| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921555
Identifier: 117921555
GI number: 117921555
Start: 3740245
End: 3741234
Strand: Reverse
Name: 117921555
Synonym: Shewana3_3117
Alternate gene names: NA
Gene position: 3741234-3740245 (Counterclockwise)
Preceding gene: 117921557
Following gene: 117921554
Centisome position: 75.24
GC content: 50.0
Gene sequence:
>990_bases ATGGTTATTCATATTGCTACACTGCTTGGCAGCGTAGTAACGACTCTCGCTAAACGTTTGTTGATGCTCATCCTTGGATT CTGGGCGAACGCTATGGTTTGTGCTTTCAGTTTCATTGCGATAGCCGCAGTGGCATCCGCGTCGTTTATGCTTGCAAATG CCGCCTATGCGGCTGGCACTTCTTCGGCAAGCAATCCCGCTCCCATCAAGATAGTGACCACCATCCAACAGCAATGGCAG TTTAATCTCCTCAAAGAGGCGCTGCGCCGCTCTGGTCAGTCCTATCAGGTCGAGCAAATGTCGACGCAGATGAACCAAAA ACGTAAGGTCGAAGAAGCGCTGGCTGGTACAGTCGATGTTTTTTGGAGCATGACTTCCAAGGAGCTTGAGGAAACCGTGC TCCCGGTTCGTATCCCCTTGTTTAAGGGATTACTCGGTAACCGCCTGTTAATTATCCGCAAAACGGATGAGGCCAGATTT GCCAATGTAAAAACGCTGGCGGATTTTAAGCAATTAAAAGCGGGACAAAACCGCTATTGGCCCGATGCCAGCATCCTCGA AGCCAATGGTTTGCCTGTCGTGACTAGCTATCAATACACCAATCTCTATCCGATGTTAGAGGGCGGCCGATTCGATTACC TCGCCCTCGGCGCACAGGAAATTGGCGATGAGCTCGCAAGCCACCCCGATCCCGCGCTGAAAATCGATACTCACATCCTG CTGCAATATCGATCGCCGGCATATTTTTTTGTGTCCCCAAAACGTCCCGAGTTAGCGGCGGCAATCTTAGCGGGGCTCGA AAATATGATAAGCGACGGCAGCTTCGACGAGATGTTTAATCGCGAGCTTAAGATAGACAAGCTCTACCGTGATGCCCAGT TTGAGCAGCGCGTCATTATTCGTCTCGATACGCCCGATTTAAGTCCCTTAACCCCCATTGAACGCCAAGAGTTGTGGTTA GATCTATTTAGTATGCAAGGTGCAAAATAA
Upstream 100 bases:
>100_bases TTTAGGTAGAGCGACCTTGCTTAGGATAAGCAGACAAGTTAGCGGCATTAAAAAATAAAACTCGCTGGATATTCCAGTCA TAAAAAAGAGGCTGCGATTC
Downstream 100 bases:
>100_bases TGAAAACATTAGCCTTAAAAGTACAAATTGGGTTAGCAGCTGCGATATTTATGATAGTCAGCGTGCTATTTGGGGTGTCC TATTGGTTGGCGAGCGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MVIHIATLLGSVVTTLAKRLLMLILGFWANAMVCAFSFIAIAAVASASFMLANAAYAAGTSSASNPAPIKIVTTIQQQWQ FNLLKEALRRSGQSYQVEQMSTQMNQKRKVEEALAGTVDVFWSMTSKELEETVLPVRIPLFKGLLGNRLLIIRKTDEARF ANVKTLADFKQLKAGQNRYWPDASILEANGLPVVTSYQYTNLYPMLEGGRFDYLALGAQEIGDELASHPDPALKIDTHIL LQYRSPAYFFVSPKRPELAAAILAGLENMISDGSFDEMFNRELKIDKLYRDAQFEQRVIIRLDTPDLSPLTPIERQELWL DLFSMQGAK
Sequences:
>Translated_329_residues MVIHIATLLGSVVTTLAKRLLMLILGFWANAMVCAFSFIAIAAVASASFMLANAAYAAGTSSASNPAPIKIVTTIQQQWQ FNLLKEALRRSGQSYQVEQMSTQMNQKRKVEEALAGTVDVFWSMTSKELEETVLPVRIPLFKGLLGNRLLIIRKTDEARF ANVKTLADFKQLKAGQNRYWPDASILEANGLPVVTSYQYTNLYPMLEGGRFDYLALGAQEIGDELASHPDPALKIDTHIL LQYRSPAYFFVSPKRPELAAAILAGLENMISDGSFDEMFNRELKIDKLYRDAQFEQRVIIRLDTPDLSPLTPIERQELWL DLFSMQGAK >Mature_329_residues MVIHIATLLGSVVTTLAKRLLMLILGFWANAMVCAFSFIAIAAVASASFMLANAAYAAGTSSASNPAPIKIVTTIQQQWQ FNLLKEALRRSGQSYQVEQMSTQMNQKRKVEEALAGTVDVFWSMTSKELEETVLPVRIPLFKGLLGNRLLIIRKTDEARF ANVKTLADFKQLKAGQNRYWPDASILEANGLPVVTSYQYTNLYPMLEGGRFDYLALGAQEIGDELASHPDPALKIDTHIL LQYRSPAYFFVSPKRPELAAAILAGLENMISDGSFDEMFNRELKIDKLYRDAQFEQRVIIRLDTPDLSPLTPIERQELWL DLFSMQGAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36816; Mature: 36816
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIHIATLLGSVVTTLAKRLLMLILGFWANAMVCAFSFIAIAAVASASFMLANAAYAAGT CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSASNPAPIKIVTTIQQQWQFNLLKEALRRSGQSYQVEQMSTQMNQKRKVEEALAGTVDV CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH FWSMTSKELEETVLPVRIPLFKGLLGNRLLIIRKTDEARFANVKTLADFKQLKAGQNRYW HHHHHHHHHHHHHCCEEHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC PDASILEANGLPVVTSYQYTNLYPMLEGGRFDYLALGAQEIGDELASHPDPALKIDTHIL CCCCEEECCCCEEEEEEEECCEEEEECCCCEEEEECCHHHHHHHHHCCCCCCEEECEEEE LQYRSPAYFFVSPKRPELAAAILAGLENMISDGSFDEMFNRELKIDKLYRDAQFEQRVII EEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCCCEEEE RLDTPDLSPLTPIERQELWLDLFSMQGAK EECCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MVIHIATLLGSVVTTLAKRLLMLILGFWANAMVCAFSFIAIAAVASASFMLANAAYAAGT CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SSASNPAPIKIVTTIQQQWQFNLLKEALRRSGQSYQVEQMSTQMNQKRKVEEALAGTVDV CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH FWSMTSKELEETVLPVRIPLFKGLLGNRLLIIRKTDEARFANVKTLADFKQLKAGQNRYW HHHHHHHHHHHHHCCEEHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCC PDASILEANGLPVVTSYQYTNLYPMLEGGRFDYLALGAQEIGDELASHPDPALKIDTHIL CCCCEEECCCCEEEEEEEECCEEEEECCCCEEEEECCHHHHHHHHHCCCCCCEEECEEEE LQYRSPAYFFVSPKRPELAAAILAGLENMISDGSFDEMFNRELKIDKLYRDAQFEQRVII EEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCCCEEEE RLDTPDLSPLTPIERQELWLDLFSMQGAK EECCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA