Click here to switch to the map view.

The map label for this gene is yqiK [H]

Identifier: 117921435

GI number: 117921435

Start: 3601129

End: 3602907

Strand: Reverse

Name: yqiK [H]

Synonym: Shewana3_2996

Alternate gene names: 117921435

Gene position: 3602907-3601129 (Counterclockwise)

Preceding gene: 117921436

Following gene: 117921434

Centisome position: 72.46

GC content: 49.69

Gene sequence:

>1779_bases
ATGGATGTGTTAAATGATGTAACCAGTTCGAGCAACTTCGTGTTGTTAGTTGCCGGAATGGTATTGGTTGGCCTGATTGT
GATTGGTCTGATTTTCGCCAAATTATATAAACGTGCGACGAAGGAAATGGCCTTTGTTCGTACGGGTTTTGGCGGTGAAA
AAATTATTAAGGACGGCGGCGCAATCGTCTTACCCGTGCTGCATGAAACCATAGCCGTAAATATGAATACCCTGCGTATC
GAAGTGGAGAAAACTCAAAAAGATGCGCTGATCACTAAGGATAGAATGCGCGTCGATGTGAAGGCCGACTTCTATCTGCG
TGTGGCGCCCAATGCTGAAGGCATTTCAATGGCGGCACAAACCTTAGGTACCCGTACCACGCGCGTGGAAGAGCTGAAAA
AGCTGATGGAATCTAAGTTTGTTGACGTGTTACGTGCGGTCGCGGCGGAAATGACCATGACCGAAATGCATGAGCAGCGC
GCCGATTTTGTCCAGCGGGTGCAGAATAACGTCGCTAACGATCTCGAGAAAAACGGGCTAGAGCTCGAATCCGTTTCTTT
GACGGGTTTTGACCAGACTGATCTGCAATTCTTTAATGAAAATAACGCATTCGACGCTGAAGGTCGTGCACGTTTAGCCA
AGATTATCGAAGAAAAACGTAAAGAAACCAACGATATCCAGCAGGAAAACCGCATCAAGATCGAGCAGCGTAACCTAGAG
GCTGAAAAAGAATCGCTAGAGATTGAAAAGGCCGAAGAAGAAGCGCGTCTGGTGCAGCAACAGTCGCTCGAATTTAAGCG
TGCCGAGCAAAAAGCGGAAATTATTAAGCAAAAAGAAAACAAGTCCCGTGAAGAACGCGAAGCTGAAATTGCCAAAGAGC
GTGCAATCGAAACAGCGGAAATCGAAAAGACCAAAGACATCGAAACCCGCGAGATTGAAAAGCGCAAATCCATCGAACAG
GCACGTATTCAACAGCAACGTGATATCGAAGTCGCAGAGCAGGAAAAACACATCGCGGTAGCCGCGAAGTCGGAAGAAGA
GTCTGCCGCCCGTGCCCGCGCCGCCGAAGCGGAAAAAACCAAGGTAGAGAAAGAAGAAGCGGTTATTACGGTGCGCCAAG
TGGCTGAGGCGAATCGTCGTAAAGAGATTGAAGTGATCGATGCGCGCAAAGAAGCGGAGCGCGATGCAGTGGGCGTGACA
GTGCAAGCCGAGGCGGAAAAACGTGCCGCCGAAGACAGATCGAGCGCGATTCTGATTGAAGCCCGTGCCAGTGCCGATGC
CAAAAAACTGCAAGCCGAGGCCGACGAGAAGGTCTATGCGGTAGAAGCGGCGGGTAAACAAGCTCTGTACGAAGCCGAAA
ACGTGCTGCGTGATGAGCAGATTGCGCTGCAAAAATCCCTCGCTATCTTAAAAGCACTGCCAGAGATTGTCGCGCAGGCG
GTTAAACCGCTGGAAAACATTGAAGGTATTAAAATTCTTCAAGGTTATGGCGCCGGTAATCAACTGGCATCGGGAGCAGA
TGGCGCTGTCGCGCATCAAGGCGGTATCGCCGAGCAAGTGACCAGCGCCGCGTTAAACTACCGCGCTAATGCGCCAGTGG
TGGATGCCATGCTGCGGGAGTTGGGCTTAGTGCAATCTGAGTCTGGCACCTTAAACGACCTGCTCAATGGCAATAATGCT
TTAACTACCGAAGCCTTAAATGTTGTGAAGTCGGCGAATAGCGGATTAAATGGTTATAGCCAGCAACATACAGTGATAGA
GCCAAAGATAAGTAATTGA

Upstream 100 bases:

>100_bases
CGGCACGCAAGTGGTGCTGCTAAAACGAGAAGGAAGAGTCTGGTCTGCGACTCGCTTTGATAATTAATTTTCCAAAGCCA
TTAACGAAAAAGGAAAGCAA

Downstream 100 bases:

>100_bases
TATTAATGGTTTAGATTAAAGCGCCTGCGGGCGCTTTTTTTATGCCTGAAACCGCAGCGCCAATTTGTAGTATTCCACTA
TTACCCTAAATTTAATGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 592; Mature: 592

Protein sequence:

>592_residues
MDVLNDVTSSSNFVLLVAGMVLVGLIVIGLIFAKLYKRATKEMAFVRTGFGGEKIIKDGGAIVLPVLHETIAVNMNTLRI
EVEKTQKDALITKDRMRVDVKADFYLRVAPNAEGISMAAQTLGTRTTRVEELKKLMESKFVDVLRAVAAEMTMTEMHEQR
ADFVQRVQNNVANDLEKNGLELESVSLTGFDQTDLQFFNENNAFDAEGRARLAKIIEEKRKETNDIQQENRIKIEQRNLE
AEKESLEIEKAEEEARLVQQQSLEFKRAEQKAEIIKQKENKSREEREAEIAKERAIETAEIEKTKDIETREIEKRKSIEQ
ARIQQQRDIEVAEQEKHIAVAAKSEEESAARARAAEAEKTKVEKEEAVITVRQVAEANRRKEIEVIDARKEAERDAVGVT
VQAEAEKRAAEDRSSAILIEARASADAKKLQAEADEKVYAVEAAGKQALYEAENVLRDEQIALQKSLAILKALPEIVAQA
VKPLENIEGIKILQGYGAGNQLASGADGAVAHQGGIAEQVTSAALNYRANAPVVDAMLRELGLVQSESGTLNDLLNGNNA
LTTEALNVVKSANSGLNGYSQQHTVIEPKISN

Sequences:

>Translated_592_residues
MDVLNDVTSSSNFVLLVAGMVLVGLIVIGLIFAKLYKRATKEMAFVRTGFGGEKIIKDGGAIVLPVLHETIAVNMNTLRI
EVEKTQKDALITKDRMRVDVKADFYLRVAPNAEGISMAAQTLGTRTTRVEELKKLMESKFVDVLRAVAAEMTMTEMHEQR
ADFVQRVQNNVANDLEKNGLELESVSLTGFDQTDLQFFNENNAFDAEGRARLAKIIEEKRKETNDIQQENRIKIEQRNLE
AEKESLEIEKAEEEARLVQQQSLEFKRAEQKAEIIKQKENKSREEREAEIAKERAIETAEIEKTKDIETREIEKRKSIEQ
ARIQQQRDIEVAEQEKHIAVAAKSEEESAARARAAEAEKTKVEKEEAVITVRQVAEANRRKEIEVIDARKEAERDAVGVT
VQAEAEKRAAEDRSSAILIEARASADAKKLQAEADEKVYAVEAAGKQALYEAENVLRDEQIALQKSLAILKALPEIVAQA
VKPLENIEGIKILQGYGAGNQLASGADGAVAHQGGIAEQVTSAALNYRANAPVVDAMLRELGLVQSESGTLNDLLNGNNA
LTTEALNVVKSANSGLNGYSQQHTVIEPKISN
>Mature_592_residues
MDVLNDVTSSSNFVLLVAGMVLVGLIVIGLIFAKLYKRATKEMAFVRTGFGGEKIIKDGGAIVLPVLHETIAVNMNTLRI
EVEKTQKDALITKDRMRVDVKADFYLRVAPNAEGISMAAQTLGTRTTRVEELKKLMESKFVDVLRAVAAEMTMTEMHEQR
ADFVQRVQNNVANDLEKNGLELESVSLTGFDQTDLQFFNENNAFDAEGRARLAKIIEEKRKETNDIQQENRIKIEQRNLE
AEKESLEIEKAEEEARLVQQQSLEFKRAEQKAEIIKQKENKSREEREAEIAKERAIETAEIEKTKDIETREIEKRKSIEQ
ARIQQQRDIEVAEQEKHIAVAAKSEEESAARARAAEAEKTKVEKEEAVITVRQVAEANRRKEIEVIDARKEAERDAVGVT
VQAEAEKRAAEDRSSAILIEARASADAKKLQAEADEKVYAVEAAGKQALYEAENVLRDEQIALQKSLAILKALPEIVAQA
VKPLENIEGIKILQGYGAGNQLASGADGAVAHQGGIAEQVTSAALNYRANAPVVDAMLRELGLVQSESGTLNDLLNGNNA
LTTEALNVVKSANSGLNGYSQQHTVIEPKISN

Specific function: Unknown

COG id: COG2268

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yuaG and Synechocystis PCC 6803 sll1021 [H]

Homologues:

Organism=Escherichia coli, GI1789430, Length=542, Percent_Identity=45.9409594095941, Blast_Score=432, Evalue=1e-122,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 65534; Mature: 65534

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVLNDVTSSSNFVLLVAGMVLVGLIVIGLIFAKLYKRATKEMAFVRTGFGGEKIIKDGG
CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
AIVLPVLHETIAVNMNTLRIEVEKTQKDALITKDRMRVDVKADFYLRVAPNAEGISMAAQ
CEEEHHHHHHHHEECEEEEEEEECCCCCHHEECCCEEEEEEEEEEEEECCCCCHHHHHHH
TLGTRTTRVEELKKLMESKFVDVLRAVAAEMTMTEMHEQRADFVQRVQNNVANDLEKNGL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ELESVSLTGFDQTDLQFFNENNAFDAEGRARLAKIIEEKRKETNDIQQENRIKIEQRNLE
EEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCH
AEKESLEIEKAEEEARLVQQQSLEFKRAEQKAEIIKQKENKSREEREAEIAKERAIETAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH
IEKTKDIETREIEKRKSIEQARIQQQRDIEVAEQEKHIAVAAKSEEESAARARAAEAEKT
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEECCCHHHHHHHHHHHHHHH
KVEKEEAVITVRQVAEANRRKEIEVIDARKEAERDAVGVTVQAEAEKRAAEDRSSAILIE
HHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCEEEECCHHHHHHCCCCCEEEEE
ARASADAKKLQAEADEKVYAVEAAGKQALYEAENVLRDEQIALQKSLAILKALPEIVAQA
ECCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKPLENIEGIKILQGYGAGNQLASGADGAVAHQGGIAEQVTSAALNYRANAPVVDAMLRE
HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
LGLVQSESGTLNDLLNGNNALTTEALNVVKSANSGLNGYSQQHTVIEPKISN
HCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MDVLNDVTSSSNFVLLVAGMVLVGLIVIGLIFAKLYKRATKEMAFVRTGFGGEKIIKDGG
CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
AIVLPVLHETIAVNMNTLRIEVEKTQKDALITKDRMRVDVKADFYLRVAPNAEGISMAAQ
CEEEHHHHHHHHEECEEEEEEEECCCCCHHEECCCEEEEEEEEEEEEECCCCCHHHHHHH
TLGTRTTRVEELKKLMESKFVDVLRAVAAEMTMTEMHEQRADFVQRVQNNVANDLEKNGL
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ELESVSLTGFDQTDLQFFNENNAFDAEGRARLAKIIEEKRKETNDIQQENRIKIEQRNLE
EEEEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHCCH
AEKESLEIEKAEEEARLVQQQSLEFKRAEQKAEIIKQKENKSREEREAEIAKERAIETAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHH
IEKTKDIETREIEKRKSIEQARIQQQRDIEVAEQEKHIAVAAKSEEESAARARAAEAEKT
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEECCCHHHHHHHHHHHHHHH
KVEKEEAVITVRQVAEANRRKEIEVIDARKEAERDAVGVTVQAEAEKRAAEDRSSAILIE
HHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCEEEECCHHHHHHCCCCCEEEEE
ARASADAKKLQAEADEKVYAVEAAGKQALYEAENVLRDEQIALQKSLAILKALPEIVAQA
ECCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKPLENIEGIKILQGYGAGNQLASGADGAVAHQGGIAEQVTSAALNYRANAPVVDAMLRE
HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
LGLVQSESGTLNDLLNGNNALTTEALNVVKSANSGLNGYSQQHTVIEPKISN
HCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]