Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921494

Identifier: 117921494

GI number: 117921494

Start: 3663115

End: 3663606

Strand: Direct

Name: 117921494

Synonym: Shewana3_3056

Alternate gene names: NA

Gene position: 3663115-3663606 (Clockwise)

Preceding gene: 117921493

Following gene: 117921495

Centisome position: 73.67

GC content: 46.75

Gene sequence:

>492_bases
TTGCGAATATTGTGTCTTTTAGTCTGTCTTATTTGGGTTCCGGCTTTGTTTCCTGCGTCTGTACACGCTAACTCAGGGGA
AATGCCAGCAGAACAGCAGTTAGCCGTAAAATACATGAACGCGCTAACCGAGCACGACTATCAAACACTCGGCAAATTCT
ATAACCGTGATACCGTCTTCTTCGATAAAACCGCCAATCGTAAATACACGGGTGGGCGGTTTATTATCGATTTCCTCGAG
CGCGCCCACGAGGGTGTGCTCGAATATGATTTCAATATCGAGCATATGTATAACGCAGGCTCCCTCGTGGTGATGATTGG
TAACTATCACTTTAAGGGACCCGGCGAGCAGTTTGGTAAACCCGGAAAAATTATTGATGTCGCCATTCCTGGGGTCACCA
GTCTTAAGCTCGATATGCGTAATCACAGGGTCACAGAGCATGTGGATCTGATTGATTACCAGACCATGTCAGACCAATTA
GCGATGCAGTAG

Upstream 100 bases:

>100_bases
CTATTTTTAGCCATGACCAGTGCCTTAATCATTCGCCTATGCGCCATCAAATGGCATTTGTCGTTACCCGCCTTTGATCT
CAAAACCAAGAGGGAATAGT

Downstream 100 bases:

>100_bases
TCACAAAATTTAGCTTTTGTTGAAACTTGAGCCCTCAAAACGAGTCGAAACCTACAATGAGTCAATACGACTGAGGTGCG
GCATTCTTTGCCCACGGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MRILCLLVCLIWVPALFPASVHANSGEMPAEQQLAVKYMNALTEHDYQTLGKFYNRDTVFFDKTANRKYTGGRFIIDFLE
RAHEGVLEYDFNIEHMYNAGSLVVMIGNYHFKGPGEQFGKPGKIIDVAIPGVTSLKLDMRNHRVTEHVDLIDYQTMSDQL
AMQ

Sequences:

>Translated_163_residues
MRILCLLVCLIWVPALFPASVHANSGEMPAEQQLAVKYMNALTEHDYQTLGKFYNRDTVFFDKTANRKYTGGRFIIDFLE
RAHEGVLEYDFNIEHMYNAGSLVVMIGNYHFKGPGEQFGKPGKIIDVAIPGVTSLKLDMRNHRVTEHVDLIDYQTMSDQL
AMQ
>Mature_163_residues
MRILCLLVCLIWVPALFPASVHANSGEMPAEQQLAVKYMNALTEHDYQTLGKFYNRDTVFFDKTANRKYTGGRFIIDFLE
RAHEGVLEYDFNIEHMYNAGSLVVMIGNYHFKGPGEQFGKPGKIIDVAIPGVTSLKLDMRNHRVTEHVDLIDYQTMSDQL
AMQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18604; Mature: 18604

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILCLLVCLIWVPALFPASVHANSGEMPAEQQLAVKYMNALTEHDYQTLGKFYNRDTVF
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
FDKTANRKYTGGRFIIDFLERAHEGVLEYDFNIEHMYNAGSLVVMIGNYHFKGPGEQFGK
EECCCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEEECCCCEEEEECCEEECCCCHHHCC
PGKIIDVAIPGVTSLKLDMRNHRVTEHVDLIDYQTMSDQLAMQ
CCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRILCLLVCLIWVPALFPASVHANSGEMPAEQQLAVKYMNALTEHDYQTLGKFYNRDTVF
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
FDKTANRKYTGGRFIIDFLERAHEGVLEYDFNIEHMYNAGSLVVMIGNYHFKGPGEQFGK
EECCCCCCCCCCHHHHHHHHHHHCCCEEECCCEEEEECCCCEEEEECCEEECCCCHHHCC
PGKIIDVAIPGVTSLKLDMRNHRVTEHVDLIDYQTMSDQLAMQ
CCCEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA