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The map label for this gene is lutA [H]

Identifier: 117921347

GI number: 117921347

Start: 3479116

End: 3479892

Strand: Direct

Name: lutA [H]

Synonym: Shewana3_2906

Alternate gene names: 117921347

Gene position: 3479116-3479892 (Clockwise)

Preceding gene: 117921346

Following gene: 117921348

Centisome position: 69.97

GC content: 51.35

Gene sequence:

>777_bases
ATGTCGTTCACTAACAAGAAAGAGAAAAACACAATGAAAATCGCTCTTTTCATCCCGTGTCTCGTTAACCAAATGATGCC
AGATGTGGCGATTGCCACCCTGGAATTACTGGAAAAGCTCGGACACCAAGTGATTCTACCCGCAGGCCAAACTTGCTGTG
GCCAACCTATGACCAACTCGGGTTGCTTCGATGCAGCACGCAGTACTACCTTGAAATTACTTAATGCTTTCAAGGGTGTG
GAATGTGATGCCATTGTTTGCCCTGCCGCCTCTTGTTTAGTGGCCGCCAAAGAAAACTTCCACGAGTTTGACAACAGCCC
AGAAGCCCAAGCCGTTATCGACAAACTCTATGAGCTGACCGAGTTCCTCCACGATGTCGCCCCAATCCCAGCGTTCAACA
AGCCTTTTGCCCATAAGATCAGTCTGCAACTGAGCTGCCACGGCATTCGCATGTTGAGCCTTGCCACACCGAGCGAGCAA
ATGGGTCCACGATTCAACAAGGTAGAAGCCGTGCTCGCCAATATCGCCGGAATCGACATTGTGTATCCAGACCGTCGCGA
CGAATGCTGTGGCTTTGGTGGGACTTTTGCCGTTGATGAAGGCGCCGTATCCGCCAAGATGGGTAAAGATAAGGCCCAAG
CCCACGCGGCAACGGGCGCGCAATATGTGGTTGGCTTCGACCCTTCATGCCTATTACACCTCGATGGCATGATCCGCAGA
CAACAATTGCCAATTGAAATTCGCCACATAGCGCAAGTACTTAACGCCGCGCTCTAG

Upstream 100 bases:

>100_bases
GTCATTTACTAAATTAGCGCTACTTATTTACTTAAGATAAGCCTATATTTGATCAACTACCTTAGCATTTGTGTGGACTT
TGGGGTCACAATGCAAGGCA

Downstream 100 bases:

>100_bases
GAGACCCACTATGGCATATCAACATAATCACGAGGCAACGGGTTCACAGGTTCACGCCCACAAGGCCGATATTTTCTGCC
GTGATGAAACCCGTGTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSFTNKKEKNTMKIALFIPCLVNQMMPDVAIATLELLEKLGHQVILPAGQTCCGQPMTNSGCFDAARSTTLKLLNAFKGV
ECDAIVCPAASCLVAAKENFHEFDNSPEAQAVIDKLYELTEFLHDVAPIPAFNKPFAHKISLQLSCHGIRMLSLATPSEQ
MGPRFNKVEAVLANIAGIDIVYPDRRDECCGFGGTFAVDEGAVSAKMGKDKAQAHAATGAQYVVGFDPSCLLHLDGMIRR
QQLPIEIRHIAQVLNAAL

Sequences:

>Translated_258_residues
MSFTNKKEKNTMKIALFIPCLVNQMMPDVAIATLELLEKLGHQVILPAGQTCCGQPMTNSGCFDAARSTTLKLLNAFKGV
ECDAIVCPAASCLVAAKENFHEFDNSPEAQAVIDKLYELTEFLHDVAPIPAFNKPFAHKISLQLSCHGIRMLSLATPSEQ
MGPRFNKVEAVLANIAGIDIVYPDRRDECCGFGGTFAVDEGAVSAKMGKDKAQAHAATGAQYVVGFDPSCLLHLDGMIRR
QQLPIEIRHIAQVLNAAL
>Mature_257_residues
SFTNKKEKNTMKIALFIPCLVNQMMPDVAIATLELLEKLGHQVILPAGQTCCGQPMTNSGCFDAARSTTLKLLNAFKGVE
CDAIVCPAASCLVAAKENFHEFDNSPEAQAVIDKLYELTEFLHDVAPIPAFNKPFAHKISLQLSCHGIRMLSLATPSEQM
GPRFNKVEAVLANIAGIDIVYPDRRDECCGFGGTFAVDEGAVSAKMGKDKAQAHAATGAQYVVGFDPSCLLHLDGMIRRQ
QLPIEIRHIAQVLNAAL

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutA/ykgE family [H]

Homologues:

Organism=Escherichia coli, GI1786497, Length=247, Percent_Identity=29.9595141700405, Blast_Score=117, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004017
- InterPro:   IPR022822 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 27945; Mature: 27814

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTNKKEKNTMKIALFIPCLVNQMMPDVAIATLELLEKLGHQVILPAGQTCCGQPMTNS
CCCCCCCCCCEEEEEEHHHHHHHHHCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
GCFDAARSTTLKLLNAFKGVECDAIVCPAASCLVAAKENFHEFDNSPEAQAVIDKLYELT
CCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EFLHDVAPIPAFNKPFAHKISLQLSCHGIRMLSLATPSEQMGPRFNKVEAVLANIAGIDI
HHHHHHCCCCCCCCCCCEEEEEEEEECCEEEEEECCCHHHHCCCHHHHHHHHHHHCCCEE
VYPDRRDECCGFGGTFAVDEGAVSAKMGKDKAQAHAATGAQYVVGFDPSCLLHLDGMIRR
ECCCCCCHHCCCCCCEEECCCCHHHHCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
QQLPIEIRHIAQVLNAAL
HCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SFTNKKEKNTMKIALFIPCLVNQMMPDVAIATLELLEKLGHQVILPAGQTCCGQPMTNS
CCCCCCCCCEEEEEEHHHHHHHHHCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCC
GCFDAARSTTLKLLNAFKGVECDAIVCPAASCLVAAKENFHEFDNSPEAQAVIDKLYELT
CCHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
EFLHDVAPIPAFNKPFAHKISLQLSCHGIRMLSLATPSEQMGPRFNKVEAVLANIAGIDI
HHHHHHCCCCCCCCCCCEEEEEEEEECCEEEEEECCCHHHHCCCHHHHHHHHHHHCCCEE
VYPDRRDECCGFGGTFAVDEGAVSAKMGKDKAQAHAATGAQYVVGFDPSCLLHLDGMIRR
ECCCCCCHHCCCCCCEEECCCCHHHHCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHH
QQLPIEIRHIAQVLNAAL
HCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]