| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921354
Identifier: 117921354
GI number: 117921354
Start: 3489567
End: 3489977
Strand: Direct
Name: 117921354
Synonym: Shewana3_2914
Alternate gene names: NA
Gene position: 3489567-3489977 (Clockwise)
Preceding gene: 117921353
Following gene: 117921355
Centisome position: 70.18
GC content: 44.04
Gene sequence:
>411_bases ATGTTATCAGCATTAGTGGTTGGCTTACCTATCATATTAATCAATATGTTACTGCAATCTCTTGCCACTATGTGGTGCAT CCGTTTCTACAATAAACGGCTACTAGACCACGATAGTTTAGTCGCAGGGGTATTAGGACTCTTCGGTATCACCAGCATAG TAATGCTGGGTAACCTTTTACAAATCGTCGCTTGGGGCAGCTTGTTTCTCTTCCTCGGCGAGTTCAATAACCTGCATGAT GCGATTTATCATTCTGGGGTCAACTTCGCGACCTTAGGCTATGGCGATATTGTGATGAGTGAAAAATGGAAATTATTAGG CCCAATCGAAGCGGTAAATGGCGCCCTGATGATCGGCTTATCGGGCGCATCCATGTTGGCTGTGCTACAGCAATATGTGA AGAAAAAATGA
Upstream 100 bases:
>100_bases TATTTATTGGTCGCTGGTTATGGTTGGCTATGTTTTATCGCACTGGAGCAGAAATGGCCAGCAGGCCGCCCAGCATCAGA AGCCCCCGTAGGAGAATAGA
Downstream 100 bases:
>100_bases CCGATAAAGCCTCAATGTAAGCGCTGTCTATAGTGATCCCAAGATCCGGTGGAATGATGACCCAACACACCTACAAAAAA GCCGCCTCAGTTATTATATA
Product: Ion transport 2 domain-containing protein
Products: NA
Alternate protein names: Ion Transport 2 Domain Protein; Transmembrane Protein; Voltage-Dependent Potassium Channel; Membrane Lipoprotein
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MLSALVVGLPIILINMLLQSLATMWCIRFYNKRLLDHDSLVAGVLGLFGITSIVMLGNLLQIVAWGSLFLFLGEFNNLHD AIYHSGVNFATLGYGDIVMSEKWKLLGPIEAVNGALMIGLSGASMLAVLQQYVKKK
Sequences:
>Translated_136_residues MLSALVVGLPIILINMLLQSLATMWCIRFYNKRLLDHDSLVAGVLGLFGITSIVMLGNLLQIVAWGSLFLFLGEFNNLHD AIYHSGVNFATLGYGDIVMSEKWKLLGPIEAVNGALMIGLSGASMLAVLQQYVKKK >Mature_136_residues MLSALVVGLPIILINMLLQSLATMWCIRFYNKRLLDHDSLVAGVLGLFGITSIVMLGNLLQIVAWGSLFLFLGEFNNLHD AIYHSGVNFATLGYGDIVMSEKWKLLGPIEAVNGALMIGLSGASMLAVLQQYVKKK
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14854; Mature: 14854
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSALVVGLPIILINMLLQSLATMWCIRFYNKRLLDHDSLVAGVLGLFGITSIVMLGNLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH QIVAWGSLFLFLGEFNNLHDAIYHSGVNFATLGYGDIVMSEKWKLLGPIEAVNGALMIGL HHHHHHHHHHHHHHHCHHHHHHHHCCCCEEECCCCHHHHCCCCHHHCHHHHHCCEEEEEE SGASMLAVLQQYVKKK CCHHHHHHHHHHHHCC >Mature Secondary Structure MLSALVVGLPIILINMLLQSLATMWCIRFYNKRLLDHDSLVAGVLGLFGITSIVMLGNLL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH QIVAWGSLFLFLGEFNNLHDAIYHSGVNFATLGYGDIVMSEKWKLLGPIEAVNGALMIGL HHHHHHHHHHHHHHHCHHHHHHHHCCCCEEECCCCHHHHCCCCHHHCHHHHHCCEEEEEE SGASMLAVLQQYVKKK CCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA