| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921365
Identifier: 117921365
GI number: 117921365
Start: 3506206
End: 3506727
Strand: Reverse
Name: 117921365
Synonym: Shewana3_2925
Alternate gene names: NA
Gene position: 3506727-3506206 (Counterclockwise)
Preceding gene: 117921367
Following gene: 117921363
Centisome position: 70.53
GC content: 46.36
Gene sequence:
>522_bases ATGAAGTTACAGCAAGTAGATAAAACGGTTTACCGTAGCAATATGAACCTGTTTATGGTGGCCTTAGTGCTGGGGCTGAT AGTTTTGTCCTTAAGTTTTGGGGCGGGATTGATTGCGCTCTTTGGTGTCGAGGCTGTGCCCGGTGAGCCGACGGGGAATT TCCATTGGAACCTACTCGGGGTGATTTTGGCGGTGTTACTCTGTAGCGCCATAGTGTATCAGCTTAAGAGTAAACCCTTC TTTAGAGAGATTTATTACGTCTGGCAGTTAAAGCAGCTGCAAAATCGCATTTATCGTAAGCTGAGTAAAATTCGGGCCGC GGCGGCGGATAATGATGTAAAAGCCTTGATTACGTTGCTGTTTTACTTCACCAGTTTACGCCAAGTCTATCTGCTGGATG ATAATACTTTGACCTTATCCAGCGTCGATAAGGAGTTAAACCAACTGCAAGAGCAGTGCAACGCCTTGGAGTTAACGCTC TCGGCCGAGCAATTTGAAGTAGCGCTGTTAGCGGGTTTTTAG
Upstream 100 bases:
>100_bases AAGTTTGATAGCGGGTTTAGGATGTTGATATTCAGGCAGGCTCAAGCAAACTGAGTTATGCTGCGCCGCCAATAGGTATT TTTCGATAAGAAGTGAGCCA
Downstream 100 bases:
>100_bases TGGCATTTGTGCCAAGAACCCAATAAAAAAAGTGAGTGCCTACGCACTCACTTTTTTCGAACTTACTTTTTAGAAATCAC TCTTTAGATAAGTCTATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MKLQQVDKTVYRSNMNLFMVALVLGLIVLSLSFGAGLIALFGVEAVPGEPTGNFHWNLLGVILAVLLCSAIVYQLKSKPF FREIYYVWQLKQLQNRIYRKLSKIRAAAADNDVKALITLLFYFTSLRQVYLLDDNTLTLSSVDKELNQLQEQCNALELTL SAEQFEVALLAGF
Sequences:
>Translated_173_residues MKLQQVDKTVYRSNMNLFMVALVLGLIVLSLSFGAGLIALFGVEAVPGEPTGNFHWNLLGVILAVLLCSAIVYQLKSKPF FREIYYVWQLKQLQNRIYRKLSKIRAAAADNDVKALITLLFYFTSLRQVYLLDDNTLTLSSVDKELNQLQEQCNALELTL SAEQFEVALLAGF >Mature_173_residues MKLQQVDKTVYRSNMNLFMVALVLGLIVLSLSFGAGLIALFGVEAVPGEPTGNFHWNLLGVILAVLLCSAIVYQLKSKPF FREIYYVWQLKQLQNRIYRKLSKIRAAAADNDVKALITLLFYFTSLRQVYLLDDNTLTLSSVDKELNQLQEQCNALELTL SAEQFEVALLAGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19511; Mature: 19511
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLQQVDKTVYRSNMNLFMVALVLGLIVLSLSFGAGLIALFGVEAVPGEPTGNFHWNLLG CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHH VILAVLLCSAIVYQLKSKPFFREIYYVWQLKQLQNRIYRKLSKIRAAAADNDVKALITLL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FYFTSLRQVYLLDDNTLTLSSVDKELNQLQEQCNALELTLSAEQFEVALLAGF HHHHHHHEEEEECCCEEEHHHHHHHHHHHHHHHHHHEEEECHHHHHEEEEECC >Mature Secondary Structure MKLQQVDKTVYRSNMNLFMVALVLGLIVLSLSFGAGLIALFGVEAVPGEPTGNFHWNLLG CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCHHHHHH VILAVLLCSAIVYQLKSKPFFREIYYVWQLKQLQNRIYRKLSKIRAAAADNDVKALITLL HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH FYFTSLRQVYLLDDNTLTLSSVDKELNQLQEQCNALELTLSAEQFEVALLAGF HHHHHHHEEEEECCCEEEHHHHHHHHHHHHHHHHHHEEEECHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA