Click here to switch to the map view.

The map label for this gene is 117921355

Identifier: 117921355

GI number: 117921355

Start: 3490175

End: 3491653

Strand: Direct

Name: 117921355

Synonym: Shewana3_2915

Alternate gene names: NA

Gene position: 3490175-3491653 (Clockwise)

Preceding gene: 117921354

Following gene: 117921356

Centisome position: 70.19

GC content: 46.52

Gene sequence:

>1479_bases
ATGTGTACGCGGAAGGTTAGTTTGTCATCAGTAAAAGTCAGAGCGACGATTGTAGAGGACAATGCGGGCATCAAAAGCCA
ACTGCCTATCTTACTAACTGAGCAAGGAGAGTTAAGTACGGTCACGGACTACCTACTCAAGCTAGAGGCGGACGGTGTGA
GTAACTCCGTCATGAATGGATTTCTTCAAGCGGTGTCCTTGTTGCTGGATTATATGGAAGCAAATAGAGGATTGTTTGAC
GATCCGAAGTTGCTCTTCCAGACCTTTTCTAAGCGGTTGTATACAGGAACGATTGGTGAAGATGGACTTGACCCATCAGG
TTTATATTGGGTGCCAAGTTCAACCAGTAACGTGAATAAGCATATTCATCGATTGACGGCATTCACAGATTGGTTGGCAA
ACAAGCACGGCACTGCGTCCATGAATCCCTTGCGTGATGCAACCCCGCATGAGCAGCGACTGAATTACGCTGCATGGTAT
CGCAAAAACCAAAACGATTTCCTTGGTCATATCGAAGATAAGACCGTCAATAAAACCATCCGTAAAGCGCGAACCATTAA
GGGACGCACACCTCTCACCAAAACCGAAGATGACGCTATCGCCTTTCCTGAAAAGCATTGGGAAGATTTTTATTTGAACG
GTATTGGTGGCGCAAGCGATCCACGAGTGGCACTCAGGGACAAATTAATACTCCTGCTCATGCACGGTGGCGGGCTCCGC
GAAAGCGAGGCTTTAACCCTTTGGGTGACAGATGTGTTTGAAGATCCCTATAACCCAGATAGTGCAATCGTTCGAATTTA
CAATGAAGTCGATGGCAAAGCGCCAAATGACCCTGAAGTTCGTTCTAAAAATCAAAATAGAGAAACATACTTAAAAGAAA
AGTATGCGCGTATCCCACGCCAGCGCATGAAAGGCACCGCACATCTCGGTTGGAAGAACCGTGTGGTTGACCATAAAGAT
AACTACATACAAGTTCAGTGGTTCCCAACCGACTACGGCAAAGTGTTTATGTCACTTTGGAAAAACTATCAAAAGTACCG
TGCCAGCATCGACTGTCACCACCCTTATGCGTTTATTTCTTTTCATCACAGTGCCTTCGGCAACCCTTACACCATCAACG
CTTTCCATGATAACTACGCCAACGGCTTGAAGCGTATCGGTTTGGAGCCAAGCAAGGCAGAAGGTAAAGACCCTCACGGG
CATCGTCATAATTACGGTAGACGATTAGAACGTTCAGGGTTGAACCCGTTGGTGATTCGACGCTGTATGCACCATAAGTC
CTTAGATTCACAAATCCCCTACACAGGTAAAGGTCAGCAGGAAATCTCTGACGAACTCACCCAAGCCACACTGCAACTGG
CAAATCCTGAATCCAAAGTCAAAGCACTCGACTGGAAAGCACTGGTTGGGCATGGTTTTGATGACATCGACCCACAGGGT
TACTTCACAGGCAAGCATCCAAAATTGAGAGGCAAATAA

Upstream 100 bases:

>100_bases
ATATAGTAACTTAAAAGGTGTATATTGTGTATTAAGGCAGAAGAATCTGCCTTTTTATTGACTGAGATTCCAGTTAGGAC
TATAGTGTATTATATGTTTA

Downstream 100 bases:

>100_bases
TGGGGCGAACTAAAGGTAAAAAAGCGGACGGACGCACATCGGATTTAACCTTCTCTTGGATGCTCACCACGCTCGGTGCG
GAGTGGCAGCAATGGCAGGA

Product: phage integrase family protein

Products: NA

Alternate protein names: Phage Integrase; Integrase Family Protein; Site-Specific Recombinase; DNA Integration Protein; Phage Integrase Family Site Specific Recombinase

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MCTRKVSLSSVKVRATIVEDNAGIKSQLPILLTEQGELSTVTDYLLKLEADGVSNSVMNGFLQAVSLLLDYMEANRGLFD
DPKLLFQTFSKRLYTGTIGEDGLDPSGLYWVPSSTSNVNKHIHRLTAFTDWLANKHGTASMNPLRDATPHEQRLNYAAWY
RKNQNDFLGHIEDKTVNKTIRKARTIKGRTPLTKTEDDAIAFPEKHWEDFYLNGIGGASDPRVALRDKLILLLMHGGGLR
ESEALTLWVTDVFEDPYNPDSAIVRIYNEVDGKAPNDPEVRSKNQNRETYLKEKYARIPRQRMKGTAHLGWKNRVVDHKD
NYIQVQWFPTDYGKVFMSLWKNYQKYRASIDCHHPYAFISFHHSAFGNPYTINAFHDNYANGLKRIGLEPSKAEGKDPHG
HRHNYGRRLERSGLNPLVIRRCMHHKSLDSQIPYTGKGQQEISDELTQATLQLANPESKVKALDWKALVGHGFDDIDPQG
YFTGKHPKLRGK

Sequences:

>Translated_492_residues
MCTRKVSLSSVKVRATIVEDNAGIKSQLPILLTEQGELSTVTDYLLKLEADGVSNSVMNGFLQAVSLLLDYMEANRGLFD
DPKLLFQTFSKRLYTGTIGEDGLDPSGLYWVPSSTSNVNKHIHRLTAFTDWLANKHGTASMNPLRDATPHEQRLNYAAWY
RKNQNDFLGHIEDKTVNKTIRKARTIKGRTPLTKTEDDAIAFPEKHWEDFYLNGIGGASDPRVALRDKLILLLMHGGGLR
ESEALTLWVTDVFEDPYNPDSAIVRIYNEVDGKAPNDPEVRSKNQNRETYLKEKYARIPRQRMKGTAHLGWKNRVVDHKD
NYIQVQWFPTDYGKVFMSLWKNYQKYRASIDCHHPYAFISFHHSAFGNPYTINAFHDNYANGLKRIGLEPSKAEGKDPHG
HRHNYGRRLERSGLNPLVIRRCMHHKSLDSQIPYTGKGQQEISDELTQATLQLANPESKVKALDWKALVGHGFDDIDPQG
YFTGKHPKLRGK
>Mature_492_residues
MCTRKVSLSSVKVRATIVEDNAGIKSQLPILLTEQGELSTVTDYLLKLEADGVSNSVMNGFLQAVSLLLDYMEANRGLFD
DPKLLFQTFSKRLYTGTIGEDGLDPSGLYWVPSSTSNVNKHIHRLTAFTDWLANKHGTASMNPLRDATPHEQRLNYAAWY
RKNQNDFLGHIEDKTVNKTIRKARTIKGRTPLTKTEDDAIAFPEKHWEDFYLNGIGGASDPRVALRDKLILLLMHGGGLR
ESEALTLWVTDVFEDPYNPDSAIVRIYNEVDGKAPNDPEVRSKNQNRETYLKEKYARIPRQRMKGTAHLGWKNRVVDHKD
NYIQVQWFPTDYGKVFMSLWKNYQKYRASIDCHHPYAFISFHHSAFGNPYTINAFHDNYANGLKRIGLEPSKAEGKDPHG
HRHNYGRRLERSGLNPLVIRRCMHHKSLDSQIPYTGKGQQEISDELTQATLQLANPESKVKALDWKALVGHGFDDIDPQG
YFTGKHPKLRGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56047; Mature: 56047

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTRKVSLSSVKVRATIVEDNAGIKSQLPILLTEQGELSTVTDYLLKLEADGVSNSVMNG
CCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHEECCCCCHHHHHH
FLQAVSLLLDYMEANRGLFDDPKLLFQTFSKRLYTGTIGEDGLDPSGLYWVPSSTSNVNK
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCCCCHHHH
HIHRLTAFTDWLANKHGTASMNPLRDATPHEQRLNYAAWYRKNQNDFLGHIEDKTVNKTI
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHEECCCCCCCCCCCHHHHHHHH
RKARTIKGRTPLTKTEDDAIAFPEKHWEDFYLNGIGGASDPRVALRDKLILLLMHGGGLR
HHHHHCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCHHHHCCEEEEEECCCCCC
ESEALTLWVTDVFEDPYNPDSAIVRIYNEVDGKAPNDPEVRSKNQNRETYLKEKYARIPR
CCCEEEEEEEEHHCCCCCCCHHHEEEEHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHCCH
QRMKGTAHLGWKNRVVDHKDNYIQVQWFPTDYGKVFMSLWKNYQKYRASIDCHHPYAFIS
HHCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
FHHSAFGNPYTINAFHDNYANGLKRIGLEPSKAEGKDPHGHRHNYGRRLERSGLNPLVIR
EEHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHH
RCMHHKSLDSQIPYTGKGQQEISDELTQATLQLANPESKVKALDWKALVGHGFDDIDPQG
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
YFTGKHPKLRGK
EECCCCCCCCCC
>Mature Secondary Structure
MCTRKVSLSSVKVRATIVEDNAGIKSQLPILLTEQGELSTVTDYLLKLEADGVSNSVMNG
CCCCCCCCCEEEEEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHEECCCCCHHHHHH
FLQAVSLLLDYMEANRGLFDDPKLLFQTFSKRLYTGTIGEDGLDPSGLYWVPSSTSNVNK
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCEEECCCCCCHHHH
HIHRLTAFTDWLANKHGTASMNPLRDATPHEQRLNYAAWYRKNQNDFLGHIEDKTVNKTI
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHEECCCCCCCCCCCHHHHHHHH
RKARTIKGRTPLTKTEDDAIAFPEKHWEDFYLNGIGGASDPRVALRDKLILLLMHGGGLR
HHHHHCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCHHHHCCEEEEEECCCCCC
ESEALTLWVTDVFEDPYNPDSAIVRIYNEVDGKAPNDPEVRSKNQNRETYLKEKYARIPR
CCCEEEEEEEEHHCCCCCCCHHHEEEEHHHCCCCCCCCHHCCCCCCHHHHHHHHHHHCCH
QRMKGTAHLGWKNRVVDHKDNYIQVQWFPTDYGKVFMSLWKNYQKYRASIDCHHPYAFIS
HHCCCCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
FHHSAFGNPYTINAFHDNYANGLKRIGLEPSKAEGKDPHGHRHNYGRRLERSGLNPLVIR
EEHHCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHH
RCMHHKSLDSQIPYTGKGQQEISDELTQATLQLANPESKVKALDWKALVGHGFDDIDPQG
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCC
YFTGKHPKLRGK
EECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA