Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117921549

Identifier: 117921549

GI number: 117921549

Start: 3731226

End: 3732413

Strand: Reverse

Name: 117921549

Synonym: Shewana3_3111

Alternate gene names: NA

Gene position: 3732413-3731226 (Counterclockwise)

Preceding gene: 117921550

Following gene: 117921548

Centisome position: 75.07

GC content: 50.76

Gene sequence:

>1188_bases
ATGAGTACGACTGCGCCGGAATCTATCACCAATACGGGCGTGAATGCTCAGGAGGCTGCCGCGAAAAAGCGTCAGTCAAA
ACCGCGGTTGATGTCCCTCGATGCCCTGCGTGGCTTCGATATGTTTTGGATTCTAGGTGGTGAAGCCCTATTTGGCGCCT
TGCTTATGTTGACGGGCTGGGCGGGCTGGCAATGGGGTGATACCCAAATGCATCATAGTGAGTGGAATGGGTTTCGCTTC
TATGATTTGATTTTTCCGCTGTTTATTTTCCTTTCCGGTGTTGCCCTTGGATTATCGCCAAAACGCTTAGATAAACTGCC
GATGCAGGAGCGTATGCCTGTGTATCGACACGGAATAAAGCGACTGTTTCTTTTGTTGTTGCTTGGCATTCTTTATAACC
ATGGTTGGGGAACCGGGGCGCCTGCCGATCCTGAAAAAGTCCGTTATGCCAGCGTATTAGGTAGAATTGCCTTTGCATGG
TTCTTCGCCGCCTTGCTGGTGTGGCATACCAGTTTACGGACCCAAGTGCTGGTGGCCTTGGGCATCTTAGTGGCCTATGG
CGCGGTGCAACTCTGGTTGCCGTTTCCTGGTGGACAGGCTGGTGTGTTATCACCGACTGAGTCAATCAATGCTTATGTGG
ATAGCCTGTTACTGCCGGGTGTGAGTTATCAAGGACGAACGCCCGATCCTGAAGGCGTGTTATCGACACTGCCCGCCGTA
GTCAACGCCTTAGCGGGTGTGTTTGTCGGTCATTTTATTGTGAAATCCCATCCTAAAGGGGAGTGGGCTAAGGTTGGCCT
CTTGAGCGTTGCCGGTGGTGTTTGTTTGGCCCTAGGCTGGTTGCTGGGTGGGGTTATTCCCGTCAATAAAGAGCTGTGGA
CCAGCTCTTTTGTGTTGGTCACTAGCGGTTGGAGCATGCTGCTGTTAGCACTATTTTATGCCCTTGTGGATGTGCTGAAA
TGGCAAAAGCTCGCCTTTATTTTTGTGGTGATAGGCACTAACGCCATCATTATTTATCTGGCCTCCAGCCTAGTGGATTG
GAAGTATATCGCCCAGAGTGTGTTCGGTGGCGTTATCGCGGTATTGCCGGAAAATGCTCAGCCCTTAGGAGCTGTGATTG
GTTTGCTCACCGTTCAATGGTTAGTGCTGTATTGGATGTATCGTCGCAACATTTTTGTGCGGATCTAA

Upstream 100 bases:

>100_bases
TCGTATTTTGATGACAGGGGCTAAGTTTTTTTATTGTACAGTCTGCATTTTGCTCAAAAGTTATAAAATAATTTAAATAA
CAATAATAAAGGATAATGGT

Downstream 100 bases:

>100_bases
CGCCGATATCTGATTTTTCTTAAAGCCACAGACTCACCTCTGTGGCTTTTTTATTTCTAGCAACCAAAGGGCGCAGAGCA
TCTTTGGTTGTAAATCAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MSTTAPESITNTGVNAQEAAAKKRQSKPRLMSLDALRGFDMFWILGGEALFGALLMLTGWAGWQWGDTQMHHSEWNGFRF
YDLIFPLFIFLSGVALGLSPKRLDKLPMQERMPVYRHGIKRLFLLLLLGILYNHGWGTGAPADPEKVRYASVLGRIAFAW
FFAALLVWHTSLRTQVLVALGILVAYGAVQLWLPFPGGQAGVLSPTESINAYVDSLLLPGVSYQGRTPDPEGVLSTLPAV
VNALAGVFVGHFIVKSHPKGEWAKVGLLSVAGGVCLALGWLLGGVIPVNKELWTSSFVLVTSGWSMLLLALFYALVDVLK
WQKLAFIFVVIGTNAIIIYLASSLVDWKYIAQSVFGGVIAVLPENAQPLGAVIGLLTVQWLVLYWMYRRNIFVRI

Sequences:

>Translated_395_residues
MSTTAPESITNTGVNAQEAAAKKRQSKPRLMSLDALRGFDMFWILGGEALFGALLMLTGWAGWQWGDTQMHHSEWNGFRF
YDLIFPLFIFLSGVALGLSPKRLDKLPMQERMPVYRHGIKRLFLLLLLGILYNHGWGTGAPADPEKVRYASVLGRIAFAW
FFAALLVWHTSLRTQVLVALGILVAYGAVQLWLPFPGGQAGVLSPTESINAYVDSLLLPGVSYQGRTPDPEGVLSTLPAV
VNALAGVFVGHFIVKSHPKGEWAKVGLLSVAGGVCLALGWLLGGVIPVNKELWTSSFVLVTSGWSMLLLALFYALVDVLK
WQKLAFIFVVIGTNAIIIYLASSLVDWKYIAQSVFGGVIAVLPENAQPLGAVIGLLTVQWLVLYWMYRRNIFVRI
>Mature_394_residues
STTAPESITNTGVNAQEAAAKKRQSKPRLMSLDALRGFDMFWILGGEALFGALLMLTGWAGWQWGDTQMHHSEWNGFRFY
DLIFPLFIFLSGVALGLSPKRLDKLPMQERMPVYRHGIKRLFLLLLLGILYNHGWGTGAPADPEKVRYASVLGRIAFAWF
FAALLVWHTSLRTQVLVALGILVAYGAVQLWLPFPGGQAGVLSPTESINAYVDSLLLPGVSYQGRTPDPEGVLSTLPAVV
NALAGVFVGHFIVKSHPKGEWAKVGLLSVAGGVCLALGWLLGGVIPVNKELWTSSFVLVTSGWSMLLLALFYALVDVLKW
QKLAFIFVVIGTNAIIIYLASSLVDWKYIAQSVFGGVIAVLPENAQPLGAVIGLLTVQWLVLYWMYRRNIFVRI

Specific function: Unknown

COG id: COG4299

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI150378452, Length=450, Percent_Identity=26.6666666666667, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24639786, Length=377, Percent_Identity=28.3819628647215, Blast_Score=96, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43416; Mature: 43285

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTTAPESITNTGVNAQEAAAKKRQSKPRLMSLDALRGFDMFWILGGEALFGALLMLTGW
CCCCCCCHHHCCCCCHHHHHHHHHCCCCCCEEHHHHCCCCEEEEECCHHHHHHHHHHHCC
AGWQWGDTQMHHSEWNGFRFYDLIFPLFIFLSGVALGLSPKRLDKLPMQERMPVYRHGIK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHH
RLFLLLLLGILYNHGWGTGAPADPEKVRYASVLGRIAFAWFFAALLVWHTSLRTQVLVAL
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILVAYGAVQLWLPFPGGQAGVLSPTESINAYVDSLLLPGVSYQGRTPDPEGVLSTLPAV
HHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
VNALAGVFVGHFIVKSHPKGEWAKVGLLSVAGGVCLALGWLLGGVIPVNKELWTSSFVLV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEE
TSGWSMLLLALFYALVDVLKWQKLAFIFVVIGTNAIIIYLASSLVDWKYIAQSVFGGVIA
ECCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
VLPENAQPLGAVIGLLTVQWLVLYWMYRRNIFVRI
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEC
>Mature Secondary Structure 
STTAPESITNTGVNAQEAAAKKRQSKPRLMSLDALRGFDMFWILGGEALFGALLMLTGW
CCCCCCHHHCCCCCHHHHHHHHHCCCCCCEEHHHHCCCCEEEEECCHHHHHHHHHHHCC
AGWQWGDTQMHHSEWNGFRFYDLIFPLFIFLSGVALGLSPKRLDKLPMQERMPVYRHGIK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHCCCHHHHHHH
RLFLLLLLGILYNHGWGTGAPADPEKVRYASVLGRIAFAWFFAALLVWHTSLRTQVLVAL
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GILVAYGAVQLWLPFPGGQAGVLSPTESINAYVDSLLLPGVSYQGRTPDPEGVLSTLPAV
HHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
VNALAGVFVGHFIVKSHPKGEWAKVGLLSVAGGVCLALGWLLGGVIPVNKELWTSSFVLV
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEE
TSGWSMLLLALFYALVDVLKWQKLAFIFVVIGTNAIIIYLASSLVDWKYIAQSVFGGVIA
ECCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCEEE
VLPENAQPLGAVIGLLTVQWLVLYWMYRRNIFVRI
EECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA