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The map label for this gene is yadS [H]

Identifier: 117921493

GI number: 117921493

Start: 3662487

End: 3663113

Strand: Direct

Name: yadS [H]

Synonym: Shewana3_3055

Alternate gene names: 117921493

Gene position: 3662487-3663113 (Clockwise)

Preceding gene: 117921492

Following gene: 117921494

Centisome position: 73.66

GC content: 52.95

Gene sequence:

>627_bases
ATGAGCCACTGGATTTACTTCTTCGATTTATGTGGCACGGCGGTATTTGCCCTTTCTGGCGCCTTAGCCGCTGGGCGTCA
CCGTATGGACCCCTTTGGCGTTATCGTGCTCGCGTCGGTAACAGCTGTGGGTGGTGGCAGTATTCGCGATGCGCTGATAG
GCGCCACGCCGGTGTTTTGGATCCGCGACCCTAACTACATCATAGTGATACTCGCCACAGTCCTAGCTTGTTTGCTGTTA
GTGCGCCGCCCCCGCAAGATGCCGCAATACACGCTACCTGTCGCCGACGCCTTAGGTTTGGCCCTATTCACAGTGATTGG
TGCTGAAAAAGCCCTCAATATGGGACTCAGTGGCATGATTGCCGTCGTGATGGGCTTGATCACGGGCGTAGGAGGAGGCA
TTATTCGAGACTTACTGTGCAGACAAATCCCTATGGTGTTACGCACAGAAATCTATGCCACGGCGTCGATTGTTGGCGGC
ATAGGTTATACCGTAAGCCTTGCCTACGGGATGGGCGAAAAAACGGCACTATTTTTAGCCATGACCAGTGCCTTAATCAT
TCGCCTATGCGCCATCAAATGGCATTTGTCGTTACCCGCCTTTGATCTCAAAACCAAGAGGGAATAG

Upstream 100 bases:

>100_bases
GTGCCAGCTTGTTACTGCTGCTCTATTCACTGATTTTATCTGTGATAGAAATTCGTATCTCTGTGGACGCGCTGAACATC
CACATCAAAGAGATGAGTAA

Downstream 100 bases:

>100_bases
TTTGCGAATATTGTGTCTTTTAGTCTGTCTTATTTGGGTTCCGGCTTTGTTTCCTGCGTCTGTACACGCTAACTCAGGGG
AAATGCCAGCAGAACAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MSHWIYFFDLCGTAVFALSGALAAGRHRMDPFGVIVLASVTAVGGGSIRDALIGATPVFWIRDPNYIIVILATVLACLLL
VRRPRKMPQYTLPVADALGLALFTVIGAEKALNMGLSGMIAVVMGLITGVGGGIIRDLLCRQIPMVLRTEIYATASIVGG
IGYTVSLAYGMGEKTALFLAMTSALIIRLCAIKWHLSLPAFDLKTKRE

Sequences:

>Translated_208_residues
MSHWIYFFDLCGTAVFALSGALAAGRHRMDPFGVIVLASVTAVGGGSIRDALIGATPVFWIRDPNYIIVILATVLACLLL
VRRPRKMPQYTLPVADALGLALFTVIGAEKALNMGLSGMIAVVMGLITGVGGGIIRDLLCRQIPMVLRTEIYATASIVGG
IGYTVSLAYGMGEKTALFLAMTSALIIRLCAIKWHLSLPAFDLKTKRE
>Mature_207_residues
SHWIYFFDLCGTAVFALSGALAAGRHRMDPFGVIVLASVTAVGGGSIRDALIGATPVFWIRDPNYIIVILATVLACLLLV
RRPRKMPQYTLPVADALGLALFTVIGAEKALNMGLSGMIAVVMGLITGVGGGIIRDLLCRQIPMVLRTEIYATASIVGGI
GYTVSLAYGMGEKTALFLAMTSALIIRLCAIKWHLSLPAFDLKTKRE

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=203, Percent_Identity=54.679802955665, Blast_Score=197, Evalue=3e-52,
Organism=Escherichia coli, GI87082304, Length=157, Percent_Identity=46.4968152866242, Blast_Score=135, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22212; Mature: 22081

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHWIYFFDLCGTAVFALSGALAAGRHRMDPFGVIVLASVTAVGGGSIRDALIGATPVFW
CCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE
IRDPNYIIVILATVLACLLLVRRPRKMPQYTLPVADALGLALFTVIGAEKALNMGLSGMI
EECCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
AVVMGLITGVGGGIIRDLLCRQIPMVLRTEIYATASIVGGIGYTVSLAYGMGEKTALFLA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
MTSALIIRLCAIKWHLSLPAFDLKTKRE
HHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SHWIYFFDLCGTAVFALSGALAAGRHRMDPFGVIVLASVTAVGGGSIRDALIGATPVFW
CCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEEE
IRDPNYIIVILATVLACLLLVRRPRKMPQYTLPVADALGLALFTVIGAEKALNMGLSGMI
EECCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH
AVVMGLITGVGGGIIRDLLCRQIPMVLRTEIYATASIVGGIGYTVSLAYGMGEKTALFLA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
MTSALIIRLCAIKWHLSLPAFDLKTKRE
HHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA