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The map label for this gene is pfpI [H]

Identifier: 117921434

GI number: 117921434

Start: 3600412

End: 3600972

Strand: Reverse

Name: pfpI [H]

Synonym: Shewana3_2995

Alternate gene names: 117921434

Gene position: 3600972-3600412 (Counterclockwise)

Preceding gene: 117921435

Following gene: 117921433

Centisome position: 72.42

GC content: 52.41

Gene sequence:

>561_bases
ATGGCCAGTATTTTGATCATCGCCGGTGATTTTGTTGAAGATTATGAGCTAATGGTACCGTTCCAAGCCCTACAAATGGT
GGGGCACAGCGTAACGGTTGTCTGCCCTGATAAAGTGGCGGGACAAACCATTAAAACGGCTATCCATGACTTTGAAGGCG
ATCAAACCTATACCGAAAAACCAGGACACTTATTTGCCCTAAATGGCAACTTTGCCGGTACCAACGCCAGTGATTTTGAT
GCGCTGCTGCTTCCCGGTGGCCGTGCGCCTGAGTATTTACGCCTAAATCCTGCGGTGATCGCCTTGGTGATGGACTTTGC
TGCCCAAGATAAACCCATAGCGGCGATTTGCCATGGCGCGCAGTTACTGACGGCGGCCGATGTGGTACGCGGTAAGAAAG
TGTCTGCCTATCCAGCTTGTGCGCCTGAGGTGAAACAAGCGGGCGCCGAGTATTGCGAGATTGAGGTGACGGCGGCAATC
ACCGATGGCAAGTTAGTCACGGCGCCCGCCTGGCCAGCGCATCCTGCATGGTTGGCGCAGTTTAACAAGTTATTGAATTA
A

Upstream 100 bases:

>100_bases
GCGCCAATTTGTAGTATTCCACTATTACCCTAAATTTAATGGTCGGAGTAGAGTGAAATCCGATGTTGCGTTTTCCCTTA
TCGAATAAAAGGAGTTTCTC

Downstream 100 bases:

>100_bases
CGATATTCATCTAACGTTATTTATGGCATAACAGTTCGGGTAGGGCTTAATACCAATCGTATTAAATATCTGTTCATTCA
GCGGGAGTAAAACGGGCTTT

Product: PfpI family intracellular peptidase

Products: NA

Alternate protein names: Intracellular protease I [H]

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MASILIIAGDFVEDYELMVPFQALQMVGHSVTVVCPDKVAGQTIKTAIHDFEGDQTYTEKPGHLFALNGNFAGTNASDFD
ALLLPGGRAPEYLRLNPAVIALVMDFAAQDKPIAAICHGAQLLTAADVVRGKKVSAYPACAPEVKQAGAEYCEIEVTAAI
TDGKLVTAPAWPAHPAWLAQFNKLLN

Sequences:

>Translated_186_residues
MASILIIAGDFVEDYELMVPFQALQMVGHSVTVVCPDKVAGQTIKTAIHDFEGDQTYTEKPGHLFALNGNFAGTNASDFD
ALLLPGGRAPEYLRLNPAVIALVMDFAAQDKPIAAICHGAQLLTAADVVRGKKVSAYPACAPEVKQAGAEYCEIEVTAAI
TDGKLVTAPAWPAHPAWLAQFNKLLN
>Mature_185_residues
ASILIIAGDFVEDYELMVPFQALQMVGHSVTVVCPDKVAGQTIKTAIHDFEGDQTYTEKPGHLFALNGNFAGTNASDFDA
LLLPGGRAPEYLRLNPAVIALVMDFAAQDKPIAAICHGAQLLTAADVVRGKKVSAYPACAPEVKQAGAEYCEIEVTAAIT
DGKLVTAPAWPAHPAWLAQFNKLLN

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain [H]

Homologues:

Organism=Escherichia coli, GI87082219, Length=183, Percent_Identity=34.4262295081967, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006286
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 19779; Mature: 19648

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASILIIAGDFVEDYELMVPFQALQMVGHSVTVVCPDKVAGQTIKTAIHDFEGDQTYTEK
CCEEEEEECCCCCCHHEECCHHHHHHCCCEEEEEECCHHCCHHHHHHHHHCCCCCCCCCC
PGHLFALNGNFAGTNASDFDALLLPGGRAPEYLRLNPAVIALVMDFAAQDKPIAAICHGA
CCEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEECHHHHHHHHHHHCCCCCCEEECCCH
QLLTAADVVRGKKVSAYPACAPEVKQAGAEYCEIEVTAAITDGKLVTAPAWPAHPAWLAQ
HHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEEECCEEEECCCCCCCHHHHHH
FNKLLN
HHHHCC
>Mature Secondary Structure 
ASILIIAGDFVEDYELMVPFQALQMVGHSVTVVCPDKVAGQTIKTAIHDFEGDQTYTEK
CEEEEEECCCCCCHHEECCHHHHHHCCCEEEEEECCHHCCHHHHHHHHHCCCCCCCCCC
PGHLFALNGNFAGTNASDFDALLLPGGRAPEYLRLNPAVIALVMDFAAQDKPIAAICHGA
CCEEEEECCCCCCCCCCCCCEEEECCCCCCCEEEECHHHHHHHHHHHCCCCCCEEECCCH
QLLTAADVVRGKKVSAYPACAPEVKQAGAEYCEIEVTAAITDGKLVTAPAWPAHPAWLAQ
HHHHHHHHHCCCCCCCCCCCCHHHHHCCCCEEEEEEEEEEECCEEEECCCCCCCHHHHHH
FNKLLN
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]