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The map label for this gene is atoE [H]

Identifier: 117921421

GI number: 117921421

Start: 3582424

End: 3583752

Strand: Reverse

Name: atoE [H]

Synonym: Shewana3_2982

Alternate gene names: 117921421

Gene position: 3583752-3582424 (Counterclockwise)

Preceding gene: 117921423

Following gene: 117921419

Centisome position: 72.08

GC content: 52.37

Gene sequence:

>1329_bases
ATGTTAACCAAAGCGGCAAAACCTCTGGTCAAACTCGTCGACCGTTATTTACCCGACCCTTATATCTTTGTCTTGCTCTT
AACCTTAGTGGTGTTGATTTCGGCCGTGGTGGCTGAGCAGAAAACCCCACTCGAAGTCATCAATTACTGGGGCGATGGCT
TTTGGGCACTGCTGAGTTTTTCGATGCAGATGCTATTAGTGCTGGTGGCGGGATTTATGCTCGCCAGCTCGCCACCGATT
AAGAAATTACTCGATGGCATCGCTGGATTCGCTAAGTCGGCGCCACAGGCGATTATCTTAGTAACACTGGTTTCACTCGC
CGCCAGTTGGATTAACTGGGGATTTGGTTTAGTGGTCGGCGCCTTATTCGCGAAGGCCTTAGCGCGTAAAGTGCGTGTGG
ATTACCGTTTATTGGTCGCCAGTGCTTACTCGGGATTTGTGGTTTGGCATGGCGGCTTAGCGGGCTCGATTCCGCTAACC
ATTGCCACGGCGGGGCATTTCTCTGAATCACAAATCGGCATCATCCCCACCAGCGAGACCATCTTCGCGAGCTTTAACCT
GCTGTTAGTGCTGATTTTGTTTGTGGTGATGCCTCTGGTAAACCGCTTTATGCTGCCCGAAGAGAAAGACGGTATCTATG
TCGATCCTAAGGCTCTTGAGGATGGGGCCGCAGACGATAACGCGGCGCAGTTAACGGCCAATACGACTCGCCCTGCGGAT
AAATTAGAAAACAGTCGCTTGCTCGGTTGGAGCGTGGGCGGCGCGGGACTCGTTTACTTAGGCTACTACTTTGCTGTGCA
GGGCGGCAGCTTAAACCTTAACCTAGTCAACTTCTTATTTTTATTCCTCGCCATCGTGCTGCATCAAACGCCACGCAGTC
TATTGCTGAGTCTCAACGAAGCCATTAAAGGCGGCGCGGGTATCGTTATCCAGTTTCCTTTTTACGCAGGGATTATGGCG
GTGATGGTGCAATCGGGATTAGCCCAGAGTATTTCCGAAGGTTTTGTGGCCATCGCCAGTGCCGAAAGTCTGCCATTTTG
GAGCTTTATCAGTGCCGGGATTGTGAATATTTTCGTGCCTTCTGGGGGCGGACAATGGGCGGTGCAGGCGCCGATTATGT
TGCCTGCGGCCGAAGCCTTGGGCGCCGATGTGGCACGTGTTGCTATGGCCGTAGCTTGGGGAGATGCGTGGACCAATCTT
ATCCAGCCTTTCTGGGCGCTGCCTGTGCTGGCCATCGCCGGGTTAAAGGCGCGGGATATCATGGGGTTTTGTTTAATGCA
GCTGCTGATAACCGGGGTGATTATCAGTATCGCCCTAAGCTGGTTTTAA

Upstream 100 bases:

>100_bases
CTAAAGGCTTTATCCCGTTTTAGAGATCGCTTAACCTGTGGCATTAGACTCTACAAAAACTCAATAAAAACAGATAAGAA
GAATAAACAAGGACAGTCTT

Downstream 100 bases:

>100_bases
ACGAAAGCTTACGGTTTTTGATAAAGGGCAATCTCACTTGCCCTTTATTTTTATGCACTTTTTATTCTCTTCTTTATCCA
GTTCATGCCCAAATATGTAA

Product: short chain fatty acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MLTKAAKPLVKLVDRYLPDPYIFVLLLTLVVLISAVVAEQKTPLEVINYWGDGFWALLSFSMQMLLVLVAGFMLASSPPI
KKLLDGIAGFAKSAPQAIILVTLVSLAASWINWGFGLVVGALFAKALARKVRVDYRLLVASAYSGFVVWHGGLAGSIPLT
IATAGHFSESQIGIIPTSETIFASFNLLLVLILFVVMPLVNRFMLPEEKDGIYVDPKALEDGAADDNAAQLTANTTRPAD
KLENSRLLGWSVGGAGLVYLGYYFAVQGGSLNLNLVNFLFLFLAIVLHQTPRSLLLSLNEAIKGGAGIVIQFPFYAGIMA
VMVQSGLAQSISEGFVAIASAESLPFWSFISAGIVNIFVPSGGGQWAVQAPIMLPAAEALGADVARVAMAVAWGDAWTNL
IQPFWALPVLAIAGLKARDIMGFCLMQLLITGVIISIALSWF

Sequences:

>Translated_442_residues
MLTKAAKPLVKLVDRYLPDPYIFVLLLTLVVLISAVVAEQKTPLEVINYWGDGFWALLSFSMQMLLVLVAGFMLASSPPI
KKLLDGIAGFAKSAPQAIILVTLVSLAASWINWGFGLVVGALFAKALARKVRVDYRLLVASAYSGFVVWHGGLAGSIPLT
IATAGHFSESQIGIIPTSETIFASFNLLLVLILFVVMPLVNRFMLPEEKDGIYVDPKALEDGAADDNAAQLTANTTRPAD
KLENSRLLGWSVGGAGLVYLGYYFAVQGGSLNLNLVNFLFLFLAIVLHQTPRSLLLSLNEAIKGGAGIVIQFPFYAGIMA
VMVQSGLAQSISEGFVAIASAESLPFWSFISAGIVNIFVPSGGGQWAVQAPIMLPAAEALGADVARVAMAVAWGDAWTNL
IQPFWALPVLAIAGLKARDIMGFCLMQLLITGVIISIALSWF
>Mature_442_residues
MLTKAAKPLVKLVDRYLPDPYIFVLLLTLVVLISAVVAEQKTPLEVINYWGDGFWALLSFSMQMLLVLVAGFMLASSPPI
KKLLDGIAGFAKSAPQAIILVTLVSLAASWINWGFGLVVGALFAKALARKVRVDYRLLVASAYSGFVVWHGGLAGSIPLT
IATAGHFSESQIGIIPTSETIFASFNLLLVLILFVVMPLVNRFMLPEEKDGIYVDPKALEDGAADDNAAQLTANTTRPAD
KLENSRLLGWSVGGAGLVYLGYYFAVQGGSLNLNLVNFLFLFLAIVLHQTPRSLLLSLNEAIKGGAGIVIQFPFYAGIMA
VMVQSGLAQSISEGFVAIASAESLPFWSFISAGIVNIFVPSGGGQWAVQAPIMLPAAEALGADVARVAMAVAWGDAWTNL
IQPFWALPVLAIAGLKARDIMGFCLMQLLITGVIISIALSWF

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=443, Percent_Identity=45.5981941309255, Blast_Score=409, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 47219; Mature: 47219

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTKAAKPLVKLVDRYLPDPYIFVLLLTLVVLISAVVAEQKTPLEVINYWGDGFWALLSF
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHH
SMQMLLVLVAGFMLASSPPIKKLLDGIAGFAKSAPQAIILVTLVSLAASWINWGFGLVVG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALFAKALARKVRVDYRLLVASAYSGFVVWHGGLAGSIPLTIATAGHFSESQIGIIPTSET
HHHHHHHHHHHHHHHHHEEHHCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEECCCHH
IFASFNLLLVLILFVVMPLVNRFMLPEEKDGIYVDPKALEDGAADDNAAQLTANTTRPAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHCCCCCCCCCCCEEEECCCCCHH
KLENSRLLGWSVGGAGLVYLGYYFAVQGGSLNLNLVNFLFLFLAIVLHQTPRSLLLSLNE
HHCCCEEEEEECCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AIKGGAGIVIQFPFYAGIMAVMVQSGLAQSISEGFVAIASAESLPFWSFISAGIVNIFVP
HHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHCCEEEEEEE
SGGGQWAVQAPIMLPAAEALGADVARVAMAVAWGDAWTNLIQPFWALPVLAIAGLKARDI
CCCCCEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
MGFCLMQLLITGVIISIALSWF
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTKAAKPLVKLVDRYLPDPYIFVLLLTLVVLISAVVAEQKTPLEVINYWGDGFWALLSF
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHH
SMQMLLVLVAGFMLASSPPIKKLLDGIAGFAKSAPQAIILVTLVSLAASWINWGFGLVVG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ALFAKALARKVRVDYRLLVASAYSGFVVWHGGLAGSIPLTIATAGHFSESQIGIIPTSET
HHHHHHHHHHHHHHHHHEEHHCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEECCCHH
IFASFNLLLVLILFVVMPLVNRFMLPEEKDGIYVDPKALEDGAADDNAAQLTANTTRPAD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHCCCCCCCCCCCEEEECCCCCHH
KLENSRLLGWSVGGAGLVYLGYYFAVQGGSLNLNLVNFLFLFLAIVLHQTPRSLLLSLNE
HHCCCEEEEEECCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AIKGGAGIVIQFPFYAGIMAVMVQSGLAQSISEGFVAIASAESLPFWSFISAGIVNIFVP
HHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHCCEEEEEEE
SGGGQWAVQAPIMLPAAEALGADVARVAMAVAWGDAWTNLIQPFWALPVLAIAGLKARDI
CCCCCEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
MGFCLMQLLITGVIISIALSWF
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]