSTDANIRCG

Sequences:

>Translated_170_residues
MKTLPHGFSLIELITTVSISTILLSIGAPSLSDFNTRFRADSNIKVIQQTLMLARNHAISFNRKVTVCALSNNQCTSNWQ
LGLTVFIDVNSNSQLDGNETTIFTTNAFNASDIVIYNRTSIRFQPDGLASGTNGTLKYCPSSPTSPYSRGIVVNQAGRAR
LSTDANIRCG
>Mature_170_residues
MKTLPHGFSLIELITTVSISTILLSIGAPSLSDFNTRFRADSNIKVIQQTLMLARNHAISFNRKVTVCALSNNQCTSNWQ
LGLTVFIDVNSNSQLDGNETTIFTTNAFNASDIVIYNRTSIRFQPDGLASGTNGTLKYCPSSPTSPYSRGIVVNQAGRAR
LSTDANIRCG

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18465; Mature: 18465

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLPHGFSLIELITTVSISTILLSIGAPSLSDFNTRFRADSNIKVIQQTLMLARNHAIS
CCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCEEE
FNRKVTVCALSNNQCTSNWQLGLTVFIDVNSNSQLDGNETTIFTTNAFNASDIVIYNRTS
CCCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEECCCE
IRFQPDGLASGTNGTLKYCPSSPTSPYSRGIVVNQAGRARLSTDANIRCG
EEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCEEECCCCCEEEC
>Mature Secondary Structure
MKTLPHGFSLIELITTVSISTILLSIGAPSLSDFNTRFRADSNIKVIQQTLMLARNHAIS
CCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCEEE
FNRKVTVCALSNNQCTSNWQLGLTVFIDVNSNSQLDGNETTIFTTNAFNASDIVIYNRTS
CCCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCEEEEECCCE
IRFQPDGLASGTNGTLKYCPSSPTSPYSRGIVVNQAGRARLSTDANIRCG
EEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCEEECCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA