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The map label for this gene is lutB [H]

Identifier: 117921348

GI number: 117921348

Start: 3479903

End: 3481297

Strand: Direct

Name: lutB [H]

Synonym: Shewana3_2907

Alternate gene names: 117921348

Gene position: 3479903-3481297 (Clockwise)

Preceding gene: 117921347

Following gene: 117921349

Centisome position: 69.99

GC content: 51.97

Gene sequence:

>1395_bases
ATGGCATATCAACATAATCACGAGGCAACGGGTTCACAGGTTCACGCCCACAAGGCCGATATTTTCTGCCGTGATGAAAC
CCGTGTTGACTGGCACTCAAAAGCCCTTTGGGTGCTGCGGGAAAAACGTGACCGCGCCGCAGGCAGCTTACCCGAGTGGG
AACAACTGCGTCAGTTAGGCTCCGAAATCAAACTGCATACCTTAACCAACCTTGCACAATACCTTGAAACCTTTGAGCAA
AACTGCCTTGCAAACGGTATCAAAGTCCACTGGGCAAAGGATGGCGCTGAGCACAACCGTATCGTGCACGACATTTTAGC
TAGCCATAAAGTGAAGAAGTTAGTTAAGTCTAAATCCATGCTCACAGAGGAATGTCACCTCAATCCTTACTTAGAGCAAC
GTGGAATTGAAGTCATCGATACCGACTTGGGCGAGCGGATTATTCAGCTGGCAAAAATGCCACCTTCGCACATTGTGGTG
CCCGCCATCCACATGAAAAAAGAAGAAGTGGGCGATCTGTTCCATGACAAATTAGGCACTAAGGCAGGCGAGTCCGATCC
GCTATATTTGACCCGCGCCGCTCGTGCTCATCTGCGTGAGCAATTCCTCAGCGCCGATGCCGCCATGACAGGGGTAAACA
TGGCAATCGCCGATAAGGGCGCCGTGGTCGTTTGTACCAACGAAGGTAACGCAGATATGGGCGCGAACCTGCCCAAGTTA
CAGTTGCATTCAATGGGTATCGACAAAATTGTCCCCGATATCGACAGCGCCGCCGTGTTACTGCGCACCCTAGCGCGTAA
CGCAACGGGTCAACCCGTCACCACCTATAGCGCCTTCTACCGTGGTCCACAGGTCGATGGTGAGATGCATGTGATCATCG
TCGATAACGGCCGTACTGAAATGCTCAAGGATAAAATCCTTGCCGAATCATTGAAATGTATTCGCTGCGGTGGCTGTTTA
AATACTTGCCCTGTGTATCGCCGCTCCGGTGGTTACAGTTACAACTACACCATTCCCGGCCCTATTGGGATTGCCGTAGG
TGCCAAGCATGATGACACTAACTCCATCGCTTGGGCCTGTACCCTGTGTGGCAGCTGTACCTATGTTTGCCCGACTAAGG
TGCCGCTCGATAAGATTATTTTCCACCACAGACGCCTTAAGGCTGAAGCCGGACAACTCCCCTACGGCAAAAACGGTTAT
ATGCCACTAGTGGGTAAATTTATGGCAAGCACGACCCTGCTCAATTGCTCAATGGGCGCGGCTCGCACCGCACTGCGTAT
TTTGCCCGGCAGTCTGCTCAAGCCCTTTAGCGGCGCTTGGGGTAAATACCGTGAACTGCCCGTCGCCCCCAACTCCAGCT
TCGAAGCTTGGTTTAAGAAACACAGGAGCCTATAA

Upstream 100 bases:

>100_bases
TGCCTATTACACCTCGATGGCATGATCCGCAGACAACAATTGCCAATTGAAATTCGCCACATAGCGCAAGTACTTAACGC
CGCGCTCTAGGAGACCCACT

Downstream 100 bases:

>100_bases
GATGTCTAGTAAGCACGAAATTCTCAATGCGCTCAAACTGTCGGCTTTAACAAACCATCCTATGCCAAGCATCGATGTCG
CCCCGCGGGTAGAAGATCTG

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MAYQHNHEATGSQVHAHKADIFCRDETRVDWHSKALWVLREKRDRAAGSLPEWEQLRQLGSEIKLHTLTNLAQYLETFEQ
NCLANGIKVHWAKDGAEHNRIVHDILASHKVKKLVKSKSMLTEECHLNPYLEQRGIEVIDTDLGERIIQLAKMPPSHIVV
PAIHMKKEEVGDLFHDKLGTKAGESDPLYLTRAARAHLREQFLSADAAMTGVNMAIADKGAVVVCTNEGNADMGANLPKL
QLHSMGIDKIVPDIDSAAVLLRTLARNATGQPVTTYSAFYRGPQVDGEMHVIIVDNGRTEMLKDKILAESLKCIRCGGCL
NTCPVYRRSGGYSYNYTIPGPIGIAVGAKHDDTNSIAWACTLCGSCTYVCPTKVPLDKIIFHHRRLKAEAGQLPYGKNGY
MPLVGKFMASTTLLNCSMGAARTALRILPGSLLKPFSGAWGKYRELPVAPNSSFEAWFKKHRSL

Sequences:

>Translated_464_residues
MAYQHNHEATGSQVHAHKADIFCRDETRVDWHSKALWVLREKRDRAAGSLPEWEQLRQLGSEIKLHTLTNLAQYLETFEQ
NCLANGIKVHWAKDGAEHNRIVHDILASHKVKKLVKSKSMLTEECHLNPYLEQRGIEVIDTDLGERIIQLAKMPPSHIVV
PAIHMKKEEVGDLFHDKLGTKAGESDPLYLTRAARAHLREQFLSADAAMTGVNMAIADKGAVVVCTNEGNADMGANLPKL
QLHSMGIDKIVPDIDSAAVLLRTLARNATGQPVTTYSAFYRGPQVDGEMHVIIVDNGRTEMLKDKILAESLKCIRCGGCL
NTCPVYRRSGGYSYNYTIPGPIGIAVGAKHDDTNSIAWACTLCGSCTYVCPTKVPLDKIIFHHRRLKAEAGQLPYGKNGY
MPLVGKFMASTTLLNCSMGAARTALRILPGSLLKPFSGAWGKYRELPVAPNSSFEAWFKKHRSL
>Mature_463_residues
AYQHNHEATGSQVHAHKADIFCRDETRVDWHSKALWVLREKRDRAAGSLPEWEQLRQLGSEIKLHTLTNLAQYLETFEQN
CLANGIKVHWAKDGAEHNRIVHDILASHKVKKLVKSKSMLTEECHLNPYLEQRGIEVIDTDLGERIIQLAKMPPSHIVVP
AIHMKKEEVGDLFHDKLGTKAGESDPLYLTRAARAHLREQFLSADAAMTGVNMAIADKGAVVVCTNEGNADMGANLPKLQ
LHSMGIDKIVPDIDSAAVLLRTLARNATGQPVTTYSAFYRGPQVDGEMHVIIVDNGRTEMLKDKILAESLKCIRCGGCLN
TCPVYRRSGGYSYNYTIPGPIGIAVGAKHDDTNSIAWACTLCGSCTYVCPTKVPLDKIIFHHRRLKAEAGQLPYGKNGYM
PLVGKFMASTTLLNCSMGAARTALRILPGSLLKPFSGAWGKYRELPVAPNSSFEAWFKKHRSL

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source. Has probably a role as an electron transporter during oxidation of L-lactate [H]

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=434, Percent_Identity=38.9400921658986, Blast_Score=313, Evalue=1e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR022825 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 51369; Mature: 51238

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYQHNHEATGSQVHAHKADIFCRDETRVDWHSKALWVLREKRDRAAGSLPEWEQLRQLG
CCCCCCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SEIKLHTLTNLAQYLETFEQNCLANGIKVHWAKDGAEHNRIVHDILASHKVKKLVKSKSM
HHEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
LTEECHLNPYLEQRGIEVIDTDLGERIIQLAKMPPSHIVVPAIHMKKEEVGDLFHDKLGT
HHHHHCCCHHHHHCCCEEEEHHHHHHHHHHHCCCCCCEEECHHHHCHHHHHHHHHHHHCC
KAGESDPLYLTRAARAHLREQFLSADAAMTGVNMAIADKGAVVVCTNEGNADMGANLPKL
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCCCCCE
QLHSMGIDKIVPDIDSAAVLLRTLARNATGQPVTTYSAFYRGPQVDGEMHVIIVDNGRTE
EHHHCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCEEEEEECCCCHH
MLKDKILAESLKCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIAVGAKHDDTNSIAWAC
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEE
TLCGSCTYVCPTKVPLDKIIFHHRRLKAEAGQLPYGKNGYMPLVGKFMASTTLLNCSMGA
EHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEECCCHH
ARTALRILPGSLLKPFSGAWGKYRELPVAPNSSFEAWFKKHRSL
HHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
AYQHNHEATGSQVHAHKADIFCRDETRVDWHSKALWVLREKRDRAAGSLPEWEQLRQLG
CCCCCCCCCCCEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
SEIKLHTLTNLAQYLETFEQNCLANGIKVHWAKDGAEHNRIVHDILASHKVKKLVKSKSM
HHEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
LTEECHLNPYLEQRGIEVIDTDLGERIIQLAKMPPSHIVVPAIHMKKEEVGDLFHDKLGT
HHHHHCCCHHHHHCCCEEEEHHHHHHHHHHHCCCCCCEEECHHHHCHHHHHHHHHHHHCC
KAGESDPLYLTRAARAHLREQFLSADAAMTGVNMAIADKGAVVVCTNEGNADMGANLPKL
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCCCCCCCCCCE
QLHSMGIDKIVPDIDSAAVLLRTLARNATGQPVTTYSAFYRGPQVDGEMHVIIVDNGRTE
EHHHCCHHHHCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCEEEEEECCCCHH
MLKDKILAESLKCIRCGGCLNTCPVYRRSGGYSYNYTIPGPIGIAVGAKHDDTNSIAWAC
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCEEEE
TLCGSCTYVCPTKVPLDKIIFHHRRLKAEAGQLPYGKNGYMPLVGKFMASTTLLNCSMGA
EHHCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHEECCCHH
ARTALRILPGSLLKPFSGAWGKYRELPVAPNSSFEAWFKKHRSL
HHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA